RNA–Protein interactions for RNA: ENST00000523647.1

SMARCE1P4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 4, humanhuman

BASIC

Gene SMARCE1P4, Length 241 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P4-201ENST00000523647 FAT3Q8TDW7 4589 aa0.59□□□□□ -2.32
SMARCE1P4-201ENST00000523647 ZANQ9Y493 2812 aa0.59□□□□□ -2.32
SMARCE1P4-201ENST00000523647 DNAH7Q8WXX0 4024 aa0.58□□□□□ -2.32
SMARCE1P4-201ENST00000523647 PKHD1P08F94 4074 aa0.57□□□□□ -2.32
SMARCE1P4-201ENST00000523647 LRP1BQ9NZR2 4599 aa0.57□□□□□ -2.32
SMARCE1P4-201ENST00000523647 AKAP9Q99996 3911 aa0.57□□□□□ -2.32
SMARCE1P4-201ENST00000523647 ACACBO00763 2458 aa0.57□□□□□ -2.32
SMARCE1P4-201ENST00000523647 COL6A3P12111 3177 aa0.56□□□□□ -2.32
SMARCE1P4-201ENST00000523647 TMEM167AQ8TBQ9 72 aa0.55□□□□□ -2.32
SMARCE1P4-201ENST00000523647 TEP1Q99973 2627 aaKnown RBP0.55□□□□□ -2.32
SMARCE1P4-201ENST00000523647 HTTP42858 3142 aa0.55□□□□□ -2.32
SMARCE1P4-201ENST00000523647 SVEP1Q4LDE5 3571 aa0.54□□□□□ -2.32
SMARCE1P4-201ENST00000523647 FAT4Q6V0I7 4981 aa0.54□□□□□ -2.32
SMARCE1P4-201ENST00000523647 SMR3BP02814 79 aaPredicted RBP0.53□□□□□ -2.32
SMARCE1P4-201ENST00000523647 SPRR2EP22531 72 aa0.53□□□□□ -2.32
SMARCE1P4-201ENST00000523647 KRTAP19-5Q3LI72 72 aa0.53□□□□□ -2.32
SMARCE1P4-201ENST00000523647 TRIOO75962 3097 aa0.53□□□□□ -2.33
SMARCE1P4-201ENST00000523647 SPG11Q96JI7 2443 aa0.53□□□□□ -2.33
SMARCE1P4-201ENST00000523647 FASNP49327 2511 aaKnown RBP0.53□□□□□ -2.33
SMARCE1P4-201ENST00000523647 DNAH1Q9P2D7 4330 aa0.52□□□□□ -2.33
SMARCE1P4-201ENST00000523647 MYO18BQ8IUG5 2567 aa0.51□□□□□ -2.33
SMARCE1P4-201ENST00000523647 MAP1AP78559 2803 aaPredicted RBP0.51□□□□□ -2.33
SMARCE1P4-201ENST00000523647 HMCN2Q8NDA2 5059 aa0.5□□□□□ -2.33
SMARCE1P4-201ENST00000523647 WDR87Q6ZQQ6 2873 aa0.5□□□□□ -2.33
SMARCE1P4-201ENST00000523647 TGP01266 2768 aa0.5□□□□□ -2.33
SMARCE1P4-201ENST00000523647 SPRR2FQ96RM1 72 aa0.5□□□□□ -2.33
SMARCE1P4-201ENST00000523647 FLNAP21333 2647 aaKnown RBP0.49□□□□□ -2.33
SMARCE1P4-201ENST00000523647 FAT1Q14517 4588 aa0.48□□□□□ -2.33
SMARCE1P4-201ENST00000523647 MXRA5Q9NR99 2828 aa0.48□□□□□ -2.33
SMARCE1P4-201ENST00000523647 DNAH10Q8IVF4 4471 aa0.48□□□□□ -2.33
SMARCE1P4-201ENST00000523647 ITPR1Q14643 2758 aa0.47□□□□□ -2.33
SMARCE1P4-201ENST00000523647 MGAQ8IWI9 3026 aa0.47□□□□□ -2.33
SMARCE1P4-201ENST00000523647 PHGR1C9JFL3 82 aa0.47□□□□□ -2.33
SMARCE1P4-201ENST00000523647 RELNP78509 3460 aa0.47□□□□□ -2.33
SMARCE1P4-201ENST00000523647 CSMD1Q96PZ7 3565 aa0.46□□□□□ -2.34
SMARCE1P4-201ENST00000523647 AHNAK2Q8IVF2 5795 aa0.46□□□□□ -2.34
SMARCE1P4-201ENST00000523647 MAST4O15021 2626 aa0.46□□□□□ -2.34
SMARCE1P4-201ENST00000523647 TLN2Q9Y4G6 2542 aa0.45□□□□□ -2.34
SMARCE1P4-201ENST00000523647 LAMA1P25391 3075 aa0.45□□□□□ -2.34
SMARCE1P4-201ENST00000523647 USP9XQ93008 2570 aaPredicted RBP0.45□□□□□ -2.34
SMARCE1P4-201ENST00000523647 CFAP54Q96N23 3096 aa0.44□□□□□ -2.34
SMARCE1P4-201ENST00000523647 DMXL2Q8TDJ6 3036 aa0.43□□□□□ -2.34
SMARCE1P4-201ENST00000523647 LRP2P98164 4655 aa0.43□□□□□ -2.34
SMARCE1P4-201ENST00000523647 RHPN1-AS1Q9BWJ2 59 aa0.41□□□□□ -2.34
SMARCE1P4-201ENST00000523647 MGAM2Q2M2H8 2515 aa0.4□□□□□ -2.34
SMARCE1P4-201ENST00000523647 PLECQ15149 4684 aaKnown RBP0.4□□□□□ -2.34
SMARCE1P4-201ENST00000523647 RPL39P5Q59GN2 51 aa0.4□□□□□ -2.35
SMARCE1P4-201ENST00000523647 ADGRG4Q8IZF6 3080 aa0.4□□□□□ -2.35
SMARCE1P4-201ENST00000523647 H3BUX3 64 aa0.39□□□□□ -2.35
SMARCE1P4-201ENST00000523647 CMYA5Q8N3K9 4069 aa0.38□□□□□ -2.35
SMARCE1P4-201ENST00000523647 LAMA3Q16787 3333 aa0.38□□□□□ -2.35
SMARCE1P4-201ENST00000523647 NBEAL1Q6ZS30 2694 aa0.36□□□□□ -2.35
SMARCE1P4-201ENST00000523647 SMG1Q96Q15 3661 aaKnown RBP0.36□□□□□ -2.35
SMARCE1P4-201ENST00000523647 ATMQ13315 3056 aa0.34□□□□□ -2.35
SMARCE1P4-201ENST00000523647 DEFB1P60022 68 aa0.34□□□□□ -2.36
SMARCE1P4-201ENST00000523647 STAB2Q8WWQ8 2551 aa0.34□□□□□ -2.36
SMARCE1P4-201ENST00000523647 DEFB108AA8MXU0 73 aa0.33□□□□□ -2.36
SMARCE1P4-201ENST00000523647 DYNC1H1Q14204 4646 aaKnown RBP0.33□□□□□ -2.36
SMARCE1P4-201ENST00000523647 A0A096LNI7 61 aa0.32□□□□□ -2.36
SMARCE1P4-201ENST00000523647 DNAH17Q9UFH2 4485 aa0.32□□□□□ -2.36
SMARCE1P4-201ENST00000523647 LRBAP50851 2863 aa0.31□□□□□ -2.36
SMARCE1P4-201ENST00000523647 TRRAPQ9Y4A5 3859 aa0.31□□□□□ -2.36
SMARCE1P4-201ENST00000523647 NIPBLQ6KC79 2804 aaeCLIP0.3□□□□□ -2.36
SMARCE1P4-201ENST00000523647 DEFB136Q30KP8 78 aa0.3□□□□□ -2.36
SMARCE1P4-201ENST00000523647 DEFB124Q8NES8 71 aa0.3□□□□□ -2.36
SMARCE1P4-201ENST00000523647 CEP250Q9BV73 2442 aa0.29□□□□□ -2.36
SMARCE1P4-201ENST00000523647 HERC1Q15751 4861 aa0.29□□□□□ -2.36
SMARCE1P4-201ENST00000523647 MDN1Q9NU22 5596 aa0.29□□□□□ -2.36
SMARCE1P4-201ENST00000523647 TEX15Q9BXT5 2789 aa0.28□□□□□ -2.36
SMARCE1P4-201ENST00000523647 MT1HP80294 61 aa0.28□□□□□ -2.36
SMARCE1P4-201ENST00000523647 C5orf42Q9H799 3197 aa0.28□□□□□ -2.37
SMARCE1P4-201ENST00000523647 MUC5BQ9HC84 5762 aaPredicted RBP0.27□□□□□ -2.37
SMARCE1P4-201ENST00000523647 MUC17Q685J3 4493 aa0.27□□□□□ -2.37
SMARCE1P4-201ENST00000523647 DNAH12Q6ZR08 3092 aa0.27□□□□□ -2.37
SMARCE1P4-201ENST00000523647 MT1EP04732 61 aa0.25□□□□□ -2.37
SMARCE1P4-201ENST00000523647 DNAH5Q8TE73 4624 aa0.25□□□□□ -2.37
SMARCE1P4-201ENST00000523647 FRYLO94915 3013 aa0.24□□□□□ -2.37
SMARCE1P4-201ENST00000523647 SPTAN1Q13813 2472 aaKnown RBP0.24□□□□□ -2.37
SMARCE1P4-201ENST00000523647 PRUNE2Q8WUY3 3088 aa0.23□□□□□ -2.37
SMARCE1P4-201ENST00000523647 SSPOA2VEC9 5147 aa0.22□□□□□ -2.37
SMARCE1P4-201ENST00000523647 DMDP11532 3685 aa0.22□□□□□ -2.37
SMARCE1P4-201ENST00000523647 KMT2DO14686 5537 aa0.21□□□□□ -2.38
SMARCE1P4-201ENST00000523647 VPS13CQ709C8 3753 aa0.21□□□□□ -2.38
SMARCE1P4-201ENST00000523647 ITPR2Q14571 2701 aa0.21□□□□□ -2.38
SMARCE1P4-201ENST00000523647 DOPEY1Q5JWR5 2465 aa0.2□□□□□ -2.38
SMARCE1P4-201ENST00000523647 MT1LQ93083 61 aa0.19□□□□□ -2.38
SMARCE1P4-201ENST00000523647 MUC5ACP98088 5654 aa0.18□□□□□ -2.38
SMARCE1P4-201ENST00000523647 CSMD2Q7Z408 3487 aa0.17□□□□□ -2.38
SMARCE1P4-201ENST00000523647 STARD9Q9P2P6 4700 aa0.17□□□□□ -2.38
SMARCE1P4-201ENST00000523647 PCLOQ9Y6V0 5065 aa0.17□□□□□ -2.38
SMARCE1P4-201ENST00000523647 APELAP0DMC3 54 aa0.16□□□□□ -2.38
SMARCE1P4-201ENST00000523647 HTN1P15515 57 aa0.16□□□□□ -2.38
SMARCE1P4-201ENST00000523647 DEFB133Q30KQ1 61 aa0.16□□□□□ -2.38
SMARCE1P4-201ENST00000523647 CFAP46Q8IYW2 2715 aa0.16□□□□□ -2.38
SMARCE1P4-201ENST00000523647 SRCAPQ6ZRS2 3230 aa0.15□□□□□ -2.39
SMARCE1P4-201ENST00000523647 RPS29P62273 56 aaKnown RBP0.14□□□□□ -2.39
SMARCE1P4-201ENST00000523647 KMT2CQ8NEZ4 4911 aaKnown RBP0.14□□□□□ -2.39
SMARCE1P4-201ENST00000523647 MUC3AQ02505 3323 aa0.13□□□□□ -2.39
SMARCE1P4-201ENST00000523647 SPRR2GQ9BYE4 73 aa0.13□□□□□ -2.39
SMARCE1P4-201ENST00000523647 SZT2Q5T011 3432 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms