RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-222ENST00000524226 A8MU10 97 aa1.42□□□□□ -2.18
PCM1-222ENST00000524226 STAB2Q8WWQ8 2551 aa1.42□□□□□ -2.18
PCM1-222ENST00000524226 DNAH5Q8TE73 4624 aa1.41□□□□□ -2.18
PCM1-222ENST00000524226 TPRXLQ17RH7 258 aa1.41□□□□□ -2.18
PCM1-222ENST00000524226 COL7A1Q02388 2944 aa1.41□□□□□ -2.18
PCM1-222ENST00000524226 KRTAP10-10P60014 251 aa1.4□□□□□ -2.18
PCM1-222ENST00000524226 PRO2289Q9P1D8 64 aa1.4□□□□□ -2.19
PCM1-222ENST00000524226 FAT2Q9NYQ8 4349 aa1.4□□□□□ -2.19
PCM1-222ENST00000524226 P0C880 135 aa1.4□□□□□ -2.19
PCM1-222ENST00000524226 PKD1P98161 4303 aa1.4□□□□□ -2.19
PCM1-222ENST00000524226 LCE2AQ5TA79 106 aaPredicted RBP1.4□□□□□ -2.19
PCM1-222ENST00000524226 LOC100996750A0A140TA64 210 aa1.39□□□□□ -2.19
PCM1-222ENST00000524226 KRTAP4-6Q9BYQ5 205 aa1.39□□□□□ -2.19
PCM1-222ENST00000524226 FBN3Q75N90 2809 aa1.38□□□□□ -2.19
PCM1-222ENST00000524226 PKHD1L1Q86WI1 4243 aa1.38□□□□□ -2.19
PCM1-222ENST00000524226 TENM2Q9NT68 2774 aa1.38□□□□□ -2.19
PCM1-222ENST00000524226 SACSQ9NZJ4 4579 aa1.38□□□□□ -2.19
PCM1-222ENST00000524226 HYDINQ4G0P3 5121 aa1.38□□□□□ -2.19
PCM1-222ENST00000524226 KRTAP10-4P60372 401 aaPredicted RBP1.37□□□□□ -2.19
PCM1-222ENST00000524226 DYNC1H1Q14204 4646 aaKnown RBP1.37□□□□□ -2.19
PCM1-222ENST00000524226 KRTAP13-3Q3SY46 172 aa1.37□□□□□ -2.19
PCM1-222ENST00000524226 LRP1BQ9NZR2 4599 aa1.36□□□□□ -2.19
PCM1-222ENST00000524226 KRTAP10-8P60410 259 aa1.36□□□□□ -2.19
PCM1-222ENST00000524226 XP32Q5T750 250 aa1.36□□□□□ -2.19
PCM1-222ENST00000524226 VPS13BQ7Z7G8 4022 aa1.35□□□□□ -2.19
PCM1-222ENST00000524226 HSPG2P98160 4391 aa1.35□□□□□ -2.19
PCM1-222ENST00000524226 RYR2Q92736 4967 aa1.35□□□□□ -2.19
PCM1-222ENST00000524226 APOBP04114 4563 aaKnown RBP1.35□□□□□ -2.19
PCM1-222ENST00000524226 PKHD1P08F94 4074 aa1.34□□□□□ -2.2
PCM1-222ENST00000524226 H0YAA0 97 aa1.34□□□□□ -2.2
PCM1-222ENST00000524226 KRTAP4-5Q9BYR2 181 aa1.33□□□□□ -2.2
PCM1-222ENST00000524226 TGP01266 2768 aa1.33□□□□□ -2.2
PCM1-222ENST00000524226 KRTAP19-4Q3LI73 84 aa1.32□□□□□ -2.2
PCM1-222ENST00000524226 MT1HL1P0DM35 61 aa1.31□□□□□ -2.2
PCM1-222ENST00000524226 SRRM2Q9UQ35 2752 aaKnown RBP1.3□□□□□ -2.2
PCM1-222ENST00000524226 FAT1Q14517 4588 aa1.3□□□□□ -2.2
PCM1-222ENST00000524226 FAT3Q8TDW7 4589 aa1.3□□□□□ -2.2
PCM1-222ENST00000524226 INE1O15225 51 aa1.3□□□□□ -2.2
PCM1-222ENST00000524226 KRTAP13-4Q3LI77 160 aa1.3□□□□□ -2.2
PCM1-222ENST00000524226 TNXBP22105 4242 aa1.29□□□□□ -2.2
PCM1-222ENST00000524226 LORP23490 312 aaPredicted RBP1.28□□□□□ -2.2
PCM1-222ENST00000524226 RYR1P21817 5038 aa1.28□□□□□ -2.21
PCM1-222ENST00000524226 KRTAP3-1Q9BYR8 98 aa1.27□□□□□ -2.21
PCM1-222ENST00000524226 KMT2CQ8NEZ4 4911 aaKnown RBP1.26□□□□□ -2.21
PCM1-222ENST00000524226 KRTAP12-2P59991 146 aa1.26□□□□□ -2.21
PCM1-222ENST00000524226 RYR3Q15413 4870 aa1.26□□□□□ -2.21
PCM1-222ENST00000524226 KRTAP9-6A0A140TA67 174 aa1.24□□□□□ -2.21
PCM1-222ENST00000524226 KRTAP15-1Q3LI76 137 aa1.24□□□□□ -2.21
PCM1-222ENST00000524226 KRTAP12-1P59990 96 aa1.23□□□□□ -2.21
PCM1-222ENST00000524226 KRTAP9-8Q9BYQ0 159 aa1.23□□□□□ -2.21
PCM1-222ENST00000524226 MUC17Q685J3 4493 aa1.23□□□□□ -2.21
PCM1-222ENST00000524226 LRP1Q07954 4544 aaKnown RBP1.22□□□□□ -2.21
PCM1-222ENST00000524226 KRTAP5-3Q6L8H2 238 aa1.22□□□□□ -2.21
PCM1-222ENST00000524226 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.21□□□□□ -2.22
PCM1-222ENST00000524226 EPPK1P58107 5090 aaKnown RBP1.21□□□□□ -2.22
PCM1-222ENST00000524226 MYCBP2O75592 4640 aa1.21□□□□□ -2.22
PCM1-222ENST00000524226 BIRC6Q9NR09 4857 aa1.21□□□□□ -2.22
PCM1-222ENST00000524226 KRTAP10-6P60371 365 aaPredicted RBP1.2□□□□□ -2.22
PCM1-222ENST00000524226 KIAA1109Q2LD37 5005 aa1.19□□□□□ -2.22
PCM1-222ENST00000524226 PCLOQ9Y6V0 5065 aa1.19□□□□□ -2.22
PCM1-222ENST00000524226 HERC2O95714 4834 aa1.18□□□□□ -2.22
PCM1-222ENST00000524226 KRTAP4-1Q9BYQ7 146 aa1.18□□□□□ -2.22
PCM1-222ENST00000524226 LPAP08519 4548 aa1.17□□□□□ -2.22
PCM1-222ENST00000524226 MT3P25713 68 aa1.17□□□□□ -2.22
PCM1-222ENST00000524226 KRTAP10-12P60413 245 aa1.16□□□□□ -2.22
PCM1-222ENST00000524226 KRTAP8-1Q8IUC2 63 aa1.16□□□□□ -2.22
PCM1-222ENST00000524226 ABCA13Q86UQ4 5058 aa1.16□□□□□ -2.22
PCM1-222ENST00000524226 KRTAP5-2Q701N4 177 aa1.13□□□□□ -2.23
PCM1-222ENST00000524226 KRTAP12-3P60328 96 aa1.13□□□□□ -2.23
PCM1-222ENST00000524226 CRCT1Q9UGL9 99 aa1.13□□□□□ -2.23
PCM1-222ENST00000524226 LRP2P98164 4655 aa1.13□□□□□ -2.23
PCM1-222ENST00000524226 HERC1Q15751 4861 aa1.13□□□□□ -2.23
PCM1-222ENST00000524226 MT1HP80294 61 aa1.12□□□□□ -2.23
PCM1-222ENST00000524226 KRTAP19-2Q3LHN2 52 aa1.11□□□□□ -2.23
PCM1-222ENST00000524226 KRTAP9-2Q9BYQ4 174 aa1.11□□□□□ -2.23
PCM1-222ENST00000524226 SPRR2EP22531 72 aa1.11□□□□□ -2.23
PCM1-222ENST00000524226 SPRR2BP35325 72 aa1.11□□□□□ -2.23
PCM1-222ENST00000524226 SPRR2AP35326 72 aa1.11□□□□□ -2.23
PCM1-222ENST00000524226 KRTAP4-2Q9BYR5 136 aa1.11□□□□□ -2.23
PCM1-222ENST00000524226 FLGP20930 4061 aaPredicted RBP1.1□□□□□ -2.23
PCM1-222ENST00000524226 KRTAP10-7P60409 375 aaPredicted RBP1.1□□□□□ -2.23
PCM1-222ENST00000524226 LCE4AQ5TA78 99 aa1.1□□□□□ -2.23
PCM1-222ENST00000524226 SPRR2FQ96RM1 72 aa1.09□□□□□ -2.23
PCM1-222ENST00000524226 HMCN2Q8NDA2 5059 aa1.09□□□□□ -2.23
PCM1-222ENST00000524226 KRTAP4-8Q9BYQ9 185 aa1.09□□□□□ -2.23
PCM1-222ENST00000524226 SPRR2DP22532 72 aa1.08□□□□□ -2.24
PCM1-222ENST00000524226 SPRR2GQ9BYE4 73 aa1.08□□□□□ -2.24
PCM1-222ENST00000524226 MT2AP02795 61 aa1.08□□□□□ -2.24
PCM1-222ENST00000524226 OBSCNQ5VST9 7968 aa1.08□□□□□ -2.24
PCM1-222ENST00000524226 MT1FP04733 61 aa1.07□□□□□ -2.24
PCM1-222ENST00000524226 LCE3AQ5TA76 89 aa1.07□□□□□ -2.24
PCM1-222ENST00000524226 KRTAP10-5P60370 271 aa1.06□□□□□ -2.24
PCM1-222ENST00000524226 KRTAP9-9Q9BYP9 154 aa1.06□□□□□ -2.24
PCM1-222ENST00000524226 KRTAP9-4Q9BYQ2 154 aa1.06□□□□□ -2.24
PCM1-222ENST00000524226 KRTAP9-7A8MTY7 169 aa1.06□□□□□ -2.24
PCM1-222ENST00000524226 LCE3BQ5TA77 95 aa1.06□□□□□ -2.24
PCM1-222ENST00000524226 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.05□□□□□ -2.24
PCM1-222ENST00000524226 GPR98Q8WXG9 6306 aa1.05□□□□□ -2.24
PCM1-222ENST00000524226 KRTAP19-1Q8IUB9 90 aa1.04□□□□□ -2.24
PCM1-222ENST00000524226 RNF213Q63HN8 5207 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms