RNA–Protein interactions for RNA: ENST00000523622.1

NPM1-211, Transcript of nucleophosmin 1, humanhuman

TSL 3

Gene NPM1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-211ENST00000523622 HECTD4Q9Y4D8 3996 aa1.82□□□□□ -2.12
NPM1-211ENST00000523622 VPS13AQ96RL7 3174 aa1.82□□□□□ -2.12
NPM1-211ENST00000523622 CUBNO60494 3623 aa1.81□□□□□ -2.12
NPM1-211ENST00000523622 ACACBO00763 2458 aa1.81□□□□□ -2.12
NPM1-211ENST00000523622 FREM2Q5SZK8 3169 aa1.81□□□□□ -2.12
NPM1-211ENST00000523622 PRM1P04553 51 aa1.81□□□□□ -2.12
NPM1-211ENST00000523622 FAT3Q8TDW7 4589 aa1.81□□□□□ -2.12
NPM1-211ENST00000523622 DCHS1Q96JQ0 3298 aa1.81□□□□□ -2.12
NPM1-211ENST00000523622 KALRNO60229 2985 aa1.8□□□□□ -2.12
NPM1-211ENST00000523622 ZFYVE26Q68DK2 2539 aa1.8□□□□□ -2.12
NPM1-211ENST00000523622 NSD1Q96L73 2696 aaPredicted RBP1.8□□□□□ -2.12
NPM1-211ENST00000523622 PKD1L1Q8TDX9 2849 aa1.8□□□□□ -2.12
NPM1-211ENST00000523622 HSPG2P98160 4391 aa1.8□□□□□ -2.12
NPM1-211ENST00000523622 HIVEP1P15822 2718 aa1.8□□□□□ -2.12
NPM1-211ENST00000523622 SRCAPQ6ZRS2 3230 aa1.79□□□□□ -2.12
NPM1-211ENST00000523622 USP9XQ93008 2570 aaPredicted RBP1.79□□□□□ -2.12
NPM1-211ENST00000523622 NIPBLQ6KC79 2804 aaeCLIP1.79□□□□□ -2.12
NPM1-211ENST00000523622 ANKRD11Q6UB99 2663 aaPredicted RBP1.78□□□□□ -2.12
NPM1-211ENST00000523622 DNAH6Q9C0G6 4158 aa1.78□□□□□ -2.12
NPM1-211ENST00000523622 TLN2Q9Y4G6 2542 aa1.77□□□□□ -2.13
NPM1-211ENST00000523622 FBN3Q75N90 2809 aa1.77□□□□□ -2.13
NPM1-211ENST00000523622 DNAH1Q9P2D7 4330 aa1.76□□□□□ -2.13
NPM1-211ENST00000523622 RPS29P62273 56 aaKnown RBP1.76□□□□□ -2.13
NPM1-211ENST00000523622 TGP01266 2768 aa1.76□□□□□ -2.13
NPM1-211ENST00000523622 GOLGB1Q14789 3259 aaKnown RBP1.76□□□□□ -2.13
NPM1-211ENST00000523622 SPEGQ15772 3267 aa1.76□□□□□ -2.13
NPM1-211ENST00000523622 HUWE1Q7Z6Z7 4374 aaKnown RBP1.75□□□□□ -2.13
NPM1-211ENST00000523622 PKD1P98161 4303 aa1.75□□□□□ -2.13
NPM1-211ENST00000523622 PLECQ15149 4684 aaKnown RBP1.74□□□□□ -2.13
NPM1-211ENST00000523622 TEP1Q99973 2627 aaKnown RBP1.73□□□□□ -2.13
NPM1-211ENST00000523622 MXRA5Q9NR99 2828 aa1.73□□□□□ -2.13
NPM1-211ENST00000523622 CENPEQ02224 2701 aa1.73□□□□□ -2.13
NPM1-211ENST00000523622 XIRP2A4UGR9 3374 aa1.73□□□□□ -2.13
NPM1-211ENST00000523622 LCE3AQ5TA76 89 aa1.73□□□□□ -2.13
NPM1-211ENST00000523622 UNC79Q9P2D8 2635 aa1.73□□□□□ -2.13
NPM1-211ENST00000523622 MYO18BQ8IUG5 2567 aa1.73□□□□□ -2.13
NPM1-211ENST00000523622 OBSCNQ5VST9 7968 aa1.73□□□□□ -2.13
NPM1-211ENST00000523622 CMYA5Q8N3K9 4069 aa1.72□□□□□ -2.13
NPM1-211ENST00000523622 WDFY4Q6ZS81 3184 aa1.72□□□□□ -2.13
NPM1-211ENST00000523622 HTN3P15516 51 aa1.72□□□□□ -2.13
NPM1-211ENST00000523622 U3KQA8 63 aa1.72□□□□□ -2.13
NPM1-211ENST00000523622 DNAH9Q9NYC9 4486 aa1.72□□□□□ -2.13
NPM1-211ENST00000523622 ITPR2Q14571 2701 aa1.72□□□□□ -2.13
NPM1-211ENST00000523622 DOPEY1Q5JWR5 2465 aa1.72□□□□□ -2.13
NPM1-211ENST00000523622 APOBP04114 4563 aaKnown RBP1.71□□□□□ -2.14
NPM1-211ENST00000523622 NOTCH1P46531 2555 aa1.71□□□□□ -2.14
NPM1-211ENST00000523622 MUC3AQ02505 3323 aa1.7□□□□□ -2.14
NPM1-211ENST00000523622 TENM3Q9P273 2699 aa1.7□□□□□ -2.14
NPM1-211ENST00000523622 SVEP1Q4LDE5 3571 aa1.7□□□□□ -2.14
NPM1-211ENST00000523622 FLNAP21333 2647 aaKnown RBP1.7□□□□□ -2.14
NPM1-211ENST00000523622 LAMA3Q16787 3333 aa1.69□□□□□ -2.14
NPM1-211ENST00000523622 TEX15Q9BXT5 2789 aa1.69□□□□□ -2.14
NPM1-211ENST00000523622 HRNRQ86YZ3 2850 aaPredicted RBP1.68□□□□□ -2.14
NPM1-211ENST00000523622 UTRNP46939 3433 aa1.68□□□□□ -2.14
NPM1-211ENST00000523622 DNAH5Q8TE73 4624 aa1.68□□□□□ -2.14
NPM1-211ENST00000523622 LCE1CQ5T751 118 aa1.67□□□□□ -2.14
NPM1-211ENST00000523622 LCE1BQ5T7P3 118 aa1.67□□□□□ -2.14
NPM1-211ENST00000523622 KRTAP5-2Q701N4 177 aa1.67□□□□□ -2.14
NPM1-211ENST00000523622 LAMA1P25391 3075 aa1.66□□□□□ -2.14
NPM1-211ENST00000523622 SPTAN1Q13813 2472 aaKnown RBP1.66□□□□□ -2.14
NPM1-211ENST00000523622 LRP1Q07954 4544 aaKnown RBP1.65□□□□□ -2.14
NPM1-211ENST00000523622 TRRAPQ9Y4A5 3859 aa1.65□□□□□ -2.15
NPM1-211ENST00000523622 FLNBO75369 2602 aaKnown RBP1.65□□□□□ -2.15
NPM1-211ENST00000523622 PKHD1P08F94 4074 aa1.65□□□□□ -2.15
NPM1-211ENST00000523622 SMR3BP02814 79 aaPredicted RBP1.64□□□□□ -2.15
NPM1-211ENST00000523622 CSMD2Q7Z408 3487 aa1.64□□□□□ -2.15
NPM1-211ENST00000523622 FASNP49327 2511 aaKnown RBP1.64□□□□□ -2.15
NPM1-211ENST00000523622 ADGRG4Q8IZF6 3080 aa1.63□□□□□ -2.15
NPM1-211ENST00000523622 DNAH17Q9UFH2 4485 aa1.62□□□□□ -2.15
NPM1-211ENST00000523622 TLN1Q9Y490 2541 aaKnown RBP1.62□□□□□ -2.15
NPM1-211ENST00000523622 USP34Q70CQ2 3546 aa1.62□□□□□ -2.15
NPM1-211ENST00000523622 KRTAP5-5Q701N2 237 aaPredicted RBP1.62□□□□□ -2.15
NPM1-211ENST00000523622 KRTAP4-3Q9BYR4 195 aa1.62□□□□□ -2.15
NPM1-211ENST00000523622 NBEAL1Q6ZS30 2694 aa1.61□□□□□ -2.15
NPM1-211ENST00000523622 KRTAP19-3Q7Z4W3 81 aa1.6□□□□□ -2.15
NPM1-211ENST00000523622 EP400Q96L91 3159 aa1.6□□□□□ -2.15
NPM1-211ENST00000523622 LOC400499M0QZD8 3231 aa1.6□□□□□ -2.15
NPM1-211ENST00000523622 STAB2Q8WWQ8 2551 aa1.59□□□□□ -2.15
NPM1-211ENST00000523622 DEFB4AO15263 64 aa1.59□□□□□ -2.15
NPM1-211ENST00000523622 ASPMQ8IZT6 3477 aa1.58□□□□□ -2.16
NPM1-211ENST00000523622 FAT1Q14517 4588 aa1.57□□□□□ -2.16
NPM1-211ENST00000523622 SYNE1Q8NF91 8797 aaKnown RBP1.56□□□□□ -2.16
NPM1-211ENST00000523622 KRTAP19-5Q3LI72 72 aa1.55□□□□□ -2.16
NPM1-211ENST00000523622 MGAM2Q2M2H8 2515 aa1.55□□□□□ -2.16
NPM1-211ENST00000523622 CEP295Q9C0D2 2601 aa1.54□□□□□ -2.16
NPM1-211ENST00000523622 MAST4O15021 2626 aa1.53□□□□□ -2.16
NPM1-211ENST00000523622 DYNC1H1Q14204 4646 aaKnown RBP1.53□□□□□ -2.16
NPM1-211ENST00000523622 LPAP08519 4548 aa1.52□□□□□ -2.17
NPM1-211ENST00000523622 VPS13CQ709C8 3753 aa1.51□□□□□ -2.17
NPM1-211ENST00000523622 LAMA2P24043 3122 aaKnown RBP1.5□□□□□ -2.17
NPM1-211ENST00000523622 MT1AP04731 61 aa1.49□□□□□ -2.17
NPM1-211ENST00000523622 MYO15AQ9UKN7 3530 aa1.48□□□□□ -2.17
NPM1-211ENST00000523622 IGSF10Q6WRI0 2623 aa1.47□□□□□ -2.17
NPM1-211ENST00000523622 VCANP13611 3396 aa1.47□□□□□ -2.17
NPM1-211ENST00000523622 SPRR2DP22532 72 aa1.46□□□□□ -2.18
NPM1-211ENST00000523622 MUC17Q685J3 4493 aa1.45□□□□□ -2.18
NPM1-211ENST00000523622 CENPFP49454 3210 aa1.43□□□□□ -2.18
NPM1-211ENST00000523622 KRTAP5-8O75690 187 aa1.43□□□□□ -2.18
NPM1-211ENST00000523622 SPRR2BP35325 72 aa1.43□□□□□ -2.18
NPM1-211ENST00000523622 KRTAP6-2Q3LI66 62 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms