RNA–Protein interactions for RNA: ENST00000534300.5

AMBRA1-212, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-212ENST00000534300 DNAH3Q8TD57 4116 aa5.72□□□□□ -1.49
AMBRA1-212ENST00000534300 KRTAP3-2Q9BYR7 98 aa5.54□□□□□ -1.52
AMBRA1-212ENST00000534300 PLECQ15149 4684 aaKnown RBP5.53□□□□□ -1.52
AMBRA1-212ENST00000534300 STARD9Q9P2P6 4700 aa5.52□□□□□ -1.53
AMBRA1-212ENST00000534300 DNAH11Q96DT5 4516 aa5.47□□□□□ -1.53
AMBRA1-212ENST00000534300 KRTAP3-3Q9BYR6 98 aa5.46□□□□□ -1.53
AMBRA1-212ENST00000534300 VPS13DQ5THJ4 4388 aa5.46□□□□□ -1.54
AMBRA1-212ENST00000534300 DNAH1Q9P2D7 4330 aa5.44□□□□□ -1.54
AMBRA1-212ENST00000534300 DYNC2H1Q8NCM8 4307 aaKnown RBP5.43□□□□□ -1.54
AMBRA1-212ENST00000534300 DNAH7Q8WXX0 4024 aa5.41□□□□□ -1.54
AMBRA1-212ENST00000534300 KRTAP23-1A1A580 65 aa5.4□□□□□ -1.55
AMBRA1-212ENST00000534300 DNAH5Q8TE73 4624 aa5.39□□□□□ -1.55
AMBRA1-212ENST00000534300 CSMD3Q7Z407 3707 aa5.38□□□□□ -1.55
AMBRA1-212ENST00000534300 RYR2Q92736 4967 aa5.38□□□□□ -1.55
AMBRA1-212ENST00000534300 SACSQ9NZJ4 4579 aa5.37□□□□□ -1.55
AMBRA1-212ENST00000534300 DNAH10Q8IVF4 4471 aa5.36□□□□□ -1.55
AMBRA1-212ENST00000534300 KMT2CQ8NEZ4 4911 aaKnown RBP5.34□□□□□ -1.55
AMBRA1-212ENST00000534300 KRTAP10-12P60413 245 aa5.31□□□□□ -1.56
AMBRA1-212ENST00000534300 DNAH6Q9C0G6 4158 aa5.3□□□□□ -1.56
AMBRA1-212ENST00000534300 KMT2AQ03164 3969 aa5.28□□□□□ -1.56
AMBRA1-212ENST00000534300 DNAH17Q9UFH2 4485 aa5.27□□□□□ -1.57
AMBRA1-212ENST00000534300 KRTAP12-3P60328 96 aa5.26□□□□□ -1.57
AMBRA1-212ENST00000534300 HYDINQ4G0P3 5121 aa5.24□□□□□ -1.57
AMBRA1-212ENST00000534300 DYNC1H1Q14204 4646 aaKnown RBP5.23□□□□□ -1.57
AMBRA1-212ENST00000534300 BIRC6Q9NR09 4857 aa5.22□□□□□ -1.57
AMBRA1-212ENST00000534300 RYR3Q15413 4870 aa5.22□□□□□ -1.57
AMBRA1-212ENST00000534300 DNAH2Q9P225 4427 aa5.2□□□□□ -1.58
AMBRA1-212ENST00000534300 KIAA1109Q2LD37 5005 aa5.18□□□□□ -1.58
AMBRA1-212ENST00000534300 LRP1BQ9NZR2 4599 aa5.18□□□□□ -1.58
AMBRA1-212ENST00000534300 LYSTQ99698 3801 aa5.16□□□□□ -1.58
AMBRA1-212ENST00000534300 RYR1P21817 5038 aa5.15□□□□□ -1.58
AMBRA1-212ENST00000534300 LCE3AQ5TA76 89 aa5.14□□□□□ -1.59
AMBRA1-212ENST00000534300 FAT2Q9NYQ8 4349 aa5.11□□□□□ -1.59
AMBRA1-212ENST00000534300 EPPK1P58107 5090 aaKnown RBP5.1□□□□□ -1.59
AMBRA1-212ENST00000534300 MT1HP80294 61 aa5.08□□□□□ -1.6
AMBRA1-212ENST00000534300 CRCT1Q9UGL9 99 aa5.08□□□□□ -1.6
AMBRA1-212ENST00000534300 KRTAP17-1Q9BYP8 105 aa5.06□□□□□ -1.6
AMBRA1-212ENST00000534300 FAT1Q14517 4588 aa5.06□□□□□ -1.6
AMBRA1-212ENST00000534300 PKD1P98161 4303 aa5.05□□□□□ -1.6
AMBRA1-212ENST00000534300 LORP23490 312 aaPredicted RBP5.03□□□□□ -1.6
AMBRA1-212ENST00000534300 APOBP04114 4563 aaKnown RBP5.03□□□□□ -1.6
AMBRA1-212ENST00000534300 PKHD1P08F94 4074 aa5.03□□□□□ -1.6
AMBRA1-212ENST00000534300 KRTAP4-1Q9BYQ7 146 aa5.03□□□□□ -1.6
AMBRA1-212ENST00000534300 HECTD4Q9Y4D8 3996 aa5.01□□□□□ -1.61
AMBRA1-212ENST00000534300 FRAS1Q86XX4 4008 aa5□□□□□ -1.61
AMBRA1-212ENST00000534300 DNAH8Q96JB1 4490 aa5□□□□□ -1.61
AMBRA1-212ENST00000534300 HERC2O95714 4834 aa5□□□□□ -1.61
AMBRA1-212ENST00000534300 HSPG2P98160 4391 aa4.97□□□□□ -1.61
AMBRA1-212ENST00000534300 KRTAP10-5P60370 271 aa4.94□□□□□ -1.62
AMBRA1-212ENST00000534300 MT2AP02795 61 aa4.92□□□□□ -1.62
AMBRA1-212ENST00000534300 KRTAP8-1Q8IUC2 63 aa4.9□□□□□ -1.62
AMBRA1-212ENST00000534300 VPS13BQ7Z7G8 4022 aa4.86□□□□□ -1.63
AMBRA1-212ENST00000534300 ABCA13Q86UQ4 5058 aa4.84□□□□□ -1.63
AMBRA1-212ENST00000534300 LRP1Q07954 4544 aaKnown RBP4.8□□□□□ -1.64
AMBRA1-212ENST00000534300 MT1FP04733 61 aa4.79□□□□□ -1.64
AMBRA1-212ENST00000534300 PCLOQ9Y6V0 5065 aa4.78□□□□□ -1.64
AMBRA1-212ENST00000534300 MYCBP2O75592 4640 aa4.78□□□□□ -1.64
AMBRA1-212ENST00000534300 SPRR2GQ9BYE4 73 aa4.78□□□□□ -1.64
AMBRA1-212ENST00000534300 FAT3Q8TDW7 4589 aa4.73□□□□□ -1.65
AMBRA1-212ENST00000534300 HERC1Q15751 4861 aa4.7□□□□□ -1.66
AMBRA1-212ENST00000534300 SPRR2FQ96RM1 72 aa4.63□□□□□ -1.67
AMBRA1-212ENST00000534300 PKHD1L1Q86WI1 4243 aa4.63□□□□□ -1.67
AMBRA1-212ENST00000534300 KRTAP19-4Q3LI73 84 aa4.6□□□□□ -1.67
AMBRA1-212ENST00000534300 LCE3CQ5T5A8 94 aa4.58□□□□□ -1.68
AMBRA1-212ENST00000534300 TNXBP22105 4242 aa4.56□□□□□ -1.68
AMBRA1-212ENST00000534300 KRTAP19-8Q3LI54 63 aa4.55□□□□□ -1.68
AMBRA1-212ENST00000534300 KRTAP19-5Q3LI72 72 aa4.52□□□□□ -1.69
AMBRA1-212ENST00000534300 LRP2P98164 4655 aa4.51□□□□□ -1.69
AMBRA1-212ENST00000534300 LCE2CQ5TA81 110 aa4.51□□□□□ -1.69
AMBRA1-212ENST00000534300 KRTAP9-8Q9BYQ0 159 aa4.5□□□□□ -1.69
AMBRA1-212ENST00000534300 HMCN2Q8NDA2 5059 aa4.49□□□□□ -1.69
AMBRA1-212ENST00000534300 KRTAP9-2Q9BYQ4 174 aa4.48□□□□□ -1.69
AMBRA1-212ENST00000534300 KRTAP10-7P60409 375 aaPredicted RBP4.46□□□□□ -1.69
AMBRA1-212ENST00000534300 SPRR2EP22531 72 aa4.45□□□□□ -1.7
AMBRA1-212ENST00000534300 SPRR2BP35325 72 aa4.45□□□□□ -1.7
AMBRA1-212ENST00000534300 SPRR2AP35326 72 aa4.45□□□□□ -1.7
AMBRA1-212ENST00000534300 KRTAP19-1Q8IUB9 90 aa4.45□□□□□ -1.7
AMBRA1-212ENST00000534300 KRTAP9-3Q9BYQ3 159 aa4.42□□□□□ -1.7
AMBRA1-212ENST00000534300 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
AMBRA1-212ENST00000534300 LCE2DQ5TA82 110 aaPredicted RBP4.4□□□□□ -1.7
AMBRA1-212ENST00000534300 LPAP08519 4548 aa4.38□□□□□ -1.71
AMBRA1-212ENST00000534300 KRTAP9-6A0A140TA67 174 aa4.38□□□□□ -1.71
AMBRA1-212ENST00000534300 MT1BP07438 61 aa4.34□□□□□ -1.71
AMBRA1-212ENST00000534300 UBR4Q5T4S7 5183 aa4.33□□□□□ -1.72
AMBRA1-212ENST00000534300 SPRR2DP22532 72 aa4.33□□□□□ -1.72
AMBRA1-212ENST00000534300 KRTAP12-4P60329 112 aa4.33□□□□□ -1.72
AMBRA1-212ENST00000534300 LCE2AQ5TA79 106 aaPredicted RBP4.33□□□□□ -1.72
AMBRA1-212ENST00000534300 KRTAP19-2Q3LHN2 52 aa4.31□□□□□ -1.72
AMBRA1-212ENST00000534300 RNF213Q63HN8 5207 aa4.3□□□□□ -1.72
AMBRA1-212ENST00000534300 LCE2BO14633 110 aa4.27□□□□□ -1.73
AMBRA1-212ENST00000534300 MT1XP80297 61 aa4.26□□□□□ -1.73
AMBRA1-212ENST00000534300 MUC17Q685J3 4493 aa4.23□□□□□ -1.73
AMBRA1-212ENST00000534300 KRTAP19-6Q3LI70 58 aa4.23□□□□□ -1.73
AMBRA1-212ENST00000534300 LCE3BQ5TA77 95 aa4.17□□□□□ -1.74
AMBRA1-212ENST00000534300 FAT4Q6V0I7 4981 aa4.17□□□□□ -1.74
AMBRA1-212ENST00000534300 MT1GP13640 62 aa4.15□□□□□ -1.74
AMBRA1-212ENST00000534300 LCE3DQ9BYE3 92 aa4.09□□□□□ -1.75
AMBRA1-212ENST00000534300 MUC2Q02817 5179 aa4.09□□□□□ -1.75
AMBRA1-212ENST00000534300 LCE3EQ5T5B0 92 aa4.06□□□□□ -1.76
AMBRA1-212ENST00000534300 KRTAP9-7A8MTY7 169 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms