RNA–Protein interactions for RNA: ENST00000534070.5

CHEK1-216, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHEK1, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-216ENST00000534070 CHIC1Q5VXU3 224 aa13.72□□□□□ -0.21
CHEK1-216ENST00000534070 SLC24A1O60721 1099 aa13.46□□□□□ -0.25
CHEK1-216ENST00000534070 EHMT2Q96KQ7 1210 aa13.21□□□□□ -0.29
CHEK1-216ENST00000534070 AEBP2Q6ZN18 517 aaPredicted RBP13.16□□□□□ -0.3
CHEK1-216ENST00000534070 PLPPR3Q6T4P5 718 aa12.76□□□□□ -0.37
CHEK1-216ENST00000534070 PHF23Q9BUL5 403 aaPredicted RBP12.55□□□□□ -0.4
CHEK1-216ENST00000534070 RTN4Q9NQC3 1192 aaKnown RBP12.49□□□□□ -0.41
CHEK1-216ENST00000534070 KCNA4P22459 653 aa12.17□□□□□ -0.46
CHEK1-216ENST00000534070 CSRNP3Q8WYN3 585 aa12.15□□□□□ -0.46
CHEK1-216ENST00000534070 NISCHQ9Y2I1 1504 aa12.12□□□□□ -0.47
CHEK1-216ENST00000534070 PRKCSHP14314 528 aaPredicted RBP11.99□□□□□ -0.49
CHEK1-216ENST00000534070 AMER1Q5JTC6 1135 aaPredicted RBP11.89□□□□□ -0.51
CHEK1-216ENST00000534070 NCBP3Q53F19 620 aaKnown RBP11.87□□□□□ -0.51
CHEK1-216ENST00000534070 DAXXQ9UER7 740 aaPredicted RBP11.84□□□□□ -0.51
CHEK1-216ENST00000534070 CCDC180Q9P1Z9 1646 aa11.7□□□□□ -0.54
CHEK1-216ENST00000534070 SLC4A1APQ9BWU0 796 aaKnown RBP11.56□□□□□ -0.56
CHEK1-216ENST00000534070 TIMELESSQ9UNS1 1208 aa11.55□□□□□ -0.56
CHEK1-216ENST00000534070 ADRA2BP18089 450 aa11.47□□□□□ -0.57
CHEK1-216ENST00000534070 TULP1O00294 542 aaPredicted RBP11.39□□□□□ -0.59
CHEK1-216ENST00000534070 TAOK2Q9UL54 1235 aa11.37□□□□□ -0.59
CHEK1-216ENST00000534070 ZBTB22O15209 634 aa11.3□□□□□ -0.6
CHEK1-216ENST00000534070 TPRNQ4KMQ1 711 aa11.3□□□□□ -0.6
CHEK1-216ENST00000534070 ARXQ96QS3 562 aa11.2□□□□□ -0.62
CHEK1-216ENST00000534070 BCANQ96GW7 911 aa11.13□□□□□ -0.63
CHEK1-216ENST00000534070 HAP1P54257 671 aaPredicted RBP11.11□□□□□ -0.63
CHEK1-216ENST00000534070 PLCB2Q00722 1185 aa11.09□□□□□ -0.63
CHEK1-216ENST00000534070 MYO15BQ96JP2 1530 aa11.02□□□□□ -0.64
CHEK1-216ENST00000534070 KLHL34Q8N239 644 aa11□□□□□ -0.65
CHEK1-216ENST00000534070 HOMEZQ8IX15 550 aa10.96□□□□□ -0.65
CHEK1-216ENST00000534070 PODXL2Q9NZ53 605 aa10.96□□□□□ -0.65
CHEK1-216ENST00000534070 FKBP8Q14318 412 aa10.93□□□□□ -0.66
CHEK1-216ENST00000534070 APLP2Q06481 763 aa10.93□□□□□ -0.66
CHEK1-216ENST00000534070 RANGAP1P46060 587 aaPredicted RBP10.91□□□□□ -0.66
CHEK1-216ENST00000534070 GTF3C3Q9Y5Q9 886 aa10.91□□□□□ -0.66
CHEK1-216ENST00000534070 NPM3O75607 178 aaKnown RBP10.88□□□□□ -0.67
CHEK1-216ENST00000534070 DCAF1Q9Y4B6 1507 aa10.84□□□□□ -0.67
CHEK1-216ENST00000534070 PPP6R1Q9UPN7 881 aa10.8□□□□□ -0.68
CHEK1-216ENST00000534070 FBLN2P98095 1184 aa10.76□□□□□ -0.69
CHEK1-216ENST00000534070 KDM2AQ9Y2K7 1162 aa10.76□□□□□ -0.69
CHEK1-216ENST00000534070 UNC13AQ9UPW8 1703 aa10.76□□□□□ -0.69
CHEK1-216ENST00000534070 DCAF8L2P0C7V8 631 aa10.72□□□□□ -0.69
CHEK1-216ENST00000534070 ERICH6Q7L0X2 663 aa10.71□□□□□ -0.7
CHEK1-216ENST00000534070 PELP1Q8IZL8 1130 aaKnown RBP10.68□□□□□ -0.7
CHEK1-216ENST00000534070 SUPT5HO00267 1087 aaKnown RBP10.67□□□□□ -0.7
CHEK1-216ENST00000534070 TMEM132AQ24JP5 1023 aa10.65□□□□□ -0.7
CHEK1-216ENST00000534070 C14orf37Q86TY3 774 aa10.64□□□□□ -0.71
CHEK1-216ENST00000534070 SHROOM4Q9ULL8 1493 aa10.61□□□□□ -0.71
CHEK1-216ENST00000534070 PPP4R3CPQ6ZMV5 832 aa10.59□□□□□ -0.71
CHEK1-216ENST00000534070 NPM2Q86SE8 214 aaKnown RBP10.59□□□□□ -0.71
CHEK1-216ENST00000534070 VSIG10Q8N0Z9 540 aa10.55□□□□□ -0.72
CHEK1-216ENST00000534070 TRIM26Q12899 539 aaPredicted RBP10.54□□□□□ -0.72
CHEK1-216ENST00000534070 TTBK1Q5TCY1 1321 aaPredicted RBP10.53□□□□□ -0.72
CHEK1-216ENST00000534070 UBTFP17480 764 aaKnown RBP10.5□□□□□ -0.73
CHEK1-216ENST00000534070 EIF5BO60841 1220 aaKnown RBP10.47□□□□□ -0.73
CHEK1-216ENST00000534070 SENP3Q9H4L4 574 aaPredicted RBP10.45□□□□□ -0.74
CHEK1-216ENST00000534070 FOXD4L1Q9NU39 408 aa10.42□□□□□ -0.74
CHEK1-216ENST00000534070 NACADO15069 1562 aa10.4□□□□□ -0.74
CHEK1-216ENST00000534070 HRCP23327 699 aa10.39□□□□□ -0.75
CHEK1-216ENST00000534070 PLEKHG5O94827 1062 aa10.36□□□□□ -0.75
CHEK1-216ENST00000534070 MYT1Q01538 1121 aa10.36□□□□□ -0.75
CHEK1-216ENST00000534070 ZCCHC6Q5VYS8 1495 aaKnown RBP10.35□□□□□ -0.75
CHEK1-216ENST00000534070 CFAP44Q96MT7 982 aa10.33□□□□□ -0.76
CHEK1-216ENST00000534070 LOC105371045A0A1W2PR82 267 aa10.32□□□□□ -0.76
CHEK1-216ENST00000534070 PAXIP1Q6ZW49 1069 aaPredicted RBP10.3□□□□□ -0.76
CHEK1-216ENST00000534070 BICRAQ9NZM4 1560 aa10.3□□□□□ -0.76
CHEK1-216ENST00000534070 TSHZ2Q9NRE2 1034 aa10.27□□□□□ -0.77
CHEK1-216ENST00000534070 TRHP20396 242 aaPredicted RBP10.19□□□□□ -0.78
CHEK1-216ENST00000534070 NPM1P06748 294 aaKnown RBP eCLIP10.17□□□□□ -0.78
CHEK1-216ENST00000534070 NBR1Q14596 966 aa10.17□□□□□ -0.78
CHEK1-216ENST00000534070 RB1CC1Q8TDY2 1594 aa10.15□□□□□ -0.78
CHEK1-216ENST00000534070 FBXO3Q9UK99 471 aa10.14□□□□□ -0.79
CHEK1-216ENST00000534070 PEG3Q9GZU2 1588 aa10.13□□□□□ -0.79
CHEK1-216ENST00000534070 ARID3AQ99856 593 aa10.13□□□□□ -0.79
CHEK1-216ENST00000534070 PKD2Q13563 968 aa10.11□□□□□ -0.79
CHEK1-216ENST00000534070 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.04□□□□□ -0.8
CHEK1-216ENST00000534070 PRDM2Q13029 1718 aa10.02□□□□□ -0.8
CHEK1-216ENST00000534070 IGSF3O75054 1194 aa10□□□□□ -0.81
CHEK1-216ENST00000534070 IFNLR1Q8IU57 520 aaPredicted RBP9.96□□□□□ -0.82
CHEK1-216ENST00000534070 BBXQ8WY36 941 aaPredicted RBP9.93□□□□□ -0.82
CHEK1-216ENST00000534070 FOXD1Q16676 465 aa9.9□□□□□ -0.82
CHEK1-216ENST00000534070 CHMP4AQ9BY43 222 aa9.9□□□□□ -0.83
CHEK1-216ENST00000534070 NECTIN2Q92692 538 aa9.87□□□□□ -0.83
CHEK1-216ENST00000534070 SPRYD3Q8NCJ5 442 aa9.87□□□□□ -0.83
CHEK1-216ENST00000534070 BRPF1P55201 1214 aaPredicted RBP9.86□□□□□ -0.83
CHEK1-216ENST00000534070 C1orf115Q9H7X2 142 aa9.84□□□□□ -0.83
CHEK1-216ENST00000534070 VASPP50552 380 aaPredicted RBP9.82□□□□□ -0.84
CHEK1-216ENST00000534070 ARID3CA6NKF2 412 aa9.82□□□□□ -0.84
CHEK1-216ENST00000534070 DHX37Q8IY37 1157 aaKnown RBP9.81□□□□□ -0.84
CHEK1-216ENST00000534070 SMARCA2P51531 1590 aa9.81□□□□□ -0.84
CHEK1-216ENST00000534070 ZNF428Q96B54 188 aa9.81□□□□□ -0.84
CHEK1-216ENST00000534070 SLC4A2P04920 1241 aa9.79□□□□□ -0.84
CHEK1-216ENST00000534070 CNKSR2Q8WXI2 1034 aa9.79□□□□□ -0.84
CHEK1-216ENST00000534070 CCDC9Q9Y3X0 531 aaKnown RBP9.78□□□□□ -0.84
CHEK1-216ENST00000534070 SAMD1Q6SPF0 538 aaPredicted RBP9.78□□□□□ -0.84
CHEK1-216ENST00000534070 RGL2O15211 777 aa9.76□□□□□ -0.85
CHEK1-216ENST00000534070 CDK11BP21127 795 aaKnown RBP9.75□□□□□ -0.85
CHEK1-216ENST00000534070 CDK11AQ9UQ88 783 aaPredicted RBP9.75□□□□□ -0.85
CHEK1-216ENST00000534070 ABCC9O60706 1549 aa9.72□□□□□ -0.85
CHEK1-216ENST00000534070 ECM2O94769 699 aaPredicted RBP9.72□□□□□ -0.85
CHEK1-216ENST00000534070 ATF5Q9Y2D1 282 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms