RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 TEP1Q99973 2627 aaKnown RBP1.32□□□□□ -2.2
C11orf54-213ENST00000533585 NSD1Q96L73 2696 aaPredicted RBP1.32□□□□□ -2.2
C11orf54-213ENST00000533585 ITPR2Q14571 2701 aa1.31□□□□□ -2.2
C11orf54-213ENST00000533585 SONP18583 2426 aaKnown RBP1.31□□□□□ -2.2
C11orf54-213ENST00000533585 USP24Q9UPU5 2620 aa1.31□□□□□ -2.2
C11orf54-213ENST00000533585 PDZD2O15018 2839 aa1.31□□□□□ -2.2
C11orf54-213ENST00000533585 NBPF19A0A087WUL8 3843 aa1.3□□□□□ -2.2
C11orf54-213ENST00000533585 CSMD2Q7Z408 3487 aa1.3□□□□□ -2.2
C11orf54-213ENST00000533585 RPS29P62273 56 aaKnown RBP1.3□□□□□ -2.2
C11orf54-213ENST00000533585 ATRQ13535 2644 aa1.29□□□□□ -2.2
C11orf54-213ENST00000533585 OTOGQ6ZRI0 2925 aa1.28□□□□□ -2.2
C11orf54-213ENST00000533585 MMP24-AS1A0A0U1RRL7 71 aa1.28□□□□□ -2.2
C11orf54-213ENST00000533585 DEFB4AO15263 64 aa1.28□□□□□ -2.2
C11orf54-213ENST00000533585 ACANP16112 2415 aa1.28□□□□□ -2.2
C11orf54-213ENST00000533585 AKAP9Q99996 3911 aa1.28□□□□□ -2.21
C11orf54-213ENST00000533585 MEGF8Q7Z7M0 2845 aa1.27□□□□□ -2.21
C11orf54-213ENST00000533585 A0A096LNI7 61 aa1.27□□□□□ -2.21
C11orf54-213ENST00000533585 TENM4Q6N022 2769 aa1.27□□□□□ -2.21
C11orf54-213ENST00000533585 HIVEP1P15822 2718 aa1.26□□□□□ -2.21
C11orf54-213ENST00000533585 SPINK1P00995 79 aa1.26□□□□□ -2.21
C11orf54-213ENST00000533585 F8P00451 2351 aa1.26□□□□□ -2.21
C11orf54-213ENST00000533585 ZNF469Q96JG9 3925 aaPredicted RBP1.25□□□□□ -2.21
C11orf54-213ENST00000533585 ALMS1Q8TCU4 4167 aa1.25□□□□□ -2.21
C11orf54-213ENST00000533585 PRLHP81277 87 aa1.25□□□□□ -2.21
C11orf54-213ENST00000533585 LCE1CQ5T751 118 aa1.25□□□□□ -2.21
C11orf54-213ENST00000533585 LCE1BQ5T7P3 118 aa1.25□□□□□ -2.21
C11orf54-213ENST00000533585 TENM1Q9UKZ4 2725 aa1.25□□□□□ -2.21
C11orf54-213ENST00000533585 MAST4O15021 2626 aa1.25□□□□□ -2.21
C11orf54-213ENST00000533585 FASNP49327 2511 aaKnown RBP1.25□□□□□ -2.21
C11orf54-213ENST00000533585 SPINK6Q6UWN8 80 aa1.24□□□□□ -2.21
C11orf54-213ENST00000533585 NBEAL1Q6ZS30 2694 aa1.24□□□□□ -2.21
C11orf54-213ENST00000533585 PKD1L1Q8TDX9 2849 aa1.24□□□□□ -2.21
C11orf54-213ENST00000533585 SMR3AQ99954 134 aa1.23□□□□□ -2.21
C11orf54-213ENST00000533585 CUBNO60494 3623 aa1.23□□□□□ -2.21
C11orf54-213ENST00000533585 KRTAP5-8O75690 187 aa1.22□□□□□ -2.21
C11orf54-213ENST00000533585 FLNBO75369 2602 aaKnown RBP1.22□□□□□ -2.21
C11orf54-213ENST00000533585 TENM2Q9NT68 2774 aa1.22□□□□□ -2.21
C11orf54-213ENST00000533585 COL6A5A8TX70 2615 aa1.21□□□□□ -2.22
C11orf54-213ENST00000533585 TRRAPQ9Y4A5 3859 aa1.21□□□□□ -2.22
C11orf54-213ENST00000533585 HECTD1Q9ULT8 2610 aa1.21□□□□□ -2.22
C11orf54-213ENST00000533585 STAB2Q8WWQ8 2551 aa1.21□□□□□ -2.22
C11orf54-213ENST00000533585 STAB1Q9NY15 2570 aa1.21□□□□□ -2.22
C11orf54-213ENST00000533585 ANK3Q12955 4377 aaKnown RBP1.2□□□□□ -2.22
C11orf54-213ENST00000533585 NOTCH1P46531 2555 aa1.2□□□□□ -2.22
C11orf54-213ENST00000533585 ANK2Q01484 3957 aa1.2□□□□□ -2.22
C11orf54-213ENST00000533585 MGAM2Q2M2H8 2515 aa1.2□□□□□ -2.22
C11orf54-213ENST00000533585 SRRM2Q9UQ35 2752 aaKnown RBP1.19□□□□□ -2.22
C11orf54-213ENST00000533585 TENM3Q9P273 2699 aa1.19□□□□□ -2.22
C11orf54-213ENST00000533585 COL7A1Q02388 2944 aa1.18□□□□□ -2.22
C11orf54-213ENST00000533585 DNAH3Q8TD57 4116 aa1.18□□□□□ -2.22
C11orf54-213ENST00000533585 TGP01266 2768 aa1.17□□□□□ -2.22
C11orf54-213ENST00000533585 S4R3F8 94 aa1.15□□□□□ -2.23
C11orf54-213ENST00000533585 M0QZ58 72 aa1.14□□□□□ -2.23
C11orf54-213ENST00000533585 LYSTQ99698 3801 aa1.14□□□□□ -2.23
C11orf54-213ENST00000533585 DNAH1Q9P2D7 4330 aa1.14□□□□□ -2.23
C11orf54-213ENST00000533585 DYNC2H1Q8NCM8 4307 aaKnown RBP1.13□□□□□ -2.23
C11orf54-213ENST00000533585 HECTD4Q9Y4D8 3996 aa1.13□□□□□ -2.23
C11orf54-213ENST00000533585 KRTAP19-3Q7Z4W3 81 aa1.12□□□□□ -2.23
C11orf54-213ENST00000533585 CSMD3Q7Z407 3707 aa1.12□□□□□ -2.23
C11orf54-213ENST00000533585 PRKDCP78527 4128 aaKnown RBP1.11□□□□□ -2.23
C11orf54-213ENST00000533585 CMYA5Q8N3K9 4069 aa1.11□□□□□ -2.23
C11orf54-213ENST00000533585 HUWE1Q7Z6Z7 4374 aaKnown RBP1.11□□□□□ -2.23
C11orf54-213ENST00000533585 DNAH7Q8WXX0 4024 aa1.1□□□□□ -2.23
C11orf54-213ENST00000533585 FBN3Q75N90 2809 aa1.09□□□□□ -2.23
C11orf54-213ENST00000533585 VPS13DQ5THJ4 4388 aa1.09□□□□□ -2.23
C11orf54-213ENST00000533585 FRAS1Q86XX4 4008 aa1.08□□□□□ -2.24
C11orf54-213ENST00000533585 KRTAP2-3P0C7H8 128 aa1.08□□□□□ -2.24
C11orf54-213ENST00000533585 KRTAP2-4Q9BYR9 128 aa1.08□□□□□ -2.24
C11orf54-213ENST00000533585 KRTAP2-1Q9BYU5 128 aa1.08□□□□□ -2.24
C11orf54-213ENST00000533585 DNAH9Q9NYC9 4486 aa1.08□□□□□ -2.24
C11orf54-213ENST00000533585 DNAH6Q9C0G6 4158 aa1.08□□□□□ -2.24
C11orf54-213ENST00000533585 DNAH10Q8IVF4 4471 aa1.07□□□□□ -2.24
C11orf54-213ENST00000533585 VPS13BQ7Z7G8 4022 aa1.07□□□□□ -2.24
C11orf54-213ENST00000533585 KMT2AQ03164 3969 aa1.06□□□□□ -2.24
C11orf54-213ENST00000533585 C9orf92A6NGG3 77 aa1.06□□□□□ -2.24
C11orf54-213ENST00000533585 M0R2T5 61 aa1.06□□□□□ -2.24
C11orf54-213ENST00000533585 DNAH2Q9P225 4427 aa1.06□□□□□ -2.24
C11orf54-213ENST00000533585 DMBT1Q9UGM3 2413 aaPredicted RBP1.06□□□□□ -2.24
C11orf54-213ENST00000533585 KRTAP5-7Q6L8G8 165 aa1.05□□□□□ -2.24
C11orf54-213ENST00000533585 PLECQ15149 4684 aaKnown RBP1.05□□□□□ -2.24
C11orf54-213ENST00000533585 DNAH8Q96JB1 4490 aa1.04□□□□□ -2.24
C11orf54-213ENST00000533585 DNAH17Q9UFH2 4485 aa1.04□□□□□ -2.24
C11orf54-213ENST00000533585 PKD1P98161 4303 aa1.02□□□□□ -2.25
C11orf54-213ENST00000533585 DNAH11Q96DT5 4516 aa1.02□□□□□ -2.25
C11orf54-213ENST00000533585 STARD9Q9P2P6 4700 aa1.01□□□□□ -2.25
C11orf54-213ENST00000533585 PKHD1P08F94 4074 aa1.01□□□□□ -2.25
C11orf54-213ENST00000533585 PKHD1L1Q86WI1 4243 aa1.01□□□□□ -2.25
C11orf54-213ENST00000533585 SMR3BP02814 79 aaPredicted RBP1.01□□□□□ -2.25
C11orf54-213ENST00000533585 TNP1P09430 55 aa1.01□□□□□ -2.25
C11orf54-213ENST00000533585 LRP1BQ9NZR2 4599 aa1.01□□□□□ -2.25
C11orf54-213ENST00000533585 MUC19Q7Z5P9 8384 aa0.99□□□□□ -2.25
C11orf54-213ENST00000533585 FAT2Q9NYQ8 4349 aa0.99□□□□□ -2.25
C11orf54-213ENST00000533585 DNAH5Q8TE73 4624 aa0.97□□□□□ -2.25
C11orf54-213ENST00000533585 MT1HL1P0DM35 61 aa0.97□□□□□ -2.25
C11orf54-213ENST00000533585 SACSQ9NZJ4 4579 aa0.96□□□□□ -2.26
C11orf54-213ENST00000533585 TNXBP22105 4242 aa0.96□□□□□ -2.26
C11orf54-213ENST00000533585 APOBP04114 4563 aaKnown RBP0.95□□□□□ -2.26
C11orf54-213ENST00000533585 PRM1P04553 51 aa0.94□□□□□ -2.26
C11orf54-213ENST00000533585 SPRR2GQ9BYE4 73 aa0.93□□□□□ -2.26
C11orf54-213ENST00000533585 HSPG2P98160 4391 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms