RNA–Protein interactions for RNA: ENST00000534070.5

CHEK1-216, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHEK1, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-216ENST00000534070 LCE4AQ5TA78 99 aa3.34□□□□□ -1.87
CHEK1-216ENST00000534070 KRTAP13-3Q3SY46 172 aa3.33□□□□□ -1.88
CHEK1-216ENST00000534070 Q96NJ1 140 aa3.33□□□□□ -1.88
CHEK1-216ENST00000534070 KRTAP19-4Q3LI73 84 aa3.33□□□□□ -1.88
CHEK1-216ENST00000534070 UQCR11O14957 56 aa3.32□□□□□ -1.88
CHEK1-216ENST00000534070 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
CHEK1-216ENST00000534070 MEGF8Q7Z7M0 2845 aa3.31□□□□□ -1.88
CHEK1-216ENST00000534070 RYR1P21817 5038 aa3.3□□□□□ -1.88
CHEK1-216ENST00000534070 SPRR1BP22528 89 aa3.3□□□□□ -1.88
CHEK1-216ENST00000534070 ACYP2P14621 99 aa3.3□□□□□ -1.88
CHEK1-216ENST00000534070 A0A1B0GU69 56 aa3.3□□□□□ -1.88
CHEK1-216ENST00000534070 KRTAP9-6A0A140TA67 174 aa3.28□□□□□ -1.88
CHEK1-216ENST00000534070 KRTAP9-7A8MTY7 169 aa3.28□□□□□ -1.88
CHEK1-216ENST00000534070 HERC2O95714 4834 aa3.28□□□□□ -1.88
CHEK1-216ENST00000534070 SMR3BP02814 79 aaPredicted RBP3.27□□□□□ -1.89
CHEK1-216ENST00000534070 BIRC6Q9NR09 4857 aa3.27□□□□□ -1.89
CHEK1-216ENST00000534070 H3BNG1 76 aa3.26□□□□□ -1.89
CHEK1-216ENST00000534070 APLNQ9ULZ1 77 aa3.26□□□□□ -1.89
CHEK1-216ENST00000534070 Q6ZRN7 208 aaPredicted RBP3.25□□□□□ -1.89
CHEK1-216ENST00000534070 KMT2CQ8NEZ4 4911 aaKnown RBP3.24□□□□□ -1.89
CHEK1-216ENST00000534070 SPINK1P00995 79 aa3.24□□□□□ -1.89
CHEK1-216ENST00000534070 MRPL34Q9BQ48 92 aaKnown RBP3.24□□□□□ -1.89
CHEK1-216ENST00000534070 SSBP3-AS1Q7Z2R9 100 aa3.19□□□□□ -1.9
CHEK1-216ENST00000534070 CRIPTQ9P021 101 aa3.19□□□□□ -1.9
CHEK1-216ENST00000534070 KRTAP13-2Q52LG2 175 aa3.18□□□□□ -1.9
CHEK1-216ENST00000534070 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
CHEK1-216ENST00000534070 FLGP20930 4061 aaPredicted RBP3.18□□□□□ -1.9
CHEK1-216ENST00000534070 H0YAA0 97 aa3.18□□□□□ -1.9
CHEK1-216ENST00000534070 C9orf92A6NGG3 77 aa3.16□□□□□ -1.9
CHEK1-216ENST00000534070 Q6ZSA8 131 aa3.15□□□□□ -1.9
CHEK1-216ENST00000534070 KRTAP13-1Q8IUC0 172 aa3.15□□□□□ -1.91
CHEK1-216ENST00000534070 KRTAP10-1P60331 282 aa3.12□□□□□ -1.91
CHEK1-216ENST00000534070 EPPK1P58107 5090 aaKnown RBP3.11□□□□□ -1.91
CHEK1-216ENST00000534070 ABCA13Q86UQ4 5058 aa3.11□□□□□ -1.91
CHEK1-216ENST00000534070 KRTAP10-6P60371 365 aaPredicted RBP3.1□□□□□ -1.91
CHEK1-216ENST00000534070 KRTAP1-4P0C5Y4 121 aa3.09□□□□□ -1.92
CHEK1-216ENST00000534070 INE1O15225 51 aa3.05□□□□□ -1.92
CHEK1-216ENST00000534070 H1FX-AS1Q4G0G2 97 aa3.05□□□□□ -1.92
CHEK1-216ENST00000534070 XP32Q5T750 250 aa3.05□□□□□ -1.92
CHEK1-216ENST00000534070 KRTAP2-2Q9BYT5 123 aa3.04□□□□□ -1.92
CHEK1-216ENST00000534070 MYCBP2O75592 4640 aa3.03□□□□□ -1.92
CHEK1-216ENST00000534070 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
CHEK1-216ENST00000534070 PCLOQ9Y6V0 5065 aa3.01□□□□□ -1.93
CHEK1-216ENST00000534070 A0A1B0GVY2 172 aa3□□□□□ -1.93
CHEK1-216ENST00000534070 KIAA1109Q2LD37 5005 aa2.99□□□□□ -1.93
CHEK1-216ENST00000534070 PLAC4Q8WY50 150 aa2.97□□□□□ -1.93
CHEK1-216ENST00000534070 KRTAP9-3Q9BYQ3 159 aa2.97□□□□□ -1.93
CHEK1-216ENST00000534070 A0A0D9SG42 100 aa2.96□□□□□ -1.94
CHEK1-216ENST00000534070 LRP2P98164 4655 aa2.96□□□□□ -1.94
CHEK1-216ENST00000534070 LCE1AQ5T7P2 110 aa2.96□□□□□ -1.94
CHEK1-216ENST00000534070 COX6B2Q6YFQ2 88 aa2.96□□□□□ -1.94
CHEK1-216ENST00000534070 KRTAP10-4P60372 401 aaPredicted RBP2.95□□□□□ -1.94
CHEK1-216ENST00000534070 KRTAP19-1Q8IUB9 90 aa2.94□□□□□ -1.94
CHEK1-216ENST00000534070 LRP1Q07954 4544 aaKnown RBP2.94□□□□□ -1.94
CHEK1-216ENST00000534070 RPL37P61927 97 aaKnown RBP2.93□□□□□ -1.94
CHEK1-216ENST00000534070 C10orf95Q9H7T3 257 aa2.93□□□□□ -1.94
CHEK1-216ENST00000534070 KRTAP17-1Q9BYP8 105 aa2.92□□□□□ -1.94
CHEK1-216ENST00000534070 PP632Q6XCG6 107 aa2.89□□□□□ -1.95
CHEK1-216ENST00000534070 KRTAP13-4Q3LI77 160 aa2.88□□□□□ -1.95
CHEK1-216ENST00000534070 Q5VSD8 79 aa2.86□□□□□ -1.95
CHEK1-216ENST00000534070 HMCN2Q8NDA2 5059 aa2.86□□□□□ -1.95
CHEK1-216ENST00000534070 HERC1Q15751 4861 aa2.84□□□□□ -1.96
CHEK1-216ENST00000534070 KRTAP12-1P59990 96 aa2.84□□□□□ -1.96
CHEK1-216ENST00000534070 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
CHEK1-216ENST00000534070 S4R3F8 94 aa2.82□□□□□ -1.96
CHEK1-216ENST00000534070 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
CHEK1-216ENST00000534070 KRTAP12-2P59991 146 aa2.8□□□□□ -1.96
CHEK1-216ENST00000534070 LOC100996750A0A140TA64 210 aa2.77□□□□□ -1.97
CHEK1-216ENST00000534070 KRTAP4-6Q9BYQ5 205 aa2.77□□□□□ -1.97
CHEK1-216ENST00000534070 MT3P25713 68 aa2.76□□□□□ -1.97
CHEK1-216ENST00000534070 KRTAP4-5Q9BYR2 181 aa2.75□□□□□ -1.97
CHEK1-216ENST00000534070 RPS29P62273 56 aaKnown RBP2.72□□□□□ -1.97
CHEK1-216ENST00000534070 LPAP08519 4548 aa2.72□□□□□ -1.97
CHEK1-216ENST00000534070 KRTAP10-12P60413 245 aa2.72□□□□□ -1.97
CHEK1-216ENST00000534070 MUC2Q02817 5179 aa2.71□□□□□ -1.98
CHEK1-216ENST00000534070 SPRR5A0A1B0GTR4 108 aa2.69□□□□□ -1.98
CHEK1-216ENST00000534070 LCE1DQ5T752 114 aa2.68□□□□□ -1.98
CHEK1-216ENST00000534070 M0QZ58 72 aa2.66□□□□□ -1.98
CHEK1-216ENST00000534070 KRTAP10-10P60014 251 aa2.65□□□□□ -1.98
CHEK1-216ENST00000534070 KRTAP19-2Q3LHN2 52 aa2.65□□□□□ -1.98
CHEK1-216ENST00000534070 KRTAP4-12Q9BQ66 201 aa2.64□□□□□ -1.99
CHEK1-216ENST00000534070 UBR4Q5T4S7 5183 aa2.62□□□□□ -1.99
CHEK1-216ENST00000534070 FAT4Q6V0I7 4981 aa2.62□□□□□ -1.99
CHEK1-216ENST00000534070 MT1HL1P0DM35 61 aa2.61□□□□□ -1.99
CHEK1-216ENST00000534070 KRTAP9-8Q9BYQ0 159 aa2.6□□□□□ -1.99
CHEK1-216ENST00000534070 M0R2T5 61 aa2.6□□□□□ -1.99
CHEK1-216ENST00000534070 RNF213Q63HN8 5207 aa2.6□□□□□ -1.99
CHEK1-216ENST00000534070 LCE3DQ9BYE3 92 aa2.59□□□□□ -1.99
CHEK1-216ENST00000534070 KRTAP6-3Q3LI67 103 aa2.57□□□□□ -2
CHEK1-216ENST00000534070 KRTAP4-1Q9BYQ7 146 aa2.53□□□□□ -2
CHEK1-216ENST00000534070 FSIP2Q5CZC0 6907 aa2.52□□□□□ -2.01
CHEK1-216ENST00000534070 KRTAP10-7P60409 375 aaPredicted RBP2.51□□□□□ -2.01
CHEK1-216ENST00000534070 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.48□□□□□ -2.01
CHEK1-216ENST00000534070 KRTAP9-2Q9BYQ4 174 aa2.48□□□□□ -2.01
CHEK1-216ENST00000534070 KRTAP4-8Q9BYQ9 185 aa2.46□□□□□ -2.02
CHEK1-216ENST00000534070 LCE3BQ5TA77 95 aa2.45□□□□□ -2.02
CHEK1-216ENST00000534070 OBSCNQ5VST9 7968 aa2.39□□□□□ -2.03
CHEK1-216ENST00000534070 KRTAP12-4P60329 112 aa2.36□□□□□ -2.03
CHEK1-216ENST00000534070 USH2AO75445 5202 aa2.36□□□□□ -2.03
CHEK1-216ENST00000534070 TNP1P09430 55 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms