RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 ATP11AUNQ6ZP68 121 aa6.67□□□□□ -1.34
CHD7-211ENST00000532149 C9orf92A6NGG3 77 aa6.66□□□□□ -1.34
CHD7-211ENST00000532149 RETNLBQ9BQ08 111 aa6.65□□□□□ -1.34
CHD7-211ENST00000532149 TNXBP22105 4242 aa6.65□□□□□ -1.35
CHD7-211ENST00000532149 CHKB-CPT1BH3BT56 60 aa6.64□□□□□ -1.35
CHD7-211ENST00000532149 MT1HL1P0DM35 61 aa6.64□□□□□ -1.35
CHD7-211ENST00000532149 C4orf26Q17RF5 130 aa6.63□□□□□ -1.35
CHD7-211ENST00000532149 SPTSSBQ8NFR3 76 aa6.63□□□□□ -1.35
CHD7-211ENST00000532149 MPLKIPQ8TAP9 179 aa6.62□□□□□ -1.35
CHD7-211ENST00000532149 FAT3Q8TDW7 4589 aa6.61□□□□□ -1.35
CHD7-211ENST00000532149 RPL37P61927 97 aaKnown RBP6.61□□□□□ -1.35
CHD7-211ENST00000532149 LINC01558Q9Y6Z2 57 aa6.6□□□□□ -1.35
CHD7-211ENST00000532149 TPRXLQ17RH7 258 aa6.59□□□□□ -1.35
CHD7-211ENST00000532149 SPINK7P58062 85 aa6.58□□□□□ -1.36
CHD7-211ENST00000532149 DMBT1Q9UGM3 2413 aaPredicted RBP6.56□□□□□ -1.36
CHD7-211ENST00000532149 PRR15LQ9BU68 103 aa6.56□□□□□ -1.36
CHD7-211ENST00000532149 KIAA1109Q2LD37 5005 aa6.55□□□□□ -1.36
CHD7-211ENST00000532149 LRP1Q07954 4544 aaKnown RBP6.54□□□□□ -1.36
CHD7-211ENST00000532149 COX6B2Q6YFQ2 88 aa6.5□□□□□ -1.37
CHD7-211ENST00000532149 PRO0628Q9UI54 55 aa6.48□□□□□ -1.37
CHD7-211ENST00000532149 EPPK1P58107 5090 aaKnown RBP6.47□□□□□ -1.37
CHD7-211ENST00000532149 PSPHP1O15172 72 aa6.46□□□□□ -1.38
CHD7-211ENST00000532149 Q5VV11 94 aa6.46□□□□□ -1.38
CHD7-211ENST00000532149 SEC61GP60059 68 aa6.44□□□□□ -1.38
CHD7-211ENST00000532149 A0A1B0GU69 56 aa6.43□□□□□ -1.38
CHD7-211ENST00000532149 MYCBP2O75592 4640 aa6.41□□□□□ -1.38
CHD7-211ENST00000532149 SEC61BP60468 96 aaKnown RBP6.4□□□□□ -1.38
CHD7-211ENST00000532149 BRK1Q8WUW1 75 aa6.4□□□□□ -1.38
CHD7-211ENST00000532149 SVIPQ8NHG7 77 aa6.39□□□□□ -1.39
CHD7-211ENST00000532149 A6NED7 52 aa6.37□□□□□ -1.39
CHD7-211ENST00000532149 RBM12B-AS1Q9P1G2 102 aa6.36□□□□□ -1.39
CHD7-211ENST00000532149 CDC42SE1Q9NRR8 79 aa6.34□□□□□ -1.39
CHD7-211ENST00000532149 UQCR11O14957 56 aa6.33□□□□□ -1.4
CHD7-211ENST00000532149 BIRC6Q9NR09 4857 aa6.32□□□□□ -1.4
CHD7-211ENST00000532149 H1FX-AS1Q4G0G2 97 aa6.3□□□□□ -1.4
CHD7-211ENST00000532149 HERC2O95714 4834 aa6.29□□□□□ -1.4
CHD7-211ENST00000532149 KRTAP15-1Q3LI76 137 aa6.26□□□□□ -1.41
CHD7-211ENST00000532149 S4R3F8 94 aa6.26□□□□□ -1.41
CHD7-211ENST00000532149 SPATA8Q6RVD6 105 aa6.24□□□□□ -1.41
CHD7-211ENST00000532149 LCA10Q71F78 164 aa6.21□□□□□ -1.42
CHD7-211ENST00000532149 MIR22HGQ0VDD5 57 aa6.2□□□□□ -1.42
CHD7-211ENST00000532149 ABCA13Q86UQ4 5058 aa6.19□□□□□ -1.42
CHD7-211ENST00000532149 A0A1B0GU33 70 aa6.17□□□□□ -1.42
CHD7-211ENST00000532149 KRTAP23-1A1A580 65 aa6.17□□□□□ -1.42
CHD7-211ENST00000532149 CSAG1Q6PB30 78 aa6.17□□□□□ -1.42
CHD7-211ENST00000532149 LRP2P98164 4655 aa6.13□□□□□ -1.43
CHD7-211ENST00000532149 PMAIP1Q13794 54 aa6.12□□□□□ -1.43
CHD7-211ENST00000532149 H0YAA0 97 aa6.11□□□□□ -1.43
CHD7-211ENST00000532149 K7ERS5 55 aa6.05□□□□□ -1.44
CHD7-211ENST00000532149 MUC17Q685J3 4493 aa6.03□□□□□ -1.44
CHD7-211ENST00000532149 LPAP08519 4548 aa6.01□□□□□ -1.45
CHD7-211ENST00000532149 A6NN06 94 aa6.01□□□□□ -1.45
CHD7-211ENST00000532149 M0QZ58 72 aa6□□□□□ -1.45
CHD7-211ENST00000532149 KRTAP10-6P60371 365 aaPredicted RBP6□□□□□ -1.45
CHD7-211ENST00000532149 A8MU10 97 aa5.99□□□□□ -1.45
CHD7-211ENST00000532149 KTN1-AS1Q86SY8 53 aa5.96□□□□□ -1.46
CHD7-211ENST00000532149 ADM2Q7Z4H4 148 aa5.95□□□□□ -1.46
CHD7-211ENST00000532149 KRTAP4-1Q9BYQ7 146 aa5.92□□□□□ -1.46
CHD7-211ENST00000532149 PCLOQ9Y6V0 5065 aa5.89□□□□□ -1.47
CHD7-211ENST00000532149 KRTAP19-2Q3LHN2 52 aa5.88□□□□□ -1.47
CHD7-211ENST00000532149 HMCN2Q8NDA2 5059 aa5.87□□□□□ -1.47
CHD7-211ENST00000532149 P0C880 135 aa5.87□□□□□ -1.47
CHD7-211ENST00000532149 HERC1Q15751 4861 aa5.87□□□□□ -1.47
CHD7-211ENST00000532149 CRIPTQ9P021 101 aa5.84□□□□□ -1.47
CHD7-211ENST00000532149 R4GN34 69 aa5.81□□□□□ -1.48
CHD7-211ENST00000532149 FLGP20930 4061 aaPredicted RBP5.81□□□□□ -1.48
CHD7-211ENST00000532149 KRTAP13-4Q3LI77 160 aa5.77□□□□□ -1.49
CHD7-211ENST00000532149 A0A0D9SG42 100 aa5.72□□□□□ -1.49
CHD7-211ENST00000532149 ROMO1P60602 79 aa5.7□□□□□ -1.5
CHD7-211ENST00000532149 KRTAP12-1P59990 96 aa5.67□□□□□ -1.5
CHD7-211ENST00000532149 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.64□□□□□ -1.51
CHD7-211ENST00000532149 SPINT4Q6UDR6 99 aa5.64□□□□□ -1.51
CHD7-211ENST00000532149 KRTAP12-2P59991 146 aa5.61□□□□□ -1.51
CHD7-211ENST00000532149 LCE1AQ5T7P2 110 aa5.61□□□□□ -1.51
CHD7-211ENST00000532149 M0R2T5 61 aa5.6□□□□□ -1.51
CHD7-211ENST00000532149 MUC2Q02817 5179 aa5.58□□□□□ -1.52
CHD7-211ENST00000532149 MT1HP80294 61 aa5.57□□□□□ -1.52
CHD7-211ENST00000532149 LINC01554Q52M75 96 aa5.57□□□□□ -1.52
CHD7-211ENST00000532149 RNF213Q63HN8 5207 aa5.53□□□□□ -1.52
CHD7-211ENST00000532149 KRTAP25-1Q3LHN0 102 aa5.53□□□□□ -1.52
CHD7-211ENST00000532149 PRAC1Q96KF2 57 aa5.51□□□□□ -1.53
CHD7-211ENST00000532149 SPRR2GQ9BYE4 73 aa5.51□□□□□ -1.53
CHD7-211ENST00000532149 CAMK2N1Q7Z7J9 78 aa5.46□□□□□ -1.54
CHD7-211ENST00000532149 UBR4Q5T4S7 5183 aa5.45□□□□□ -1.54
CHD7-211ENST00000532149 PLAC4Q8WY50 150 aa5.43□□□□□ -1.54
CHD7-211ENST00000532149 KRTAP10-10P60014 251 aa5.41□□□□□ -1.54
CHD7-211ENST00000532149 FAT4Q6V0I7 4981 aa5.41□□□□□ -1.54
CHD7-211ENST00000532149 MT2AP02795 61 aa5.38□□□□□ -1.55
CHD7-211ENST00000532149 PP632Q6XCG6 107 aa5.36□□□□□ -1.55
CHD7-211ENST00000532149 MT1FP04733 61 aa5.32□□□□□ -1.56
CHD7-211ENST00000532149 KRTAP19-8Q3LI54 63 aa5.32□□□□□ -1.56
CHD7-211ENST00000532149 C10orf95Q9H7T3 257 aa5.31□□□□□ -1.56
CHD7-211ENST00000532149 TNP1P09430 55 aa5.29□□□□□ -1.56
CHD7-211ENST00000532149 KRTAP5-11Q6L8G4 156 aa5.28□□□□□ -1.56
CHD7-211ENST00000532149 KRTAP10-7P60409 375 aaPredicted RBP5.26□□□□□ -1.57
CHD7-211ENST00000532149 KRTAP2-2Q9BYT5 123 aa5.26□□□□□ -1.57
CHD7-211ENST00000532149 PRO2289Q9P1D8 64 aa5.16□□□□□ -1.58
CHD7-211ENST00000532149 MT1BP07438 61 aa5.11□□□□□ -1.59
CHD7-211ENST00000532149 KRTAP10-5P60370 271 aa5□□□□□ -1.61
CHD7-211ENST00000532149 MT1XP80297 61 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms