RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 KRTAP3-1Q9BYR8 98 aa3.65□□□□□ -1.83
TGFBR3-207ENST00000525962 KMT2CQ8NEZ4 4911 aaKnown RBP3.64□□□□□ -1.83
TGFBR3-207ENST00000525962 SEC61BP60468 96 aaKnown RBP3.64□□□□□ -1.83
TGFBR3-207ENST00000525962 PKHD1P08F94 4074 aa3.62□□□□□ -1.83
TGFBR3-207ENST00000525962 SACSQ9NZJ4 4579 aa3.61□□□□□ -1.83
TGFBR3-207ENST00000525962 LRP1BQ9NZR2 4599 aa3.59□□□□□ -1.83
TGFBR3-207ENST00000525962 FAT1Q14517 4588 aa3.59□□□□□ -1.83
TGFBR3-207ENST00000525962 DNAH5Q8TE73 4624 aa3.59□□□□□ -1.83
TGFBR3-207ENST00000525962 RPS29P62273 56 aaKnown RBP3.58□□□□□ -1.84
TGFBR3-207ENST00000525962 RYR2Q92736 4967 aa3.57□□□□□ -1.84
TGFBR3-207ENST00000525962 M0R2T5 61 aa3.57□□□□□ -1.84
TGFBR3-207ENST00000525962 KRTAP10-8P60410 259 aa3.57□□□□□ -1.84
TGFBR3-207ENST00000525962 KRTAP13-4Q3LI77 160 aa3.57□□□□□ -1.84
TGFBR3-207ENST00000525962 MYCBP2O75592 4640 aa3.57□□□□□ -1.84
TGFBR3-207ENST00000525962 XP32Q5T750 250 aa3.55□□□□□ -1.84
TGFBR3-207ENST00000525962 TPRXLQ17RH7 258 aa3.55□□□□□ -1.84
TGFBR3-207ENST00000525962 RYR3Q15413 4870 aa3.54□□□□□ -1.84
TGFBR3-207ENST00000525962 KRTAP12-2P59991 146 aa3.53□□□□□ -1.84
TGFBR3-207ENST00000525962 VPS13BQ7Z7G8 4022 aa3.52□□□□□ -1.85
TGFBR3-207ENST00000525962 FAT3Q8TDW7 4589 aa3.52□□□□□ -1.85
TGFBR3-207ENST00000525962 KRTAP10-6P60371 365 aaPredicted RBP3.48□□□□□ -1.85
TGFBR3-207ENST00000525962 A0A1B0GVY2 172 aa3.47□□□□□ -1.85
TGFBR3-207ENST00000525962 DYNC1H1Q14204 4646 aaKnown RBP3.47□□□□□ -1.85
TGFBR3-207ENST00000525962 PLAC4Q8WY50 150 aa3.47□□□□□ -1.85
TGFBR3-207ENST00000525962 KRTAP15-1Q3LI76 137 aa3.44□□□□□ -1.86
TGFBR3-207ENST00000525962 KRTAP12-1P59990 96 aa3.43□□□□□ -1.86
TGFBR3-207ENST00000525962 KRTAP3-3Q9BYR6 98 aa3.42□□□□□ -1.86
TGFBR3-207ENST00000525962 EPPK1P58107 5090 aaKnown RBP3.42□□□□□ -1.86
TGFBR3-207ENST00000525962 APOBP04114 4563 aaKnown RBP3.41□□□□□ -1.86
TGFBR3-207ENST00000525962 LRP1Q07954 4544 aaKnown RBP3.41□□□□□ -1.86
TGFBR3-207ENST00000525962 KRTAP3-2Q9BYR7 98 aa3.4□□□□□ -1.86
TGFBR3-207ENST00000525962 LCE2DQ5TA82 110 aaPredicted RBP3.38□□□□□ -1.87
TGFBR3-207ENST00000525962 KIAA1109Q2LD37 5005 aa3.37□□□□□ -1.87
TGFBR3-207ENST00000525962 TNP1P09430 55 aa3.36□□□□□ -1.87
TGFBR3-207ENST00000525962 KRTAP10-4P60372 401 aaPredicted RBP3.33□□□□□ -1.88
TGFBR3-207ENST00000525962 HSPG2P98160 4391 aa3.32□□□□□ -1.88
TGFBR3-207ENST00000525962 RYR1P21817 5038 aa3.32□□□□□ -1.88
TGFBR3-207ENST00000525962 LORP23490 312 aaPredicted RBP3.29□□□□□ -1.88
TGFBR3-207ENST00000525962 TNXBP22105 4242 aa3.27□□□□□ -1.89
TGFBR3-207ENST00000525962 KRTAP4-5Q9BYR2 181 aa3.26□□□□□ -1.89
TGFBR3-207ENST00000525962 KRTAP17-1Q9BYP8 105 aa3.26□□□□□ -1.89
TGFBR3-207ENST00000525962 LRP2P98164 4655 aa3.26□□□□□ -1.89
TGFBR3-207ENST00000525962 MT1HL1P0DM35 61 aa3.25□□□□□ -1.89
TGFBR3-207ENST00000525962 PP632Q6XCG6 107 aa3.25□□□□□ -1.89
TGFBR3-207ENST00000525962 HERC2O95714 4834 aa3.24□□□□□ -1.89
TGFBR3-207ENST00000525962 ABCA13Q86UQ4 5058 aa3.23□□□□□ -1.89
TGFBR3-207ENST00000525962 BIRC6Q9NR09 4857 aa3.2□□□□□ -1.9
TGFBR3-207ENST00000525962 KRTAP10-10P60014 251 aa3.2□□□□□ -1.9
TGFBR3-207ENST00000525962 LPAP08519 4548 aa3.17□□□□□ -1.9
TGFBR3-207ENST00000525962 PRO2289Q9P1D8 64 aa3.13□□□□□ -1.91
TGFBR3-207ENST00000525962 HERC1Q15751 4861 aa3.13□□□□□ -1.91
TGFBR3-207ENST00000525962 PCLOQ9Y6V0 5065 aa3.13□□□□□ -1.91
TGFBR3-207ENST00000525962 KRTAP4-1Q9BYQ7 146 aa3.12□□□□□ -1.91
TGFBR3-207ENST00000525962 MUC2Q02817 5179 aa3.09□□□□□ -1.92
TGFBR3-207ENST00000525962 MUC17Q685J3 4493 aa3.07□□□□□ -1.92
TGFBR3-207ENST00000525962 INE1O15225 51 aa3.05□□□□□ -1.92
TGFBR3-207ENST00000525962 RNF213Q63HN8 5207 aa2.99□□□□□ -1.93
TGFBR3-207ENST00000525962 UBR4Q5T4S7 5183 aa2.96□□□□□ -1.93
TGFBR3-207ENST00000525962 LCE3AQ5TA76 89 aa2.96□□□□□ -1.94
TGFBR3-207ENST00000525962 HMCN2Q8NDA2 5059 aa2.94□□□□□ -1.94
TGFBR3-207ENST00000525962 FAT4Q6V0I7 4981 aa2.94□□□□□ -1.94
TGFBR3-207ENST00000525962 LCE2BO14633 110 aa2.92□□□□□ -1.94
TGFBR3-207ENST00000525962 FLGP20930 4061 aaPredicted RBP2.86□□□□□ -1.95
TGFBR3-207ENST00000525962 KRTAP12-3P60328 96 aa2.86□□□□□ -1.95
TGFBR3-207ENST00000525962 KRTAP10-12P60413 245 aa2.86□□□□□ -1.95
TGFBR3-207ENST00000525962 FSIP2Q5CZC0 6907 aa2.84□□□□□ -1.95
TGFBR3-207ENST00000525962 CRCT1Q9UGL9 99 aa2.82□□□□□ -1.96
TGFBR3-207ENST00000525962 KRTAP23-1A1A580 65 aa2.79□□□□□ -1.96
TGFBR3-207ENST00000525962 MT1FP04733 61 aa2.78□□□□□ -1.96
TGFBR3-207ENST00000525962 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.96
TGFBR3-207ENST00000525962 MT2AP02795 61 aa2.76□□□□□ -1.97
TGFBR3-207ENST00000525962 LCE2CQ5TA81 110 aa2.76□□□□□ -1.97
TGFBR3-207ENST00000525962 MT1HP80294 61 aa2.76□□□□□ -1.97
TGFBR3-207ENST00000525962 KRTAP19-1Q8IUB9 90 aa2.76□□□□□ -1.97
TGFBR3-207ENST00000525962 SPRR5A0A1B0GTR4 108 aa2.73□□□□□ -1.97
TGFBR3-207ENST00000525962 SPRR2GQ9BYE4 73 aa2.72□□□□□ -1.97
TGFBR3-207ENST00000525962 KRTAP19-2Q3LHN2 52 aa2.7□□□□□ -1.98
TGFBR3-207ENST00000525962 KRTAP10-7P60409 375 aaPredicted RBP2.7□□□□□ -1.98
TGFBR3-207ENST00000525962 USH2AO75445 5202 aa2.67□□□□□ -1.98
TGFBR3-207ENST00000525962 SYNE1Q8NF91 8797 aaKnown RBP2.67□□□□□ -1.98
TGFBR3-207ENST00000525962 KMT2DO14686 5537 aa2.65□□□□□ -1.98
TGFBR3-207ENST00000525962 KRTAP19-5Q3LI72 72 aa2.65□□□□□ -1.99
TGFBR3-207ENST00000525962 LCE2AQ5TA79 106 aaPredicted RBP2.63□□□□□ -1.99
TGFBR3-207ENST00000525962 KRTAP8-1Q8IUC2 63 aa2.63□□□□□ -1.99
TGFBR3-207ENST00000525962 KRTAP4-8A0A0G2JLE6 195 aa2.63□□□□□ -1.99
TGFBR3-207ENST00000525962 KRTAP4-8Q9BYQ9 185 aa2.63□□□□□ -1.99
TGFBR3-207ENST00000525962 KRTAP10-5P60370 271 aa2.62□□□□□ -1.99
TGFBR3-207ENST00000525962 MT1XP80297 61 aa2.62□□□□□ -1.99
TGFBR3-207ENST00000525962 DSTQ03001 7570 aaKnown RBP2.6□□□□□ -1.99
TGFBR3-207ENST00000525962 MT1BP07438 61 aa2.6□□□□□ -1.99
TGFBR3-207ENST00000525962 KRTAP9-8Q9BYQ0 159 aa2.6□□□□□ -1.99
TGFBR3-207ENST00000525962 KRTAP4-7Q9BYR0 210 aa2.59□□□□□ -1.99
TGFBR3-207ENST00000525962 FCGBPQ9Y6R7 5405 aaPredicted RBP2.55□□□□□ -2
TGFBR3-207ENST00000525962 LCE3CQ5T5A8 94 aa2.55□□□□□ -2
TGFBR3-207ENST00000525962 KRTAP19-8Q3LI54 63 aa2.52□□□□□ -2.01
TGFBR3-207ENST00000525962 KRTAP9-3Q9BYQ3 159 aa2.47□□□□□ -2.01
TGFBR3-207ENST00000525962 MT1GP13640 62 aa2.42□□□□□ -2.02
TGFBR3-207ENST00000525962 LOC100996750A0A140TA64 210 aa2.39□□□□□ -2.03
TGFBR3-207ENST00000525962 KRTAP9-2Q9BYQ4 174 aa2.39□□□□□ -2.03
TGFBR3-207ENST00000525962 KRTAP4-3Q9BYR4 195 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 164.6 ms