RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 SPART-AS1P0CW21 52 aa2.15□□□□□ -2.07
MCF2-210ENST00000536274 IGLV7-43P04211 117 aa2.14□□□□□ -2.07
MCF2-210ENST00000536274 APLNQ9ULZ1 77 aa2.14□□□□□ -2.07
MCF2-210ENST00000536274 RYR1P21817 5038 aa2.14□□□□□ -2.07
MCF2-210ENST00000536274 KRTAP16-1A8MUX0 517 aa2.14□□□□□ -2.07
MCF2-210ENST00000536274 Q6ZSA8 131 aa2.14□□□□□ -2.07
MCF2-210ENST00000536274 C20orf166-AS1Q96NR2 134 aa2.14□□□□□ -2.07
MCF2-210ENST00000536274 KRTAP13-3Q3SY46 172 aa2.14□□□□□ -2.07
MCF2-210ENST00000536274 PKHD1L1Q86WI1 4243 aa2.13□□□□□ -2.07
MCF2-210ENST00000536274 IGKV2D-30A0A075B6S6 120 aa2.13□□□□□ -2.07
MCF2-210ENST00000536274 IGKV2-30P06310 120 aa2.13□□□□□ -2.07
MCF2-210ENST00000536274 TYMSOSQ8TAI1 123 aa2.13□□□□□ -2.07
MCF2-210ENST00000536274 LRP1BQ9NZR2 4599 aa2.13□□□□□ -2.07
MCF2-210ENST00000536274 KRTAP5-3Q6L8H2 238 aa2.13□□□□□ -2.07
MCF2-210ENST00000536274 PSORS1C2Q9UIG4 136 aa2.13□□□□□ -2.07
MCF2-210ENST00000536274 PKD1P98161 4303 aa2.13□□□□□ -2.07
MCF2-210ENST00000536274 A0A087WTM6 91 aa2.12□□□□□ -2.07
MCF2-210ENST00000536274 PANO1I0J062 215 aa2.12□□□□□ -2.07
MCF2-210ENST00000536274 TLX1NBP0CAT3 122 aa2.12□□□□□ -2.07
MCF2-210ENST00000536274 TPRXLQ17RH7 258 aa2.12□□□□□ -2.07
MCF2-210ENST00000536274 STAB2Q8WWQ8 2551 aa2.11□□□□□ -2.07
MCF2-210ENST00000536274 HSPG2P98160 4391 aa2.11□□□□□ -2.07
MCF2-210ENST00000536274 LY6G6CO95867 125 aa2.11□□□□□ -2.07
MCF2-210ENST00000536274 H3BNG1 76 aa2.1□□□□□ -2.07
MCF2-210ENST00000536274 DNAH8Q96JB1 4490 aa2.1□□□□□ -2.07
MCF2-210ENST00000536274 APOBP04114 4563 aaKnown RBP2.1□□□□□ -2.07
MCF2-210ENST00000536274 LINC01556Q5JQF7 62 aa2.1□□□□□ -2.07
MCF2-210ENST00000536274 KRTAP15-1Q3LI76 137 aa2.09□□□□□ -2.07
MCF2-210ENST00000536274 C14orf177Q52M58 125 aa2.09□□□□□ -2.07
MCF2-210ENST00000536274 CIRBP-AS1Q8TBR5 109 aa2.08□□□□□ -2.08
MCF2-210ENST00000536274 SPRR1BP22528 89 aa2.08□□□□□ -2.08
MCF2-210ENST00000536274 KRTAP1-5Q9BYS1 174 aa2.07□□□□□ -2.08
MCF2-210ENST00000536274 A0A0D9SG42 100 aa2.07□□□□□ -2.08
MCF2-210ENST00000536274 LUZP6Q538Z0 58 aa2.07□□□□□ -2.08
MCF2-210ENST00000536274 ABCA13Q86UQ4 5058 aa2.07□□□□□ -2.08
MCF2-210ENST00000536274 A0A1B0GU33 70 aa2.07□□□□□ -2.08
MCF2-210ENST00000536274 KIAA1109Q2LD37 5005 aa2.06□□□□□ -2.08
MCF2-210ENST00000536274 NBDYA0A0U1RRE5 68 aa2.05□□□□□ -2.08
MCF2-210ENST00000536274 DNAH5Q8TE73 4624 aa2.04□□□□□ -2.08
MCF2-210ENST00000536274 H1FX-AS1Q4G0G2 97 aa2.04□□□□□ -2.08
MCF2-210ENST00000536274 KRTAP13-1Q8IUC0 172 aa2.04□□□□□ -2.08
MCF2-210ENST00000536274 FAT1Q14517 4588 aa2.03□□□□□ -2.08
MCF2-210ENST00000536274 MYCBP2O75592 4640 aa2.02□□□□□ -2.09
MCF2-210ENST00000536274 KRTAP9-8Q9BYQ0 159 aa2.02□□□□□ -2.09
MCF2-210ENST00000536274 Q6ZRN7 208 aaPredicted RBP2.02□□□□□ -2.09
MCF2-210ENST00000536274 UBE2DNLQ8IWF7 75 aa2.02□□□□□ -2.09
MCF2-210ENST00000536274 COX6B2Q6YFQ2 88 aa2.01□□□□□ -2.09
MCF2-210ENST00000536274 KRTAP13-4Q3LI77 160 aa2.01□□□□□ -2.09
MCF2-210ENST00000536274 FAT3Q8TDW7 4589 aa2.01□□□□□ -2.09
MCF2-210ENST00000536274 K7ERS5 55 aa2□□□□□ -2.09
MCF2-210ENST00000536274 SPACA4Q8TDM5 124 aa1.99□□□□□ -2.09
MCF2-210ENST00000536274 Q5VSD8 79 aa1.99□□□□□ -2.09
MCF2-210ENST00000536274 HMCN2Q8NDA2 5059 aa1.97□□□□□ -2.09
MCF2-210ENST00000536274 TNXBP22105 4242 aa1.97□□□□□ -2.09
MCF2-210ENST00000536274 RPL37P61927 97 aaKnown RBP1.96□□□□□ -2.1
MCF2-210ENST00000536274 KRTAP10-4P60372 401 aaPredicted RBP1.96□□□□□ -2.1
MCF2-210ENST00000536274 C9orf92A6NGG3 77 aa1.95□□□□□ -2.1
MCF2-210ENST00000536274 KRTAP12-2P59991 146 aa1.95□□□□□ -2.1
MCF2-210ENST00000536274 KRTAP13-2Q52LG2 175 aa1.94□□□□□ -2.1
MCF2-210ENST00000536274 KRTAP10-1P60331 282 aa1.93□□□□□ -2.1
MCF2-210ENST00000536274 HERC1Q15751 4861 aa1.93□□□□□ -2.1
MCF2-210ENST00000536274 KRTAP10-6P60371 365 aaPredicted RBP1.93□□□□□ -2.1
MCF2-210ENST00000536274 S4R3F8 94 aa1.92□□□□□ -2.1
MCF2-210ENST00000536274 MUC17Q685J3 4493 aa1.91□□□□□ -2.1
MCF2-210ENST00000536274 MT1HL1P0DM35 61 aa1.9□□□□□ -2.11
MCF2-210ENST00000536274 KRTAP10-8P60410 259 aa1.89□□□□□ -2.11
MCF2-210ENST00000536274 PLAC4Q8WY50 150 aa1.89□□□□□ -2.11
MCF2-210ENST00000536274 KRTAP12-1P59990 96 aa1.87□□□□□ -2.11
MCF2-210ENST00000536274 UBR4Q5T4S7 5183 aa1.86□□□□□ -2.11
MCF2-210ENST00000536274 MT3P25713 68 aa1.86□□□□□ -2.11
MCF2-210ENST00000536274 KRTAP1-4P0C5Y4 121 aa1.83□□□□□ -2.12
MCF2-210ENST00000536274 LPAP08519 4548 aa1.83□□□□□ -2.12
MCF2-210ENST00000536274 RNF213Q63HN8 5207 aa1.82□□□□□ -2.12
MCF2-210ENST00000536274 SMR3BP02814 79 aaPredicted RBP1.82□□□□□ -2.12
MCF2-210ENST00000536274 LCE1AQ5T7P2 110 aa1.81□□□□□ -2.12
MCF2-210ENST00000536274 FAT4Q6V0I7 4981 aa1.8□□□□□ -2.12
MCF2-210ENST00000536274 CAMK2N1Q7Z7J9 78 aa1.8□□□□□ -2.12
MCF2-210ENST00000536274 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
MCF2-210ENST00000536274 LRP1Q07954 4544 aaKnown RBP1.8□□□□□ -2.12
MCF2-210ENST00000536274 CRCT1Q9UGL9 99 aa1.77□□□□□ -2.13
MCF2-210ENST00000536274 RPS29P62273 56 aaKnown RBP1.76□□□□□ -2.13
MCF2-210ENST00000536274 MUC5BQ9HC84 5762 aaPredicted RBP1.76□□□□□ -2.13
MCF2-210ENST00000536274 M0QZ58 72 aa1.74□□□□□ -2.13
MCF2-210ENST00000536274 LRP2P98164 4655 aa1.72□□□□□ -2.13
MCF2-210ENST00000536274 KRTAP10-7P60409 375 aaPredicted RBP1.72□□□□□ -2.13
MCF2-210ENST00000536274 R4GN34 69 aa1.72□□□□□ -2.13
MCF2-210ENST00000536274 LCE1EQ5T753 118 aa1.71□□□□□ -2.14
MCF2-210ENST00000536274 PRO2289Q9P1D8 64 aa1.71□□□□□ -2.14
MCF2-210ENST00000536274 MUC2Q02817 5179 aa1.7□□□□□ -2.14
MCF2-210ENST00000536274 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.68□□□□□ -2.14
MCF2-210ENST00000536274 KRTAP2-2Q9BYT5 123 aa1.67□□□□□ -2.14
MCF2-210ENST00000536274 SSPOA2VEC9 5147 aa1.64□□□□□ -2.15
MCF2-210ENST00000536274 KRTAP19-2Q3LHN2 52 aa1.64□□□□□ -2.15
MCF2-210ENST00000536274 SPRR5A0A1B0GTR4 108 aa1.63□□□□□ -2.15
MCF2-210ENST00000536274 MT1HP80294 61 aa1.61□□□□□ -2.15
MCF2-210ENST00000536274 PP632Q6XCG6 107 aa1.6□□□□□ -2.15
MCF2-210ENST00000536274 GPR98Q8WXG9 6306 aa1.59□□□□□ -2.15
MCF2-210ENST00000536274 FLGP20930 4061 aaPredicted RBP1.59□□□□□ -2.16
MCF2-210ENST00000536274 INE1O15225 51 aa1.58□□□□□ -2.16
MCF2-210ENST00000536274 KRTAP5-11Q6L8G4 156 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms