RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 EPPK1P58107 5090 aaKnown RBP4.67□□□□□ -1.66
ABCA4-207ENST00000536513 SPATA8Q6RVD6 105 aa4.67□□□□□ -1.66
ABCA4-207ENST00000536513 ASB16-AS1Q495Z4 193 aa4.66□□□□□ -1.66
ABCA4-207ENST00000536513 KRTAP4-5Q9BYR2 181 aa4.64□□□□□ -1.67
ABCA4-207ENST00000536513 DMAC1Q96GE9 116 aa4.64□□□□□ -1.67
ABCA4-207ENST00000536513 ALMS1Q8TCU4 4167 aa4.64□□□□□ -1.67
ABCA4-207ENST00000536513 PKD1P98161 4303 aa4.63□□□□□ -1.67
ABCA4-207ENST00000536513 C20orf166-AS1Q96NR2 134 aa4.63□□□□□ -1.67
ABCA4-207ENST00000536513 A0A0D9SG42 100 aa4.62□□□□□ -1.67
ABCA4-207ENST00000536513 A0A1B0GU33 70 aa4.61□□□□□ -1.67
ABCA4-207ENST00000536513 KRTAP17-1Q9BYP8 105 aa4.6□□□□□ -1.67
ABCA4-207ENST00000536513 P0C880 135 aa4.55□□□□□ -1.68
ABCA4-207ENST00000536513 KRTAP25-1Q3LHN0 102 aa4.55□□□□□ -1.68
ABCA4-207ENST00000536513 KRTAP10-4P60372 401 aaPredicted RBP4.53□□□□□ -1.68
ABCA4-207ENST00000536513 CAMK2N1Q7Z7J9 78 aa4.53□□□□□ -1.68
ABCA4-207ENST00000536513 A8MUU9 505 aa4.52□□□□□ -1.69
ABCA4-207ENST00000536513 HSPG2P98160 4391 aa4.48□□□□□ -1.69
ABCA4-207ENST00000536513 LCE2CQ5TA81 110 aa4.47□□□□□ -1.69
ABCA4-207ENST00000536513 LCE2AQ5TA79 106 aaPredicted RBP4.47□□□□□ -1.69
ABCA4-207ENST00000536513 HERC2O95714 4834 aa4.45□□□□□ -1.7
ABCA4-207ENST00000536513 H1FX-AS1Q4G0G2 97 aa4.45□□□□□ -1.7
ABCA4-207ENST00000536513 KRTAP10-8P60410 259 aa4.44□□□□□ -1.7
ABCA4-207ENST00000536513 LRP2P98164 4655 aa4.42□□□□□ -1.7
ABCA4-207ENST00000536513 ABCA13Q86UQ4 5058 aa4.41□□□□□ -1.7
ABCA4-207ENST00000536513 MT1HL1P0DM35 61 aa4.41□□□□□ -1.7
ABCA4-207ENST00000536513 RPL37P61927 97 aaKnown RBP4.4□□□□□ -1.7
ABCA4-207ENST00000536513 H0YAA0 97 aa4.4□□□□□ -1.71
ABCA4-207ENST00000536513 XP32Q5T750 250 aa4.38□□□□□ -1.71
ABCA4-207ENST00000536513 LPAP08519 4548 aa4.37□□□□□ -1.71
ABCA4-207ENST00000536513 COX6B2Q6YFQ2 88 aa4.37□□□□□ -1.71
ABCA4-207ENST00000536513 C10orf95Q9H7T3 257 aa4.36□□□□□ -1.71
ABCA4-207ENST00000536513 KRTAP13-3Q3SY46 172 aa4.35□□□□□ -1.71
ABCA4-207ENST00000536513 HERC1Q15751 4861 aa4.35□□□□□ -1.71
ABCA4-207ENST00000536513 RPS29P62273 56 aaKnown RBP4.34□□□□□ -1.71
ABCA4-207ENST00000536513 LCE2BO14633 110 aa4.33□□□□□ -1.72
ABCA4-207ENST00000536513 MUC2Q02817 5179 aa4.33□□□□□ -1.72
ABCA4-207ENST00000536513 PKHD1L1Q86WI1 4243 aa4.32□□□□□ -1.72
ABCA4-207ENST00000536513 PCLOQ9Y6V0 5065 aa4.29□□□□□ -1.72
ABCA4-207ENST00000536513 BIRC6Q9NR09 4857 aa4.27□□□□□ -1.73
ABCA4-207ENST00000536513 RNF213Q63HN8 5207 aa4.27□□□□□ -1.73
ABCA4-207ENST00000536513 M0R2T5 61 aa4.22□□□□□ -1.73
ABCA4-207ENST00000536513 S4R3F8 94 aa4.21□□□□□ -1.73
ABCA4-207ENST00000536513 TNXBP22105 4242 aa4.21□□□□□ -1.73
ABCA4-207ENST00000536513 TPRXLQ17RH7 258 aa4.21□□□□□ -1.74
ABCA4-207ENST00000536513 KRTAP3-1Q9BYR8 98 aa4.18□□□□□ -1.74
ABCA4-207ENST00000536513 UBR4Q5T4S7 5183 aa4.18□□□□□ -1.74
ABCA4-207ENST00000536513 LORP23490 312 aaPredicted RBP4.17□□□□□ -1.74
ABCA4-207ENST00000536513 R4GN34 69 aa4.13□□□□□ -1.75
ABCA4-207ENST00000536513 FAT4Q6V0I7 4981 aa4.12□□□□□ -1.75
ABCA4-207ENST00000536513 KRTAP15-1Q3LI76 137 aa4.12□□□□□ -1.75
ABCA4-207ENST00000536513 M0QZ58 72 aa4.11□□□□□ -1.75
ABCA4-207ENST00000536513 KRTAP4-1Q9BYQ7 146 aa4.1□□□□□ -1.75
ABCA4-207ENST00000536513 PLAC4Q8WY50 150 aa4.05□□□□□ -1.76
ABCA4-207ENST00000536513 KRTAP13-4Q3LI77 160 aa4.04□□□□□ -1.76
ABCA4-207ENST00000536513 KRTAP12-2P59991 146 aa4.03□□□□□ -1.76
ABCA4-207ENST00000536513 KRTAP10-6P60371 365 aaPredicted RBP3.98□□□□□ -1.77
ABCA4-207ENST00000536513 HMCN2Q8NDA2 5059 aa3.96□□□□□ -1.78
ABCA4-207ENST00000536513 PRO2289Q9P1D8 64 aa3.95□□□□□ -1.78
ABCA4-207ENST00000536513 FSIP2Q5CZC0 6907 aa3.95□□□□□ -1.78
ABCA4-207ENST00000536513 KRTAP12-1P59990 96 aa3.94□□□□□ -1.78
ABCA4-207ENST00000536513 KRTAP10-10P60014 251 aa3.88□□□□□ -1.79
ABCA4-207ENST00000536513 MUC17Q685J3 4493 aa3.78□□□□□ -1.81
ABCA4-207ENST00000536513 PP632Q6XCG6 107 aa3.77□□□□□ -1.81
ABCA4-207ENST00000536513 TNP1P09430 55 aa3.75□□□□□ -1.81
ABCA4-207ENST00000536513 MT1HP80294 61 aa3.74□□□□□ -1.81
ABCA4-207ENST00000536513 USH2AO75445 5202 aa3.72□□□□□ -1.81
ABCA4-207ENST00000536513 KRTAP19-2Q3LHN2 52 aa3.69□□□□□ -1.82
ABCA4-207ENST00000536513 FLGP20930 4061 aaPredicted RBP3.68□□□□□ -1.82
ABCA4-207ENST00000536513 MT1FP04733 61 aa3.65□□□□□ -1.83
ABCA4-207ENST00000536513 INE1O15225 51 aa3.64□□□□□ -1.83
ABCA4-207ENST00000536513 MT2AP02795 61 aa3.62□□□□□ -1.83
ABCA4-207ENST00000536513 KRTAP9-8Q9BYQ0 159 aa3.54□□□□□ -1.84
ABCA4-207ENST00000536513 KRTAP19-1Q8IUB9 90 aa3.51□□□□□ -1.85
ABCA4-207ENST00000536513 KMT2DO14686 5537 aa3.47□□□□□ -1.85
ABCA4-207ENST00000536513 SPRR2GQ9BYE4 73 aa3.42□□□□□ -1.86
ABCA4-207ENST00000536513 KRTAP9-3Q9BYQ3 159 aa3.39□□□□□ -1.87
ABCA4-207ENST00000536513 MT1BP07438 61 aa3.36□□□□□ -1.87
ABCA4-207ENST00000536513 LCE5AQ5TCM9 118 aa3.35□□□□□ -1.87
ABCA4-207ENST00000536513 KRTAP19-4Q3LI73 84 aa3.33□□□□□ -1.88
ABCA4-207ENST00000536513 LCE3AQ5TA76 89 aa3.32□□□□□ -1.88
ABCA4-207ENST00000536513 KRTAP10-7P60409 375 aaPredicted RBP3.3□□□□□ -1.88
ABCA4-207ENST00000536513 MT1XP80297 61 aa3.29□□□□□ -1.88
ABCA4-207ENST00000536513 SSPOA2VEC9 5147 aa3.29□□□□□ -1.88
ABCA4-207ENST00000536513 KRTAP4-8A0A0G2JLE6 195 aa3.28□□□□□ -1.88
ABCA4-207ENST00000536513 KRTAP10-12P60413 245 aa3.28□□□□□ -1.88
ABCA4-207ENST00000536513 KRTAP4-8Q9BYQ9 185 aa3.28□□□□□ -1.88
ABCA4-207ENST00000536513 KRTAP10-5P60370 271 aa3.27□□□□□ -1.89
ABCA4-207ENST00000536513 DSTQ03001 7570 aaKnown RBP3.27□□□□□ -1.89
ABCA4-207ENST00000536513 KRTAP19-8Q3LI54 63 aa3.26□□□□□ -1.89
ABCA4-207ENST00000536513 KRTAP9-4Q9BYQ2 154 aa3.22□□□□□ -1.89
ABCA4-207ENST00000536513 KRTAP12-3P60328 96 aa3.2□□□□□ -1.9
ABCA4-207ENST00000536513 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
ABCA4-207ENST00000536513 MUC12Q9UKN1 5478 aa3.18□□□□□ -1.9
ABCA4-207ENST00000536513 SYNE2Q8WXH0 6885 aaKnown RBP3.18□□□□□ -1.9
ABCA4-207ENST00000536513 SPRR5A0A1B0GTR4 108 aa3.17□□□□□ -1.9
ABCA4-207ENST00000536513 KRTAP2-2Q9BYT5 123 aa3.16□□□□□ -1.9
ABCA4-207ENST00000536513 FCGBPQ9Y6R7 5405 aaPredicted RBP3.15□□□□□ -1.91
ABCA4-207ENST00000536513 KRTAP9-2Q9BYQ4 174 aa3.14□□□□□ -1.91
ABCA4-207ENST00000536513 KRTAP19-5Q3LI72 72 aa3.13□□□□□ -1.91
ABCA4-207ENST00000536513 CRCT1Q9UGL9 99 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms