RNA–Protein interactions for RNA: ENST00000520429.5

CCNC-210, Transcript of cyclin C, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCNC, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-210ENST00000520429 KTN1-AS1Q86SY8 53 aa7.29□□□□□ -1.24
CCNC-210ENST00000520429 ABCA13Q86UQ4 5058 aa7.29□□□□□ -1.24
CCNC-210ENST00000520429 LRP2P98164 4655 aa7.28□□□□□ -1.24
CCNC-210ENST00000520429 RPL37P61927 97 aaKnown RBP7.28□□□□□ -1.24
CCNC-210ENST00000520429 SEC61GP60059 68 aa7.24□□□□□ -1.25
CCNC-210ENST00000520429 H0YAA0 97 aa7.23□□□□□ -1.25
CCNC-210ENST00000520429 ADM2Q7Z4H4 148 aa7.23□□□□□ -1.25
CCNC-210ENST00000520429 KRTAP4-5Q9BYR2 181 aa7.23□□□□□ -1.25
CCNC-210ENST00000520429 KRTAP3-3Q9BYR6 98 aa7.2□□□□□ -1.26
CCNC-210ENST00000520429 PRAC1Q96KF2 57 aa7.18□□□□□ -1.26
CCNC-210ENST00000520429 A0A1B0GU33 70 aa7.16□□□□□ -1.26
CCNC-210ENST00000520429 H1FX-AS1Q4G0G2 97 aa7.13□□□□□ -1.27
CCNC-210ENST00000520429 RBM12B-AS1Q9P1G2 102 aa7.12□□□□□ -1.27
CCNC-210ENST00000520429 KRTAP10-6P60371 365 aaPredicted RBP7.08□□□□□ -1.28
CCNC-210ENST00000520429 KRTAP3-2Q9BYR7 98 aa7.05□□□□□ -1.28
CCNC-210ENST00000520429 S4R3F8 94 aa7.05□□□□□ -1.28
CCNC-210ENST00000520429 KRTAP13-4Q3LI77 160 aa7.03□□□□□ -1.28
CCNC-210ENST00000520429 TPRXLQ17RH7 258 aa7.02□□□□□ -1.29
CCNC-210ENST00000520429 P0C880 135 aa7□□□□□ -1.29
CCNC-210ENST00000520429 HERC2O95714 4834 aa6.97□□□□□ -1.29
CCNC-210ENST00000520429 A0A0D9SG42 100 aa6.93□□□□□ -1.3
CCNC-210ENST00000520429 CSAG1Q6PB30 78 aa6.93□□□□□ -1.3
CCNC-210ENST00000520429 MUC17Q685J3 4493 aa6.9□□□□□ -1.3
CCNC-210ENST00000520429 KRTAP4-1Q9BYQ7 146 aa6.87□□□□□ -1.31
CCNC-210ENST00000520429 MUC2Q02817 5179 aa6.86□□□□□ -1.31
CCNC-210ENST00000520429 CRIPTQ9P021 101 aa6.85□□□□□ -1.31
CCNC-210ENST00000520429 J3QL48 77 aa6.79□□□□□ -1.32
CCNC-210ENST00000520429 BIRC6Q9NR09 4857 aa6.78□□□□□ -1.32
CCNC-210ENST00000520429 KRTAP12-2P59991 146 aa6.76□□□□□ -1.33
CCNC-210ENST00000520429 K7ERS5 55 aa6.75□□□□□ -1.33
CCNC-210ENST00000520429 LINC01554Q52M75 96 aa6.75□□□□□ -1.33
CCNC-210ENST00000520429 HERC1Q15751 4861 aa6.74□□□□□ -1.33
CCNC-210ENST00000520429 PCLOQ9Y6V0 5065 aa6.73□□□□□ -1.33
CCNC-210ENST00000520429 SEC61BP60468 96 aaKnown RBP6.72□□□□□ -1.33
CCNC-210ENST00000520429 KRTAP25-1Q3LHN0 102 aa6.71□□□□□ -1.34
CCNC-210ENST00000520429 KRTAP12-1P59990 96 aa6.69□□□□□ -1.34
CCNC-210ENST00000520429 KRTAP19-2Q3LHN2 52 aa6.68□□□□□ -1.34
CCNC-210ENST00000520429 ROMO1P60602 79 aa6.68□□□□□ -1.34
CCNC-210ENST00000520429 LORP23490 312 aaPredicted RBP6.67□□□□□ -1.34
CCNC-210ENST00000520429 SPINT4Q6UDR6 99 aa6.67□□□□□ -1.34
CCNC-210ENST00000520429 C10orf95Q9H7T3 257 aa6.6□□□□□ -1.35
CCNC-210ENST00000520429 M0QZ58 72 aa6.59□□□□□ -1.35
CCNC-210ENST00000520429 HMCN2Q8NDA2 5059 aa6.57□□□□□ -1.36
CCNC-210ENST00000520429 R4GN34 69 aa6.54□□□□□ -1.36
CCNC-210ENST00000520429 FLGP20930 4061 aaPredicted RBP6.52□□□□□ -1.37
CCNC-210ENST00000520429 FAT4Q6V0I7 4981 aa6.51□□□□□ -1.37
CCNC-210ENST00000520429 RNF213Q63HN8 5207 aa6.42□□□□□ -1.38
CCNC-210ENST00000520429 UBR4Q5T4S7 5183 aa6.38□□□□□ -1.39
CCNC-210ENST00000520429 LCE2CQ5TA81 110 aa6.34□□□□□ -1.39
CCNC-210ENST00000520429 H3BS24 57 aa6.2□□□□□ -1.42
CCNC-210ENST00000520429 CAMK2N1Q7Z7J9 78 aa6.18□□□□□ -1.42
CCNC-210ENST00000520429 MT1HP80294 61 aa6.15□□□□□ -1.43
CCNC-210ENST00000520429 M0R2T5 61 aa6.11□□□□□ -1.43
CCNC-210ENST00000520429 KRTAP15-1Q3LI76 137 aa6.11□□□□□ -1.43
CCNC-210ENST00000520429 KRTAP19-1Q8IUB9 90 aa6.09□□□□□ -1.43
CCNC-210ENST00000520429 MT1FP04733 61 aa6.04□□□□□ -1.44
CCNC-210ENST00000520429 SPRR2GQ9BYE4 73 aa6.03□□□□□ -1.44
CCNC-210ENST00000520429 MT2AP02795 61 aa6.02□□□□□ -1.45
CCNC-210ENST00000520429 KRTAP9-8Q9BYQ0 159 aa6□□□□□ -1.45
CCNC-210ENST00000520429 KRTAP10-10P60014 251 aa5.98□□□□□ -1.45
CCNC-210ENST00000520429 A0A0A0MQY5 61 aa5.94□□□□□ -1.46
CCNC-210ENST00000520429 NDUFAF8A1L188 74 aa5.92□□□□□ -1.46
CCNC-210ENST00000520429 PLAC4Q8WY50 150 aa5.9□□□□□ -1.47
CCNC-210ENST00000520429 TNP1P09430 55 aa5.89□□□□□ -1.47
CCNC-210ENST00000520429 PP632Q6XCG6 107 aa5.86□□□□□ -1.47
CCNC-210ENST00000520429 MT1BP07438 61 aa5.8□□□□□ -1.48
CCNC-210ENST00000520429 KRTAP19-8Q3LI54 63 aa5.77□□□□□ -1.48
CCNC-210ENST00000520429 KRTAP9-3Q9BYQ3 159 aa5.74□□□□□ -1.49
CCNC-210ENST00000520429 LCE3AQ5TA76 89 aa5.72□□□□□ -1.49
CCNC-210ENST00000520429 KRTAP10-5P60370 271 aa5.72□□□□□ -1.49
CCNC-210ENST00000520429 MT1XP80297 61 aa5.71□□□□□ -1.49
CCNC-210ENST00000520429 USH2AO75445 5202 aa5.69□□□□□ -1.5
CCNC-210ENST00000520429 KRTAP23-1A1A580 65 aa5.69□□□□□ -1.5
CCNC-210ENST00000520429 LCE2BO14633 110 aa5.59□□□□□ -1.51
CCNC-210ENST00000520429 KRTAP10-7P60409 375 aaPredicted RBP5.58□□□□□ -1.52
CCNC-210ENST00000520429 LCE2DQ5TA82 110 aaPredicted RBP5.56□□□□□ -1.52
CCNC-210ENST00000520429 LCE2AQ5TA79 106 aaPredicted RBP5.53□□□□□ -1.52
CCNC-210ENST00000520429 KMT2DO14686 5537 aa5.52□□□□□ -1.53
CCNC-210ENST00000520429 SPRR5A0A1B0GTR4 108 aa5.51□□□□□ -1.53
CCNC-210ENST00000520429 KRTAP8-1Q8IUC2 63 aa5.5□□□□□ -1.53
CCNC-210ENST00000520429 KRTAP10-12P60413 245 aa5.49□□□□□ -1.53
CCNC-210ENST00000520429 LUZP6Q538Z0 58 aa5.49□□□□□ -1.53
CCNC-210ENST00000520429 KRTAP12-3P60328 96 aa5.4□□□□□ -1.54
CCNC-210ENST00000520429 PRO2289Q9P1D8 64 aa5.36□□□□□ -1.55
CCNC-210ENST00000520429 KRTAP4-8A0A0G2JLE6 195 aa5.33□□□□□ -1.56
CCNC-210ENST00000520429 KRTAP4-8Q9BYQ9 185 aa5.33□□□□□ -1.56
CCNC-210ENST00000520429 FSIP2Q5CZC0 6907 aa5.29□□□□□ -1.56
CCNC-210ENST00000520429 KRTAP19-5Q3LI72 72 aa5.29□□□□□ -1.56
CCNC-210ENST00000520429 SSPOA2VEC9 5147 aa5.21□□□□□ -1.58
CCNC-210ENST00000520429 KRTAP19-7Q3SYF9 63 aa5.1□□□□□ -1.59
CCNC-210ENST00000520429 LCE3CQ5T5A8 94 aa5.08□□□□□ -1.6
CCNC-210ENST00000520429 KRTAP4-7Q9BYR0 210 aa5.06□□□□□ -1.6
CCNC-210ENST00000520429 KRTAP9-6A8MVA2 160 aa5.01□□□□□ -1.61
CCNC-210ENST00000520429 KRTAP19-6Q3LI70 58 aa4.95□□□□□ -1.62
CCNC-210ENST00000520429 FCGBPQ9Y6R7 5405 aaPredicted RBP4.94□□□□□ -1.62
CCNC-210ENST00000520429 MT1EP04732 61 aa4.93□□□□□ -1.62
CCNC-210ENST00000520429 MT1LQ93083 61 aa4.91□□□□□ -1.62
CCNC-210ENST00000520429 MUC12Q9UKN1 5478 aa4.89□□□□□ -1.63
CCNC-210ENST00000520429 KRTAP4-3Q9BYR4 195 aa4.79□□□□□ -1.64
CCNC-210ENST00000520429 KRTAP9-2Q9BYQ4 174 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms