RNA–Protein interactions for RNA: ENST00000530275.3

MACF1-230, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-230ENST00000530275 KRTAP10-7P60409 375 aaPredicted RBP5.02□□□□□ -1.61
MACF1-230ENST00000530275 SPRR2GQ9BYE4 73 aa5.02□□□□□ -1.61
MACF1-230ENST00000530275 ZFHX3Q15911 3703 aa5.01□□□□□ -1.61
MACF1-230ENST00000530275 TRRAPQ9Y4A5 3859 aa5.01□□□□□ -1.61
MACF1-230ENST00000530275 DNAH9Q9NYC9 4486 aa5□□□□□ -1.61
MACF1-230ENST00000530275 KRTAP19-5Q3LI72 72 aa4.99□□□□□ -1.61
MACF1-230ENST00000530275 DNAH1Q9P2D7 4330 aa4.99□□□□□ -1.61
MACF1-230ENST00000530275 SPRR2FQ96RM1 72 aa4.98□□□□□ -1.61
MACF1-230ENST00000530275 DNAH10Q8IVF4 4471 aa4.98□□□□□ -1.61
MACF1-230ENST00000530275 LCE3CQ5T5A8 94 aa4.95□□□□□ -1.62
MACF1-230ENST00000530275 DNAH5Q8TE73 4624 aa4.94□□□□□ -1.62
MACF1-230ENST00000530275 SRRM2Q9UQ35 2752 aaKnown RBP4.92□□□□□ -1.62
MACF1-230ENST00000530275 CUBNO60494 3623 aa4.92□□□□□ -1.62
MACF1-230ENST00000530275 MT1FP04733 61 aa4.92□□□□□ -1.62
MACF1-230ENST00000530275 DNAH11Q96DT5 4516 aa4.92□□□□□ -1.62
MACF1-230ENST00000530275 AKAP9Q99996 3911 aa4.9□□□□□ -1.62
MACF1-230ENST00000530275 COL7A1Q02388 2944 aa4.88□□□□□ -1.63
MACF1-230ENST00000530275 SVEP1Q4LDE5 3571 aa4.85□□□□□ -1.63
MACF1-230ENST00000530275 CSMD2Q7Z408 3487 aa4.83□□□□□ -1.64
MACF1-230ENST00000530275 DNAH17Q9UFH2 4485 aa4.83□□□□□ -1.64
MACF1-230ENST00000530275 KRTAP19-4Q3LI73 84 aa4.81□□□□□ -1.64
MACF1-230ENST00000530275 DNAH3Q8TD57 4116 aa4.8□□□□□ -1.64
MACF1-230ENST00000530275 VPS13CQ709C8 3753 aa4.76□□□□□ -1.65
MACF1-230ENST00000530275 VPS13DQ5THJ4 4388 aa4.74□□□□□ -1.65
MACF1-230ENST00000530275 PLECQ15149 4684 aaKnown RBP4.74□□□□□ -1.65
MACF1-230ENST00000530275 SPRR2EP22531 72 aa4.73□□□□□ -1.65
MACF1-230ENST00000530275 SPRR2BP35325 72 aa4.73□□□□□ -1.65
MACF1-230ENST00000530275 SPRR2AP35326 72 aa4.73□□□□□ -1.65
MACF1-230ENST00000530275 DNAH8Q96JB1 4490 aa4.73□□□□□ -1.65
MACF1-230ENST00000530275 SACSQ9NZJ4 4579 aa4.72□□□□□ -1.65
MACF1-230ENST00000530275 FAT2Q9NYQ8 4349 aa4.71□□□□□ -1.65
MACF1-230ENST00000530275 DYNC1H1Q14204 4646 aaKnown RBP4.69□□□□□ -1.66
MACF1-230ENST00000530275 DYNC2H1Q8NCM8 4307 aaKnown RBP4.67□□□□□ -1.66
MACF1-230ENST00000530275 LCE3BQ5TA77 95 aa4.65□□□□□ -1.66
MACF1-230ENST00000530275 CSMD3Q7Z407 3707 aa4.64□□□□□ -1.67
MACF1-230ENST00000530275 ZNF469Q96JG9 3925 aaPredicted RBP4.63□□□□□ -1.67
MACF1-230ENST00000530275 CMYA5Q8N3K9 4069 aa4.63□□□□□ -1.67
MACF1-230ENST00000530275 LRP1BQ9NZR2 4599 aa4.62□□□□□ -1.67
MACF1-230ENST00000530275 KRTAP19-8Q3LI54 63 aa4.6□□□□□ -1.67
MACF1-230ENST00000530275 SPRR2DP22532 72 aa4.59□□□□□ -1.67
MACF1-230ENST00000530275 MT1GP13640 62 aa4.56□□□□□ -1.68
MACF1-230ENST00000530275 FAT1Q14517 4588 aa4.55□□□□□ -1.68
MACF1-230ENST00000530275 DNAH6Q9C0G6 4158 aa4.55□□□□□ -1.68
MACF1-230ENST00000530275 DNAH7Q8WXX0 4024 aa4.54□□□□□ -1.68
MACF1-230ENST00000530275 LCE2BO14633 110 aa4.53□□□□□ -1.68
MACF1-230ENST00000530275 MT1XP80297 61 aa4.52□□□□□ -1.69
MACF1-230ENST00000530275 KRTAP19-1Q8IUB9 90 aa4.51□□□□□ -1.69
MACF1-230ENST00000530275 ANK2Q01484 3957 aa4.51□□□□□ -1.69
MACF1-230ENST00000530275 PRKDCP78527 4128 aaKnown RBP4.5□□□□□ -1.69
MACF1-230ENST00000530275 KRTAP12-4P60329 112 aa4.5□□□□□ -1.69
MACF1-230ENST00000530275 STARD9Q9P2P6 4700 aa4.49□□□□□ -1.69
MACF1-230ENST00000530275 HERC1Q15751 4861 aa4.47□□□□□ -1.69
MACF1-230ENST00000530275 APOBP04114 4563 aaKnown RBP4.47□□□□□ -1.69
MACF1-230ENST00000530275 MT1BP07438 61 aa4.42□□□□□ -1.7
MACF1-230ENST00000530275 FAT3Q8TDW7 4589 aa4.4□□□□□ -1.7
MACF1-230ENST00000530275 LRP1Q07954 4544 aaKnown RBP4.4□□□□□ -1.7
MACF1-230ENST00000530275 LCE3DQ9BYE3 92 aa4.38□□□□□ -1.71
MACF1-230ENST00000530275 RYR1P21817 5038 aa4.37□□□□□ -1.71
MACF1-230ENST00000530275 VPS13BQ7Z7G8 4022 aa4.37□□□□□ -1.71
MACF1-230ENST00000530275 KRTAP4-8A0A0G2JLE6 195 aa4.34□□□□□ -1.71
MACF1-230ENST00000530275 KRTAP4-8Q9BYQ9 185 aa4.34□□□□□ -1.71
MACF1-230ENST00000530275 KRTAP9-8Q9BYQ0 159 aa4.34□□□□□ -1.71
MACF1-230ENST00000530275 HSPG2P98160 4391 aa4.34□□□□□ -1.72
MACF1-230ENST00000530275 RYR3Q15413 4870 aa4.31□□□□□ -1.72
MACF1-230ENST00000530275 LCE3EQ5T5B0 92 aa4.31□□□□□ -1.72
MACF1-230ENST00000530275 SPRR5A0A1B0GTR4 108 aa4.29□□□□□ -1.72
MACF1-230ENST00000530275 KRTAP9-3Q9BYQ3 159 aa4.28□□□□□ -1.72
MACF1-230ENST00000530275 KRTAP17-1Q9BYP8 105 aa4.27□□□□□ -1.73
MACF1-230ENST00000530275 KMT2AQ03164 3969 aa4.27□□□□□ -1.73
MACF1-230ENST00000530275 FRAS1Q86XX4 4008 aa4.26□□□□□ -1.73
MACF1-230ENST00000530275 DNHD1Q96M86 4753 aa4.25□□□□□ -1.73
MACF1-230ENST00000530275 LCE2CQ5TA81 110 aa4.23□□□□□ -1.73
MACF1-230ENST00000530275 KRTAP19-3Q7Z4W3 81 aa4.22□□□□□ -1.73
MACF1-230ENST00000530275 PKHD1L1Q86WI1 4243 aa4.19□□□□□ -1.74
MACF1-230ENST00000530275 LCE2DQ5TA82 110 aaPredicted RBP4.17□□□□□ -1.74
MACF1-230ENST00000530275 MT1LQ93083 61 aa4.15□□□□□ -1.74
MACF1-230ENST00000530275 RYR2Q92736 4967 aa4.13□□□□□ -1.75
MACF1-230ENST00000530275 MYCBP2O75592 4640 aa4.12□□□□□ -1.75
MACF1-230ENST00000530275 KRTAP4-7Q9BYR0 210 aa4.12□□□□□ -1.75
MACF1-230ENST00000530275 MT1EP04732 61 aa4.1□□□□□ -1.75
MACF1-230ENST00000530275 HECTD4Q9Y4D8 3996 aa4.1□□□□□ -1.75
MACF1-230ENST00000530275 PKD1P98161 4303 aa4.1□□□□□ -1.75
MACF1-230ENST00000530275 MT3P25713 68 aa4.05□□□□□ -1.76
MACF1-230ENST00000530275 LYSTQ99698 3801 aa4.04□□□□□ -1.76
MACF1-230ENST00000530275 MT4P47944 62 aa4.04□□□□□ -1.76
MACF1-230ENST00000530275 PRM1P04553 51 aa4.01□□□□□ -1.77
MACF1-230ENST00000530275 MT1MQ8N339 61 aa4□□□□□ -1.77
MACF1-230ENST00000530275 MUC17Q685J3 4493 aa4□□□□□ -1.77
MACF1-230ENST00000530275 LOC100996750A0A140TA64 210 aa3.93□□□□□ -1.78
MACF1-230ENST00000530275 LCE1BQ5T7P3 118 aa3.92□□□□□ -1.78
MACF1-230ENST00000530275 KRTAP19-6Q3LI70 58 aa3.89□□□□□ -1.79
MACF1-230ENST00000530275 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
MACF1-230ENST00000530275 KRTAP19-2Q3LHN2 52 aa3.87□□□□□ -1.79
MACF1-230ENST00000530275 LPAP08519 4548 aa3.87□□□□□ -1.79
MACF1-230ENST00000530275 TNXBP22105 4242 aa3.86□□□□□ -1.79
MACF1-230ENST00000530275 KRTAP4-3Q9BYR4 195 aa3.85□□□□□ -1.79
MACF1-230ENST00000530275 HERC2O95714 4834 aa3.85□□□□□ -1.79
MACF1-230ENST00000530275 BIRC6Q9NR09 4857 aa3.84□□□□□ -1.8
MACF1-230ENST00000530275 KRTAP9-2Q9BYQ4 174 aa3.8□□□□□ -1.8
MACF1-230ENST00000530275 KIAA1109Q2LD37 5005 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms