RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 C8orf87E5RJ46 101 aa3.41□□□□□ -1.86
ATPAF1-208ENST00000526821 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
ATPAF1-208ENST00000526821 CASC2Q6XLA1 102 aa3.41□□□□□ -1.86
ATPAF1-208ENST00000526821 WFDC13Q8IUB5 93 aa3.41□□□□□ -1.86
ATPAF1-208ENST00000526821 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
ATPAF1-208ENST00000526821 DMBT1Q9UGM3 2413 aaPredicted RBP3.4□□□□□ -1.86
ATPAF1-208ENST00000526821 PCLOQ9Y6V0 5065 aa3.4□□□□□ -1.86
ATPAF1-208ENST00000526821 TMEM254Q8TBM7 123 aa3.4□□□□□ -1.87
ATPAF1-208ENST00000526821 KRTAP5-9P26371 169 aa3.38□□□□□ -1.87
ATPAF1-208ENST00000526821 LINC00313P59037 77 aa3.38□□□□□ -1.87
ATPAF1-208ENST00000526821 SEC61GP60059 68 aa3.38□□□□□ -1.87
ATPAF1-208ENST00000526821 MRPL34Q9BQ48 92 aaKnown RBP3.38□□□□□ -1.87
ATPAF1-208ENST00000526821 V9GYY9 64 aa3.38□□□□□ -1.87
ATPAF1-208ENST00000526821 RETNLBQ9BQ08 111 aa3.37□□□□□ -1.87
ATPAF1-208ENST00000526821 A0A0U1RQV1 116 aa3.35□□□□□ -1.87
ATPAF1-208ENST00000526821 TP53AIP1Q9HCN2 124 aa3.35□□□□□ -1.87
ATPAF1-208ENST00000526821 KRTAP13-3Q3SY46 172 aa3.34□□□□□ -1.87
ATPAF1-208ENST00000526821 BRK1Q8WUW1 75 aa3.34□□□□□ -1.87
ATPAF1-208ENST00000526821 SNURFQ9Y675 71 aa3.34□□□□□ -1.87
ATPAF1-208ENST00000526821 A8MU10 97 aa3.33□□□□□ -1.88
ATPAF1-208ENST00000526821 ZCCHC13Q8WW36 166 aaKnown RBP3.33□□□□□ -1.88
ATPAF1-208ENST00000526821 C20orf166-AS1Q96NR2 134 aa3.33□□□□□ -1.88
ATPAF1-208ENST00000526821 A8MUU9 505 aa3.32□□□□□ -1.88
ATPAF1-208ENST00000526821 Q1T7F1 81 aa3.32□□□□□ -1.88
ATPAF1-208ENST00000526821 Q5W150 140 aa3.32□□□□□ -1.88
ATPAF1-208ENST00000526821 HERC1Q15751 4861 aa3.31□□□□□ -1.88
ATPAF1-208ENST00000526821 TRAV22A0A0B4J277 110 aa3.31□□□□□ -1.88
ATPAF1-208ENST00000526821 C9orf92A6NGG3 77 aa3.31□□□□□ -1.88
ATPAF1-208ENST00000526821 H3BPC8 53 aa3.31□□□□□ -1.88
ATPAF1-208ENST00000526821 NDUFS5O43920 106 aa3.31□□□□□ -1.88
ATPAF1-208ENST00000526821 HMCN2Q8NDA2 5059 aa3.3□□□□□ -1.88
ATPAF1-208ENST00000526821 H0Y9P7 68 aa3.3□□□□□ -1.88
ATPAF1-208ENST00000526821 MP68P56378 58 aa3.3□□□□□ -1.88
ATPAF1-208ENST00000526821 LRP2P98164 4655 aa3.29□□□□□ -1.88
ATPAF1-208ENST00000526821 PMAIP1Q13794 54 aa3.29□□□□□ -1.88
ATPAF1-208ENST00000526821 CYP4F30PQ9H0H9 118 aa3.29□□□□□ -1.88
ATPAF1-208ENST00000526821 TPRXLQ17RH7 258 aa3.28□□□□□ -1.88
ATPAF1-208ENST00000526821 C1orf64Q8NEQ6 169 aa3.28□□□□□ -1.88
ATPAF1-208ENST00000526821 LINC00208Q96KT6 92 aa3.28□□□□□ -1.88
ATPAF1-208ENST00000526821 LPAP08519 4548 aa3.28□□□□□ -1.88
ATPAF1-208ENST00000526821 PRR4Q16378 134 aa3.27□□□□□ -1.89
ATPAF1-208ENST00000526821 LOC101927531A0A1B0GV80 90 aa3.26□□□□□ -1.89
ATPAF1-208ENST00000526821 RPL37P61927 97 aaKnown RBP3.26□□□□□ -1.89
ATPAF1-208ENST00000526821 MUC17Q685J3 4493 aa3.24□□□□□ -1.89
ATPAF1-208ENST00000526821 KRTAP12-2P59991 146 aa3.23□□□□□ -1.89
ATPAF1-208ENST00000526821 SPANXA2-OT1Q8N9U9 137 aa3.22□□□□□ -1.89
ATPAF1-208ENST00000526821 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
ATPAF1-208ENST00000526821 ATP11AUNQ6ZP68 121 aa3.21□□□□□ -1.9
ATPAF1-208ENST00000526821 KTN1-AS1Q86SY8 53 aa3.21□□□□□ -1.9
ATPAF1-208ENST00000526821 PCOTHQ58A44 107 aa3.2□□□□□ -1.9
ATPAF1-208ENST00000526821 Q5VV11 94 aa3.2□□□□□ -1.9
ATPAF1-208ENST00000526821 C7orf65Q6ZTY9 151 aa3.2□□□□□ -1.9
ATPAF1-208ENST00000526821 HRES1P13985 223 aa3.19□□□□□ -1.9
ATPAF1-208ENST00000526821 SPINK7P58062 85 aa3.19□□□□□ -1.9
ATPAF1-208ENST00000526821 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
ATPAF1-208ENST00000526821 A8MUN3 132 aa3.17□□□□□ -1.9
ATPAF1-208ENST00000526821 PSPHP1O15172 72 aa3.17□□□□□ -1.9
ATPAF1-208ENST00000526821 A6NN06 94 aa3.16□□□□□ -1.9
ATPAF1-208ENST00000526821 RBM12B-AS1Q9P1G2 102 aa3.16□□□□□ -1.9
ATPAF1-208ENST00000526821 DMAC1Q96GE9 116 aa3.15□□□□□ -1.91
ATPAF1-208ENST00000526821 CDC42SE1Q9NRR8 79 aa3.14□□□□□ -1.91
ATPAF1-208ENST00000526821 CHKB-CPT1BH3BT56 60 aa3.12□□□□□ -1.91
ATPAF1-208ENST00000526821 COX6B2Q6YFQ2 88 aa3.12□□□□□ -1.91
ATPAF1-208ENST00000526821 LCA10Q71F78 164 aa3.12□□□□□ -1.91
ATPAF1-208ENST00000526821 KRTAP4-1Q9BYQ7 146 aa3.12□□□□□ -1.91
ATPAF1-208ENST00000526821 UBR4Q5T4S7 5183 aa3.12□□□□□ -1.91
ATPAF1-208ENST00000526821 LCE3AQ5TA76 89 aa3.11□□□□□ -1.91
ATPAF1-208ENST00000526821 PRR15LQ9BU68 103 aa3.11□□□□□ -1.91
ATPAF1-208ENST00000526821 LINC01558Q9Y6Z2 57 aa3.11□□□□□ -1.91
ATPAF1-208ENST00000526821 ACYP2P14621 99 aa3.1□□□□□ -1.91
ATPAF1-208ENST00000526821 COA5Q86WW8 74 aa3.1□□□□□ -1.91
ATPAF1-208ENST00000526821 MUC2Q02817 5179 aa3.1□□□□□ -1.91
ATPAF1-208ENST00000526821 RNF213Q63HN8 5207 aa3.09□□□□□ -1.91
ATPAF1-208ENST00000526821 A6NED7 52 aa3.08□□□□□ -1.92
ATPAF1-208ENST00000526821 KRTAP19-2Q3LHN2 52 aa3.06□□□□□ -1.92
ATPAF1-208ENST00000526821 SPTSSBQ8NFR3 76 aa3.06□□□□□ -1.92
ATPAF1-208ENST00000526821 H1FX-AS1Q4G0G2 97 aa3.03□□□□□ -1.92
ATPAF1-208ENST00000526821 FLGP20930 4061 aaPredicted RBP3.02□□□□□ -1.93
ATPAF1-208ENST00000526821 FAT4Q6V0I7 4981 aa3.01□□□□□ -1.93
ATPAF1-208ENST00000526821 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
ATPAF1-208ENST00000526821 S4R3F8 94 aa2.99□□□□□ -1.93
ATPAF1-208ENST00000526821 LINC01554Q52M75 96 aa2.98□□□□□ -1.93
ATPAF1-208ENST00000526821 SPATA8Q6RVD6 105 aa2.96□□□□□ -1.94
ATPAF1-208ENST00000526821 CSAG1Q6PB30 78 aa2.93□□□□□ -1.94
ATPAF1-208ENST00000526821 A0A1B0GU69 56 aa2.91□□□□□ -1.94
ATPAF1-208ENST00000526821 H0YAA0 97 aa2.91□□□□□ -1.94
ATPAF1-208ENST00000526821 MT1HP80294 61 aa2.9□□□□□ -1.95
ATPAF1-208ENST00000526821 UQCR11O14957 56 aa2.89□□□□□ -1.95
ATPAF1-208ENST00000526821 ADM2Q7Z4H4 148 aa2.89□□□□□ -1.95
ATPAF1-208ENST00000526821 MIR22HGQ0VDD5 57 aa2.88□□□□□ -1.95
ATPAF1-208ENST00000526821 KRTAP5-2Q701N4 177 aa2.87□□□□□ -1.95
ATPAF1-208ENST00000526821 P0C880 135 aa2.86□□□□□ -1.95
ATPAF1-208ENST00000526821 A0A1B0GU33 70 aa2.85□□□□□ -1.95
ATPAF1-208ENST00000526821 M0R2T5 61 aa2.81□□□□□ -1.96
ATPAF1-208ENST00000526821 KRTAP13-4Q3LI77 160 aa2.81□□□□□ -1.96
ATPAF1-208ENST00000526821 KRTAP25-1Q3LHN0 102 aa2.8□□□□□ -1.96
ATPAF1-208ENST00000526821 M0QZ58 72 aa2.79□□□□□ -1.96
ATPAF1-208ENST00000526821 MT2AP02795 61 aa2.79□□□□□ -1.96
ATPAF1-208ENST00000526821 KRTAP5-5Q701N2 237 aaPredicted RBP2.79□□□□□ -1.96
ATPAF1-208ENST00000526821 ROMO1P60602 79 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms