RNA–Protein interactions for RNA: ENST00000535170.5

ZKSCAN1-205, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 2 BASIC

Gene ZKSCAN1, Length 8,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-205ENST00000535170 CRCT1Q9UGL9 99 aa4.59□□□□□ -1.67
ZKSCAN1-205ENST00000535170 DNAH7Q8WXX0 4024 aa4.56□□□□□ -1.68
ZKSCAN1-205ENST00000535170 SPRR2GQ9BYE4 73 aa4.56□□□□□ -1.68
ZKSCAN1-205ENST00000535170 DNAH3Q8TD57 4116 aa4.54□□□□□ -1.68
ZKSCAN1-205ENST00000535170 SVEP1Q4LDE5 3571 aa4.51□□□□□ -1.69
ZKSCAN1-205ENST00000535170 CMYA5Q8N3K9 4069 aa4.5□□□□□ -1.69
ZKSCAN1-205ENST00000535170 KRTAP10-5P60370 271 aa4.48□□□□□ -1.69
ZKSCAN1-205ENST00000535170 KRTAP4-5Q9BYR2 181 aa4.47□□□□□ -1.69
ZKSCAN1-205ENST00000535170 KRTAP10-7P60409 375 aaPredicted RBP4.46□□□□□ -1.7
ZKSCAN1-205ENST00000535170 DNAH6Q9C0G6 4158 aa4.44□□□□□ -1.7
ZKSCAN1-205ENST00000535170 ZNF469Q96JG9 3925 aaPredicted RBP4.44□□□□□ -1.7
ZKSCAN1-205ENST00000535170 CSMD2Q7Z408 3487 aa4.43□□□□□ -1.7
ZKSCAN1-205ENST00000535170 CSMD3Q7Z407 3707 aa4.43□□□□□ -1.7
ZKSCAN1-205ENST00000535170 DNAH2Q9P225 4427 aa4.41□□□□□ -1.7
ZKSCAN1-205ENST00000535170 ANK2Q01484 3957 aa4.39□□□□□ -1.71
ZKSCAN1-205ENST00000535170 MT1HP80294 61 aa4.38□□□□□ -1.71
ZKSCAN1-205ENST00000535170 LYSTQ99698 3801 aa4.34□□□□□ -1.71
ZKSCAN1-205ENST00000535170 LORP23490 312 aaPredicted RBP4.33□□□□□ -1.72
ZKSCAN1-205ENST00000535170 LCE3CQ5T5A8 94 aa4.32□□□□□ -1.72
ZKSCAN1-205ENST00000535170 VPS13BQ7Z7G8 4022 aa4.31□□□□□ -1.72
ZKSCAN1-205ENST00000535170 HECTD4Q9Y4D8 3996 aa4.3□□□□□ -1.72
ZKSCAN1-205ENST00000535170 MT2AP02795 61 aa4.3□□□□□ -1.72
ZKSCAN1-205ENST00000535170 DNAH10Q8IVF4 4471 aa4.24□□□□□ -1.73
ZKSCAN1-205ENST00000535170 DNAH9Q9NYC9 4486 aa4.23□□□□□ -1.73
ZKSCAN1-205ENST00000535170 SPRR2FQ96RM1 72 aa4.23□□□□□ -1.73
ZKSCAN1-205ENST00000535170 FAT2Q9NYQ8 4349 aa4.22□□□□□ -1.73
ZKSCAN1-205ENST00000535170 FRAS1Q86XX4 4008 aa4.2□□□□□ -1.74
ZKSCAN1-205ENST00000535170 DYNC2H1Q8NCM8 4307 aaKnown RBP4.19□□□□□ -1.74
ZKSCAN1-205ENST00000535170 KRTAP19-5Q3LI72 72 aa4.19□□□□□ -1.74
ZKSCAN1-205ENST00000535170 KRTAP19-8Q3LI54 63 aa4.17□□□□□ -1.74
ZKSCAN1-205ENST00000535170 KMT2AQ03164 3969 aa4.17□□□□□ -1.74
ZKSCAN1-205ENST00000535170 KRTAP4-1Q9BYQ7 146 aa4.15□□□□□ -1.75
ZKSCAN1-205ENST00000535170 DNAH11Q96DT5 4516 aa4.13□□□□□ -1.75
ZKSCAN1-205ENST00000535170 MT1FP04733 61 aa4.13□□□□□ -1.75
ZKSCAN1-205ENST00000535170 PRKDCP78527 4128 aaKnown RBP4.09□□□□□ -1.75
ZKSCAN1-205ENST00000535170 VPS13DQ5THJ4 4388 aa4.09□□□□□ -1.75
ZKSCAN1-205ENST00000535170 KRTAP12-4P60329 112 aa4.08□□□□□ -1.76
ZKSCAN1-205ENST00000535170 DNAH17Q9UFH2 4485 aa4.03□□□□□ -1.76
ZKSCAN1-205ENST00000535170 DNAH5Q8TE73 4624 aa4.02□□□□□ -1.77
ZKSCAN1-205ENST00000535170 SPRR2EP22531 72 aa4□□□□□ -1.77
ZKSCAN1-205ENST00000535170 SPRR2BP35325 72 aa4□□□□□ -1.77
ZKSCAN1-205ENST00000535170 SPRR2AP35326 72 aa4□□□□□ -1.77
ZKSCAN1-205ENST00000535170 LRP1Q07954 4544 aaKnown RBP3.99□□□□□ -1.77
ZKSCAN1-205ENST00000535170 LCE2BO14633 110 aa3.99□□□□□ -1.77
ZKSCAN1-205ENST00000535170 MT1GP13640 62 aa3.98□□□□□ -1.77
ZKSCAN1-205ENST00000535170 FLGP20930 4061 aaPredicted RBP3.98□□□□□ -1.77
ZKSCAN1-205ENST00000535170 KRTAP19-1Q8IUB9 90 aa3.94□□□□□ -1.78
ZKSCAN1-205ENST00000535170 DYNC1H1Q14204 4646 aaKnown RBP3.93□□□□□ -1.78
ZKSCAN1-205ENST00000535170 SPRR2DP22532 72 aa3.93□□□□□ -1.78
ZKSCAN1-205ENST00000535170 PKHD1L1Q86WI1 4243 aa3.89□□□□□ -1.79
ZKSCAN1-205ENST00000535170 SPRR5A0A1B0GTR4 108 aa3.89□□□□□ -1.79
ZKSCAN1-205ENST00000535170 MT1XP80297 61 aa3.89□□□□□ -1.79
ZKSCAN1-205ENST00000535170 PLECQ15149 4684 aaKnown RBP3.88□□□□□ -1.79
ZKSCAN1-205ENST00000535170 DNAH8Q96JB1 4490 aa3.88□□□□□ -1.79
ZKSCAN1-205ENST00000535170 STARD9Q9P2P6 4700 aa3.85□□□□□ -1.79
ZKSCAN1-205ENST00000535170 LCE3DQ9BYE3 92 aa3.81□□□□□ -1.8
ZKSCAN1-205ENST00000535170 LCE3BQ5TA77 95 aa3.81□□□□□ -1.8
ZKSCAN1-205ENST00000535170 LRP1BQ9NZR2 4599 aa3.81□□□□□ -1.8
ZKSCAN1-205ENST00000535170 MT1LQ93083 61 aa3.8□□□□□ -1.8
ZKSCAN1-205ENST00000535170 PKHD1P08F94 4074 aa3.79□□□□□ -1.8
ZKSCAN1-205ENST00000535170 KRTAP9-8Q9BYQ0 159 aa3.78□□□□□ -1.8
ZKSCAN1-205ENST00000535170 LCE3EQ5T5B0 92 aa3.78□□□□□ -1.8
ZKSCAN1-205ENST00000535170 MT1BP07438 61 aa3.76□□□□□ -1.81
ZKSCAN1-205ENST00000535170 APOBP04114 4563 aaKnown RBP3.74□□□□□ -1.81
ZKSCAN1-205ENST00000535170 KRTAP19-3Q7Z4W3 81 aa3.74□□□□□ -1.81
ZKSCAN1-205ENST00000535170 KRTAP9-3Q9BYQ3 159 aa3.72□□□□□ -1.81
ZKSCAN1-205ENST00000535170 HERC1Q15751 4861 aa3.71□□□□□ -1.82
ZKSCAN1-205ENST00000535170 SACSQ9NZJ4 4579 aa3.69□□□□□ -1.82
ZKSCAN1-205ENST00000535170 PKD1P98161 4303 aa3.69□□□□□ -1.82
ZKSCAN1-205ENST00000535170 LCE2CQ5TA81 110 aa3.68□□□□□ -1.82
ZKSCAN1-205ENST00000535170 HSPG2P98160 4391 aa3.67□□□□□ -1.82
ZKSCAN1-205ENST00000535170 FAT1Q14517 4588 aa3.65□□□□□ -1.83
ZKSCAN1-205ENST00000535170 MT1EP04732 61 aa3.63□□□□□ -1.83
ZKSCAN1-205ENST00000535170 MT3P25713 68 aa3.63□□□□□ -1.83
ZKSCAN1-205ENST00000535170 FAT3Q8TDW7 4589 aa3.62□□□□□ -1.83
ZKSCAN1-205ENST00000535170 LCE2DQ5TA82 110 aaPredicted RBP3.57□□□□□ -1.84
ZKSCAN1-205ENST00000535170 KRTAP19-6Q3LI70 58 aa3.55□□□□□ -1.84
ZKSCAN1-205ENST00000535170 RYR2Q92736 4967 aa3.53□□□□□ -1.84
ZKSCAN1-205ENST00000535170 RYR1P21817 5038 aa3.51□□□□□ -1.85
ZKSCAN1-205ENST00000535170 MT1MQ8N339 61 aa3.51□□□□□ -1.85
ZKSCAN1-205ENST00000535170 MYCBP2O75592 4640 aa3.49□□□□□ -1.85
ZKSCAN1-205ENST00000535170 TNXBP22105 4242 aa3.48□□□□□ -1.85
ZKSCAN1-205ENST00000535170 KRTAP4-8A0A0G2JLE6 195 aa3.46□□□□□ -1.86
ZKSCAN1-205ENST00000535170 KRTAP4-8Q9BYQ9 185 aa3.46□□□□□ -1.86
ZKSCAN1-205ENST00000535170 BIRC6Q9NR09 4857 aa3.44□□□□□ -1.86
ZKSCAN1-205ENST00000535170 DNHD1Q96M86 4753 aa3.41□□□□□ -1.86
ZKSCAN1-205ENST00000535170 RYR3Q15413 4870 aa3.38□□□□□ -1.87
ZKSCAN1-205ENST00000535170 LCE1AQ5T7P2 110 aa3.38□□□□□ -1.87
ZKSCAN1-205ENST00000535170 KRTAP19-2Q3LHN2 52 aa3.36□□□□□ -1.87
ZKSCAN1-205ENST00000535170 MT1AP04731 61 aa3.33□□□□□ -1.88
ZKSCAN1-205ENST00000535170 KRTAP9-2Q9BYQ4 174 aa3.3□□□□□ -1.88
ZKSCAN1-205ENST00000535170 PCLOQ9Y6V0 5065 aa3.29□□□□□ -1.88
ZKSCAN1-205ENST00000535170 PRM1P04553 51 aa3.29□□□□□ -1.88
ZKSCAN1-205ENST00000535170 KRTAP17-1Q9BYP8 105 aa3.28□□□□□ -1.89
ZKSCAN1-205ENST00000535170 MT4P47944 62 aa3.27□□□□□ -1.89
ZKSCAN1-205ENST00000535170 LCE4AQ5TA78 99 aa3.24□□□□□ -1.89
ZKSCAN1-205ENST00000535170 KMT2CQ8NEZ4 4911 aaKnown RBP3.22□□□□□ -1.89
ZKSCAN1-205ENST00000535170 KRTAP2-3P0C7H8 128 aa3.22□□□□□ -1.89
ZKSCAN1-205ENST00000535170 LCE1DQ5T752 114 aa3.22□□□□□ -1.89
ZKSCAN1-205ENST00000535170 KRTAP2-4Q9BYR9 128 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms