RNA–Protein interactions for RNA: ENST00000521214.5

SPIDR-213, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-213ENST00000521214 KRTAP1-4P0C5Y4 121 aa4.55□□□□□ -1.68
SPIDR-213ENST00000521214 SPRR1BP22528 89 aa4.55□□□□□ -1.68
SPIDR-213ENST00000521214 KRTAP4-5Q9BYR2 181 aa4.55□□□□□ -1.68
SPIDR-213ENST00000521214 LINC00304Q8N9R0 145 aa4.53□□□□□ -1.68
SPIDR-213ENST00000521214 Q96NJ1 140 aa4.5□□□□□ -1.69
SPIDR-213ENST00000521214 HSPG2P98160 4391 aa4.5□□□□□ -1.69
SPIDR-213ENST00000521214 C20orf166-AS1Q96NR2 134 aa4.49□□□□□ -1.69
SPIDR-213ENST00000521214 Q8N1X5 172 aa4.48□□□□□ -1.69
SPIDR-213ENST00000521214 KRTAP10-4P60372 401 aaPredicted RBP4.44□□□□□ -1.7
SPIDR-213ENST00000521214 LUZP6Q538Z0 58 aa4.44□□□□□ -1.7
SPIDR-213ENST00000521214 A0A1B0GU33 70 aa4.44□□□□□ -1.7
SPIDR-213ENST00000521214 PKHD1L1Q86WI1 4243 aa4.44□□□□□ -1.7
SPIDR-213ENST00000521214 H0YAA0 97 aa4.42□□□□□ -1.7
SPIDR-213ENST00000521214 ABCA13Q86UQ4 5058 aa4.39□□□□□ -1.71
SPIDR-213ENST00000521214 KRTAP13-3Q3SY46 172 aa4.38□□□□□ -1.71
SPIDR-213ENST00000521214 HERC2O95714 4834 aa4.38□□□□□ -1.71
SPIDR-213ENST00000521214 H1FX-AS1Q4G0G2 97 aa4.35□□□□□ -1.71
SPIDR-213ENST00000521214 LPAP08519 4548 aa4.34□□□□□ -1.71
SPIDR-213ENST00000521214 A0A0D9SG42 100 aa4.33□□□□□ -1.72
SPIDR-213ENST00000521214 C10orf95Q9H7T3 257 aa4.33□□□□□ -1.72
SPIDR-213ENST00000521214 LRP2P98164 4655 aa4.33□□□□□ -1.72
SPIDR-213ENST00000521214 HERC1Q15751 4861 aa4.3□□□□□ -1.72
SPIDR-213ENST00000521214 PCLOQ9Y6V0 5065 aa4.3□□□□□ -1.72
SPIDR-213ENST00000521214 MT1HL1P0DM35 61 aa4.29□□□□□ -1.72
SPIDR-213ENST00000521214 KRTAP10-8P60410 259 aa4.29□□□□□ -1.72
SPIDR-213ENST00000521214 TPRXLQ17RH7 258 aa4.27□□□□□ -1.73
SPIDR-213ENST00000521214 MUC2Q02817 5179 aa4.26□□□□□ -1.73
SPIDR-213ENST00000521214 KRTAP15-1Q3LI76 137 aa4.26□□□□□ -1.73
SPIDR-213ENST00000521214 RPL37P61927 97 aaKnown RBP4.25□□□□□ -1.73
SPIDR-213ENST00000521214 BIRC6Q9NR09 4857 aa4.25□□□□□ -1.73
SPIDR-213ENST00000521214 TNXBP22105 4242 aa4.25□□□□□ -1.73
SPIDR-213ENST00000521214 COX6B2Q6YFQ2 88 aa4.22□□□□□ -1.73
SPIDR-213ENST00000521214 XP32Q5T750 250 aa4.19□□□□□ -1.74
SPIDR-213ENST00000521214 RNF213Q63HN8 5207 aa4.18□□□□□ -1.74
SPIDR-213ENST00000521214 SEC61BP60468 96 aaKnown RBP4.16□□□□□ -1.74
SPIDR-213ENST00000521214 RPS29P62273 56 aaKnown RBP4.13□□□□□ -1.75
SPIDR-213ENST00000521214 UBR4Q5T4S7 5183 aa4.12□□□□□ -1.75
SPIDR-213ENST00000521214 FAT4Q6V0I7 4981 aa4.06□□□□□ -1.76
SPIDR-213ENST00000521214 S4R3F8 94 aa4.06□□□□□ -1.76
SPIDR-213ENST00000521214 KRTAP3-1Q9BYR8 98 aa4.02□□□□□ -1.77
SPIDR-213ENST00000521214 KRTAP13-4Q3LI77 160 aa4.01□□□□□ -1.77
SPIDR-213ENST00000521214 PLAC4Q8WY50 150 aa4.01□□□□□ -1.77
SPIDR-213ENST00000521214 KRTAP4-1Q9BYQ7 146 aa4.01□□□□□ -1.77
SPIDR-213ENST00000521214 KRTAP12-2P59991 146 aa3.97□□□□□ -1.77
SPIDR-213ENST00000521214 HMCN2Q8NDA2 5059 aa3.95□□□□□ -1.78
SPIDR-213ENST00000521214 M0R2T5 61 aa3.93□□□□□ -1.78
SPIDR-213ENST00000521214 KRTAP10-6P60371 365 aaPredicted RBP3.93□□□□□ -1.78
SPIDR-213ENST00000521214 CAMK2N1Q7Z7J9 78 aa3.9□□□□□ -1.78
SPIDR-213ENST00000521214 KRTAP12-1P59990 96 aa3.87□□□□□ -1.79
SPIDR-213ENST00000521214 KRTAP3-3Q9BYR6 98 aa3.87□□□□□ -1.79
SPIDR-213ENST00000521214 KRTAP3-2Q9BYR7 98 aa3.87□□□□□ -1.79
SPIDR-213ENST00000521214 FSIP2Q5CZC0 6907 aa3.8□□□□□ -1.8
SPIDR-213ENST00000521214 MUC17Q685J3 4493 aa3.8□□□□□ -1.8
SPIDR-213ENST00000521214 R4GN34 69 aa3.79□□□□□ -1.8
SPIDR-213ENST00000521214 M0QZ58 72 aa3.79□□□□□ -1.8
SPIDR-213ENST00000521214 LORP23490 312 aaPredicted RBP3.75□□□□□ -1.81
SPIDR-213ENST00000521214 LCE2DQ5TA82 110 aaPredicted RBP3.7□□□□□ -1.82
SPIDR-213ENST00000521214 PRO2289Q9P1D8 64 aa3.7□□□□□ -1.82
SPIDR-213ENST00000521214 KRTAP10-10P60014 251 aa3.66□□□□□ -1.82
SPIDR-213ENST00000521214 PP632Q6XCG6 107 aa3.66□□□□□ -1.82
SPIDR-213ENST00000521214 KRTAP19-2Q3LHN2 52 aa3.66□□□□□ -1.82
SPIDR-213ENST00000521214 LCE2CQ5TA81 110 aa3.65□□□□□ -1.82
SPIDR-213ENST00000521214 USH2AO75445 5202 aa3.65□□□□□ -1.83
SPIDR-213ENST00000521214 MT1HP80294 61 aa3.64□□□□□ -1.83
SPIDR-213ENST00000521214 FLGP20930 4061 aaPredicted RBP3.63□□□□□ -1.83
SPIDR-213ENST00000521214 LCE2BO14633 110 aa3.55□□□□□ -1.84
SPIDR-213ENST00000521214 MT1FP04733 61 aa3.54□□□□□ -1.84
SPIDR-213ENST00000521214 LCE2AQ5TA79 106 aaPredicted RBP3.54□□□□□ -1.84
SPIDR-213ENST00000521214 INE1O15225 51 aa3.53□□□□□ -1.84
SPIDR-213ENST00000521214 MT2AP02795 61 aa3.52□□□□□ -1.85
SPIDR-213ENST00000521214 KRTAP23-1A1A580 65 aa3.5□□□□□ -1.85
SPIDR-213ENST00000521214 TNP1P09430 55 aa3.48□□□□□ -1.85
SPIDR-213ENST00000521214 KRTAP9-8Q9BYQ0 159 aa3.46□□□□□ -1.86
SPIDR-213ENST00000521214 KRTAP19-1Q8IUB9 90 aa3.41□□□□□ -1.86
SPIDR-213ENST00000521214 KMT2DO14686 5537 aa3.4□□□□□ -1.87
SPIDR-213ENST00000521214 SPRR5A0A1B0GTR4 108 aa3.38□□□□□ -1.87
SPIDR-213ENST00000521214 KRTAP9-3Q9BYQ3 159 aa3.31□□□□□ -1.88
SPIDR-213ENST00000521214 SPRR2GQ9BYE4 73 aa3.3□□□□□ -1.88
SPIDR-213ENST00000521214 MT1BP07438 61 aa3.28□□□□□ -1.88
SPIDR-213ENST00000521214 SSPOA2VEC9 5147 aa3.24□□□□□ -1.89
SPIDR-213ENST00000521214 MT1XP80297 61 aa3.19□□□□□ -1.9
SPIDR-213ENST00000521214 KRTAP10-7P60409 375 aaPredicted RBP3.19□□□□□ -1.9
SPIDR-213ENST00000521214 KRTAP4-8A0A0G2JLE6 195 aa3.17□□□□□ -1.9
SPIDR-213ENST00000521214 KRTAP10-5P60370 271 aa3.17□□□□□ -1.9
SPIDR-213ENST00000521214 KRTAP4-8Q9BYQ9 185 aa3.17□□□□□ -1.9
SPIDR-213ENST00000521214 KRTAP19-8Q3LI54 63 aa3.16□□□□□ -1.9
SPIDR-213ENST00000521214 LCE3AQ5TA76 89 aa3.16□□□□□ -1.9
SPIDR-213ENST00000521214 DSTQ03001 7570 aaKnown RBP3.13□□□□□ -1.91
SPIDR-213ENST00000521214 SYNE2Q8WXH0 6885 aaKnown RBP3.11□□□□□ -1.91
SPIDR-213ENST00000521214 FCGBPQ9Y6R7 5405 aaPredicted RBP3.1□□□□□ -1.91
SPIDR-213ENST00000521214 KRTAP10-12P60413 245 aa3.1□□□□□ -1.91
SPIDR-213ENST00000521214 MUC12Q9UKN1 5478 aa3.09□□□□□ -1.91
SPIDR-213ENST00000521214 MACF1Q9UPN3 7388 aaKnown RBP3.09□□□□□ -1.91
SPIDR-213ENST00000521214 KRTAP9-2Q9BYQ4 174 aa3.08□□□□□ -1.92
SPIDR-213ENST00000521214 KRTAP9-6A0A140TA67 174 aa3.01□□□□□ -1.93
SPIDR-213ENST00000521214 KRTAP12-3P60328 96 aa3□□□□□ -1.93
SPIDR-213ENST00000521214 KRTAP19-5Q3LI72 72 aa2.99□□□□□ -1.93
SPIDR-213ENST00000521214 KRTAP8-1Q8IUC2 63 aa2.95□□□□□ -1.94
SPIDR-213ENST00000521214 OBSCNQ5VST9 7968 aa2.95□□□□□ -1.94
SPIDR-213ENST00000521214 CRCT1Q9UGL9 99 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms