RNA–Protein interactions for RNA: ENST00000530535.5

USP35-206, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 2,125 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-206ENST00000530535 NISCHQ9Y2I1 1504 aa33.62■■■□□ 2.97
USP35-206ENST00000530535 CCDC180Q9P1Z9 1646 aa29.33■■■□□ 2.29
USP35-206ENST00000530535 ZCCHC6Q5VYS8 1495 aaKnown RBP28.2■■■□□ 2.1
USP35-206ENST00000530535 ABCC9O60706 1549 aa27.9■■■□□ 2.06
USP35-206ENST00000530535 DCAF8L2P0C7V8 631 aa27.88■■■□□ 2.05
USP35-206ENST00000530535 DCAF1Q9Y4B6 1507 aa27.78■■■□□ 2.04
USP35-206ENST00000530535 MYO15BQ96JP2 1530 aa27.5■■□□□ 1.99
USP35-206ENST00000530535 SHROOM4Q9ULL8 1493 aa27.43■■□□□ 1.98
USP35-206ENST00000530535 NACADO15069 1562 aa27.37■■□□□ 1.97
USP35-206ENST00000530535 RB1CC1Q8TDY2 1594 aa27.17■■□□□ 1.94
USP35-206ENST00000530535 SCRIBQ14160 1630 aa26.98■■□□□ 1.91
USP35-206ENST00000530535 SUPT5HO00267 1087 aaKnown RBP26.74■■□□□ 1.87
USP35-206ENST00000530535 UNC13AQ9UPW8 1703 aa26.58■■□□□ 1.85
USP35-206ENST00000530535 BICRAQ9NZM4 1560 aa26.35■■□□□ 1.81
USP35-206ENST00000530535 PABPN1Q86U42 306 aaKnown RBP eCLIP26.32■■□□□ 1.8
USP35-206ENST00000530535 CHIC1Q5VXU3 224 aa26.18■■□□□ 1.78
USP35-206ENST00000530535 CECR2Q9BXF3 1484 aa26.14■■□□□ 1.78
USP35-206ENST00000530535 RSF1Q96T23 1441 aaPredicted RBP26.05■■□□□ 1.76
USP35-206ENST00000530535 MROH2BQ7Z745 1585 aa25.97■■□□□ 1.75
USP35-206ENST00000530535 BAZ1AQ9NRL2 1556 aaPredicted RBP25.96■■□□□ 1.75
USP35-206ENST00000530535 SMARCA4P51532 1647 aa25.85■■□□□ 1.73
USP35-206ENST00000530535 WIZO95785 1651 aa25.74■■□□□ 1.71
USP35-206ENST00000530535 HRCP23327 699 aa25.62■■□□□ 1.69
USP35-206ENST00000530535 EIF4G1Q04637 1599 aaKnown RBP25.57■■□□□ 1.68
USP35-206ENST00000530535 PEG3Q9GZU2 1588 aa25.54■■□□□ 1.68
USP35-206ENST00000530535 ATAD2BQ9ULI0 1458 aa25.48■■□□□ 1.67
USP35-206ENST00000530535 TOP2AP11388 1531 aaKnown RBP25.46■■□□□ 1.67
USP35-206ENST00000530535 SMARCA2P51531 1590 aa25.45■■□□□ 1.66
USP35-206ENST00000530535 PCGF6Q9BYE7 350 aa25.42■■□□□ 1.66
USP35-206ENST00000530535 LOC105371045A0A1W2PR82 267 aa25.35■■□□□ 1.65
USP35-206ENST00000530535 BAZ1BQ9UIG0 1483 aaKnown RBP25.33■■□□□ 1.64
USP35-206ENST00000530535 NCAPD3P42695 1498 aa25.29■■□□□ 1.64
USP35-206ENST00000530535 CCDC88BA6NC98 1476 aa25.23■■□□□ 1.63
USP35-206ENST00000530535 CC2D2AQ9P2K1 1620 aa25.23■■□□□ 1.63
USP35-206ENST00000530535 HMGXB3Q12766 1538 aa25.21■■□□□ 1.63
USP35-206ENST00000530535 PPARGC1BQ86YN6 1023 aaKnown RBP25.01■■□□□ 1.59
USP35-206ENST00000530535 TRIM26Q12899 539 aaPredicted RBP24.97■■□□□ 1.59
USP35-206ENST00000530535 TRIM41Q8WV44 630 aa24.92■■□□□ 1.58
USP35-206ENST00000530535 DNAJC5BQ9UF47 199 aa24.76■■□□□ 1.55
USP35-206ENST00000530535 CFTRP13569 1480 aa24.69■■□□□ 1.54
USP35-206ENST00000530535 FAM9AQ8IZU1 332 aaPredicted RBP24.67■■□□□ 1.54
USP35-206ENST00000530535 ABCC8Q09428 1581 aa24.65■■□□□ 1.54
USP35-206ENST00000530535 CADPSQ9ULU8 1353 aa24.65■■□□□ 1.54
USP35-206ENST00000530535 WRNQ14191 1432 aaPredicted RBP eCLIP24.52■■□□□ 1.52
USP35-206ENST00000530535 PRDM2Q13029 1718 aa24.49■■□□□ 1.51
USP35-206ENST00000530535 ZEB1P37275 1124 aaPredicted RBP24.47■■□□□ 1.51
USP35-206ENST00000530535 NESP48681 1621 aa24.45■■□□□ 1.5
USP35-206ENST00000530535 LAMC3Q9Y6N6 1575 aa24.43■■□□□ 1.5
USP35-206ENST00000530535 EHMT2Q96KQ7 1210 aa24.4■■□□□ 1.5
USP35-206ENST00000530535 SYNJ1O43426 1573 aa24.39■■□□□ 1.5
USP35-206ENST00000530535 FANCD2Q9BXW9 1451 aa24.36■■□□□ 1.49
USP35-206ENST00000530535 TOP2BQ02880 1626 aa24.31■■□□□ 1.48
USP35-206ENST00000530535 CUX1P39880 1505 aa24.28■■□□□ 1.48
USP35-206ENST00000530535 PDS5BQ9NTI5 1447 aa24.28■■□□□ 1.48
USP35-206ENST00000530535 BIVM-ERCC5R4GMW8 1640 aa24.27■■□□□ 1.48
USP35-206ENST00000530535 CEP164Q9UPV0 1460 aa24.21■■□□□ 1.47
USP35-206ENST00000530535 SOGA1O94964 1423 aa24.18■■□□□ 1.46
USP35-206ENST00000530535 RUSC2Q8N2Y8 1516 aa24.12■■□□□ 1.45
USP35-206ENST00000530535 KIF21AQ7Z4S6 1674 aa24.12■■□□□ 1.45
USP35-206ENST00000530535 EEA1Q15075 1411 aa24.1■■□□□ 1.45
USP35-206ENST00000530535 DNMBPQ6XZF7 1577 aa24.1■■□□□ 1.45
USP35-206ENST00000530535 TOPBP1Q92547 1522 aa24.07■■□□□ 1.44
USP35-206ENST00000530535 URB2Q14146 1524 aaKnown RBP24.05■■□□□ 1.44
USP35-206ENST00000530535 FGD5Q6ZNL6 1462 aa24.04■■□□□ 1.44
USP35-206ENST00000530535 CSRNP3Q8WYN3 585 aa24.02■■□□□ 1.44
USP35-206ENST00000530535 CEP162Q5TB80 1403 aa24■■□□□ 1.43
USP35-206ENST00000530535 TNIKQ9UKE5 1360 aa23.97■■□□□ 1.43
USP35-206ENST00000530535 POLA1P09884 1462 aaPredicted RBP23.95■■□□□ 1.42
USP35-206ENST00000530535 MRC2Q9UBG0 1479 aa23.95■■□□□ 1.42
USP35-206ENST00000530535 ERCC6Q03468 1493 aa23.94■■□□□ 1.42
USP35-206ENST00000530535 KIF27Q86VH2 1401 aa23.92■■□□□ 1.42
USP35-206ENST00000530535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.9■■□□□ 1.42
USP35-206ENST00000530535 RAD54L2Q9Y4B4 1467 aa23.88■■□□□ 1.41
USP35-206ENST00000530535 CUX2O14529 1486 aa23.87■■□□□ 1.41
USP35-206ENST00000530535 ABCA10Q8WWZ4 1543 aa23.83■■□□□ 1.41
USP35-206ENST00000530535 CCER1Q8TC90 406 aaPredicted RBP23.81■■□□□ 1.4
USP35-206ENST00000530535 WDR62O43379 1518 aa23.81■■□□□ 1.4
USP35-206ENST00000530535 GOLGA3Q08378 1498 aa23.81■■□□□ 1.4
USP35-206ENST00000530535 KIF21BO75037 1637 aa23.76■■□□□ 1.39
USP35-206ENST00000530535 THOC2Q8NI27 1593 aaKnown RBP23.75■■□□□ 1.39
USP35-206ENST00000530535 IGF1RP08069 1367 aa23.73■■□□□ 1.39
USP35-206ENST00000530535 WDR97A6NE52 1622 aa23.71■■□□□ 1.39
USP35-206ENST00000530535 PRXQ9BXM0 1461 aa23.71■■□□□ 1.39
USP35-206ENST00000530535 UBTFP17480 764 aaKnown RBP23.71■■□□□ 1.39
USP35-206ENST00000530535 TARBP1Q13395 1621 aaKnown RBP23.71■■□□□ 1.39
USP35-206ENST00000530535 RAPGEF2Q9Y4G8 1499 aa23.69■■□□□ 1.38
USP35-206ENST00000530535 TDRD9Q8NDG6 1382 aaKnown RBP23.68■■□□□ 1.38
USP35-206ENST00000530535 TTBK1Q5TCY1 1321 aaPredicted RBP23.68■■□□□ 1.38
USP35-206ENST00000530535 SCAF1Q9H7N4 1312 aaKnown RBP23.68■■□□□ 1.38
USP35-206ENST00000530535 IFT140Q96RY7 1462 aa23.64■■□□□ 1.37
USP35-206ENST00000530535 ERICH3Q5RHP9 1530 aa23.64■■□□□ 1.37
USP35-206ENST00000530535 GAPVD1Q14C86 1478 aa23.62■■□□□ 1.37
USP35-206ENST00000530535 ABCA5Q8WWZ7 1642 aa23.62■■□□□ 1.37
USP35-206ENST00000530535 CARMIL1Q5VZK9 1371 aa23.61■■□□□ 1.37
USP35-206ENST00000530535 AQRO60306 1485 aaKnown RBP eCLIP23.55■■□□□ 1.366e-7■■■■■ 32.3
USP35-206ENST00000530535 ZNF608Q9ULD9 1512 aaPredicted RBP23.52■■□□□ 1.36
USP35-206ENST00000530535 CLIP1P30622 1438 aa23.51■■□□□ 1.35
USP35-206ENST00000530535 CUL7Q14999 1698 aa23.5■■□□□ 1.35
USP35-206ENST00000530535 VPS8Q8N3P4 1428 aa23.47■■□□□ 1.35
USP35-206ENST00000530535 DIEXFQ68CQ4 756 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms