RNA–Protein interactions for RNA: ENST00000530535.5

USP35-206, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 2,125 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-206ENST00000530535 C9orf92A6NGG3 77 aa8.36□□□□□ -1.07
USP35-206ENST00000530535 BIRC6Q9NR09 4857 aa8.36□□□□□ -1.07
USP35-206ENST00000530535 KRTAP3-1Q9BYR8 98 aa8.35□□□□□ -1.07
USP35-206ENST00000530535 MT1HL1P0DM35 61 aa8.32□□□□□ -1.08
USP35-206ENST00000530535 ABCA13Q86UQ4 5058 aa8.28□□□□□ -1.08
USP35-206ENST00000530535 H0YAA0 97 aa8.26□□□□□ -1.09
USP35-206ENST00000530535 HERC2O95714 4834 aa8.25□□□□□ -1.09
USP35-206ENST00000530535 DMBT1Q9UGM3 2413 aaPredicted RBP8.25□□□□□ -1.09
USP35-206ENST00000530535 H3BS24 57 aa8.22□□□□□ -1.09
USP35-206ENST00000530535 A0A1B0GU33 70 aa8.16□□□□□ -1.1
USP35-206ENST00000530535 H1FX-AS1Q4G0G2 97 aa8.15□□□□□ -1.11
USP35-206ENST00000530535 COX6B2Q6YFQ2 88 aa8.15□□□□□ -1.11
USP35-206ENST00000530535 CSAG1Q6PB30 78 aa8.14□□□□□ -1.11
USP35-206ENST00000530535 LINC01554Q52M75 96 aa8.13□□□□□ -1.11
USP35-206ENST00000530535 J3QL48 77 aa8.12□□□□□ -1.11
USP35-206ENST00000530535 LPAP08519 4548 aa8.02□□□□□ -1.13
USP35-206ENST00000530535 KRTAP3-3Q9BYR6 98 aa8□□□□□ -1.13
USP35-206ENST00000530535 RPL37P61927 97 aaKnown RBP7.97□□□□□ -1.13
USP35-206ENST00000530535 KRTAP10-6P60371 365 aaPredicted RBP7.95□□□□□ -1.14
USP35-206ENST00000530535 PCLOQ9Y6V0 5065 aa7.95□□□□□ -1.14
USP35-206ENST00000530535 TPRXLQ17RH7 258 aa7.94□□□□□ -1.14
USP35-206ENST00000530535 XP32Q5T750 250 aa7.94□□□□□ -1.14
USP35-206ENST00000530535 LRP2P98164 4655 aa7.92□□□□□ -1.14
USP35-206ENST00000530535 KRTAP25-1Q3LHN0 102 aa7.92□□□□□ -1.14
USP35-206ENST00000530535 KRTAP3-2Q9BYR7 98 aa7.9□□□□□ -1.15
USP35-206ENST00000530535 KRTAP13-4Q3LI77 160 aa7.88□□□□□ -1.15
USP35-206ENST00000530535 K7ERS5 55 aa7.85□□□□□ -1.15
USP35-206ENST00000530535 HERC1Q15751 4861 aa7.84□□□□□ -1.15
USP35-206ENST00000530535 S4R3F8 94 aa7.84□□□□□ -1.16
USP35-206ENST00000530535 P0C880 135 aa7.76□□□□□ -1.17
USP35-206ENST00000530535 ROMO1P60602 79 aa7.76□□□□□ -1.17
USP35-206ENST00000530535 CRIPTQ9P021 101 aa7.76□□□□□ -1.17
USP35-206ENST00000530535 A0A0D9SG42 100 aa7.74□□□□□ -1.17
USP35-206ENST00000530535 SEC61BP60468 96 aaKnown RBP7.67□□□□□ -1.18
USP35-206ENST00000530535 HMCN2Q8NDA2 5059 aa7.67□□□□□ -1.18
USP35-206ENST00000530535 KRTAP12-2P59991 146 aa7.61□□□□□ -1.19
USP35-206ENST00000530535 MUC17Q685J3 4493 aa7.58□□□□□ -1.2
USP35-206ENST00000530535 KRTAP12-1P59990 96 aa7.56□□□□□ -1.2
USP35-206ENST00000530535 MUC2Q02817 5179 aa7.52□□□□□ -1.21
USP35-206ENST00000530535 KRTAP4-1Q9BYQ7 146 aa7.52□□□□□ -1.21
USP35-206ENST00000530535 C10orf95Q9H7T3 257 aa7.51□□□□□ -1.21
USP35-206ENST00000530535 M0QZ58 72 aa7.48□□□□□ -1.21
USP35-206ENST00000530535 SPINT4Q6UDR6 99 aa7.46□□□□□ -1.21
USP35-206ENST00000530535 A0A0A0MQY5 61 aa7.39□□□□□ -1.23
USP35-206ENST00000530535 UBR4Q5T4S7 5183 aa7.39□□□□□ -1.23
USP35-206ENST00000530535 KRTAP19-2Q3LHN2 52 aa7.3□□□□□ -1.24
USP35-206ENST00000530535 RNF213Q63HN8 5207 aa7.29□□□□□ -1.24
USP35-206ENST00000530535 KRTAP15-1Q3LI76 137 aa7.27□□□□□ -1.25
USP35-206ENST00000530535 R4GN34 69 aa7.24□□□□□ -1.25
USP35-206ENST00000530535 LORP23490 312 aaPredicted RBP7.24□□□□□ -1.25
USP35-206ENST00000530535 FAT4Q6V0I7 4981 aa7.23□□□□□ -1.25
USP35-206ENST00000530535 FLGP20930 4061 aaPredicted RBP7.19□□□□□ -1.26
USP35-206ENST00000530535 LCE2CQ5TA81 110 aa7.15□□□□□ -1.27
USP35-206ENST00000530535 NDUFAF8A1L188 74 aa7.05□□□□□ -1.28
USP35-206ENST00000530535 MT1HP80294 61 aa7.01□□□□□ -1.29
USP35-206ENST00000530535 M0R2T5 61 aa6.95□□□□□ -1.3
USP35-206ENST00000530535 PLAC4Q8WY50 150 aa6.88□□□□□ -1.31
USP35-206ENST00000530535 CAMK2N1Q7Z7J9 78 aa6.87□□□□□ -1.31
USP35-206ENST00000530535 PP632Q6XCG6 107 aa6.83□□□□□ -1.32
USP35-206ENST00000530535 LCE2AQ5TA79 106 aaPredicted RBP6.75□□□□□ -1.33
USP35-206ENST00000530535 KRTAP9-8Q9BYQ0 159 aa6.75□□□□□ -1.33
USP35-206ENST00000530535 MT2AP02795 61 aa6.72□□□□□ -1.33
USP35-206ENST00000530535 LUZP6Q538Z0 58 aa6.7□□□□□ -1.34
USP35-206ENST00000530535 MT1FP04733 61 aa6.68□□□□□ -1.34
USP35-206ENST00000530535 KRTAP10-10P60014 251 aa6.68□□□□□ -1.34
USP35-206ENST00000530535 TNP1P09430 55 aa6.65□□□□□ -1.35
USP35-206ENST00000530535 KRTAP23-1A1A580 65 aa6.63□□□□□ -1.35
USP35-206ENST00000530535 SPRR2GQ9BYE4 73 aa6.6□□□□□ -1.35
USP35-206ENST00000530535 KRTAP19-1Q8IUB9 90 aa6.58□□□□□ -1.36
USP35-206ENST00000530535 LCE2DQ5TA82 110 aaPredicted RBP6.52□□□□□ -1.37
USP35-206ENST00000530535 KRTAP9-3Q9BYQ3 159 aa6.51□□□□□ -1.37
USP35-206ENST00000530535 SPRR5A0A1B0GTR4 108 aa6.49□□□□□ -1.37
USP35-206ENST00000530535 KRTAP19-8Q3LI54 63 aa6.4□□□□□ -1.39
USP35-206ENST00000530535 LCE3AQ5TA76 89 aa6.34□□□□□ -1.39
USP35-206ENST00000530535 LCE2BO14633 110 aa6.33□□□□□ -1.4
USP35-206ENST00000530535 MT1BP07438 61 aa6.32□□□□□ -1.4
USP35-206ENST00000530535 USH2AO75445 5202 aa6.29□□□□□ -1.4
USP35-206ENST00000530535 KRTAP10-5P60370 271 aa6.2□□□□□ -1.42
USP35-206ENST00000530535 KRTAP8-1Q8IUC2 63 aa6.2□□□□□ -1.42
USP35-206ENST00000530535 MT1XP80297 61 aa6.2□□□□□ -1.42
USP35-206ENST00000530535 KRTAP9-2Q9BYQ4 174 aa6.14□□□□□ -1.43
USP35-206ENST00000530535 KRTAP10-12P60413 245 aa6.05□□□□□ -1.44
USP35-206ENST00000530535 PRO2289Q9P1D8 64 aa6.05□□□□□ -1.44
USP35-206ENST00000530535 FSIP2Q5CZC0 6907 aa6.03□□□□□ -1.44
USP35-206ENST00000530535 SSPOA2VEC9 5147 aa6.03□□□□□ -1.44
USP35-206ENST00000530535 KRTAP12-3P60328 96 aa6.02□□□□□ -1.45
USP35-206ENST00000530535 KRTAP10-7P60409 375 aaPredicted RBP6.02□□□□□ -1.45
USP35-206ENST00000530535 KRTAP19-6Q3LI70 58 aa5.95□□□□□ -1.46
USP35-206ENST00000530535 KRTAP9-6A0A140TA67 174 aa5.89□□□□□ -1.47
USP35-206ENST00000530535 KMT2DO14686 5537 aa5.88□□□□□ -1.47
USP35-206ENST00000530535 CRCT1Q9UGL9 99 aa5.78□□□□□ -1.48
USP35-206ENST00000530535 KRTAP19-5Q3LI72 72 aa5.76□□□□□ -1.49
USP35-206ENST00000530535 FCGBPQ9Y6R7 5405 aaPredicted RBP5.73□□□□□ -1.49
USP35-206ENST00000530535 KRTAP4-8A0A0G2JLE6 195 aa5.69□□□□□ -1.5
USP35-206ENST00000530535 KRTAP4-8Q9BYQ9 185 aa5.69□□□□□ -1.5
USP35-206ENST00000530535 LCE3CQ5T5A8 94 aa5.68□□□□□ -1.5
USP35-206ENST00000530535 INE1O15225 51 aa5.68□□□□□ -1.5
USP35-206ENST00000530535 KRTAP9-6A8MVA2 160 aa5.54□□□□□ -1.52
USP35-206ENST00000530535 KRTAP19-7Q3SYF9 63 aa5.53□□□□□ -1.52
USP35-206ENST00000530535 MACF1Q9UPN3 7388 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms