RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 MP68P56378 58 aa2.51□□□□□ -2.01
PABPC1-212ENST00000519622 Q1T7F1 81 aa2.51□□□□□ -2.01
PABPC1-212ENST00000519622 TP53AIP1Q9HCN2 124 aa2.51□□□□□ -2.01
PABPC1-212ENST00000519622 C8orf87E5RJ46 101 aa2.5□□□□□ -2.01
PABPC1-212ENST00000519622 HRES1P13985 223 aa2.49□□□□□ -2.01
PABPC1-212ENST00000519622 PCOTHQ58A44 107 aa2.49□□□□□ -2.01
PABPC1-212ENST00000519622 Q5VV11 94 aa2.49□□□□□ -2.01
PABPC1-212ENST00000519622 SPINK6Q6UWN8 80 aa2.49□□□□□ -2.01
PABPC1-212ENST00000519622 COA5Q86WW8 74 aa2.49□□□□□ -2.01
PABPC1-212ENST00000519622 LRP1Q07954 4544 aaKnown RBP2.47□□□□□ -2.01
PABPC1-212ENST00000519622 LOC101927531A0A1B0GV80 90 aa2.47□□□□□ -2.01
PABPC1-212ENST00000519622 A8MU10 97 aa2.47□□□□□ -2.01
PABPC1-212ENST00000519622 A8MUN3 132 aa2.46□□□□□ -2.02
PABPC1-212ENST00000519622 RPS29P62273 56 aaKnown RBP2.46□□□□□ -2.02
PABPC1-212ENST00000519622 DMAC1Q96GE9 116 aa2.46□□□□□ -2.02
PABPC1-212ENST00000519622 NDUFS5O43920 106 aa2.45□□□□□ -2.02
PABPC1-212ENST00000519622 LINC00313P59037 77 aa2.45□□□□□ -2.02
PABPC1-212ENST00000519622 SPINK1P00995 79 aa2.44□□□□□ -2.02
PABPC1-212ENST00000519622 SMR3BP02814 79 aaPredicted RBP2.44□□□□□ -2.02
PABPC1-212ENST00000519622 LINC00304Q8N9R0 145 aa2.44□□□□□ -2.02
PABPC1-212ENST00000519622 TYMSOSQ8TAI1 123 aa2.44□□□□□ -2.02
PABPC1-212ENST00000519622 LIMD2Q9BT23 127 aa2.44□□□□□ -2.02
PABPC1-212ENST00000519622 PRO0628Q9UI54 55 aa2.44□□□□□ -2.02
PABPC1-212ENST00000519622 LINC01558Q9Y6Z2 57 aa2.44□□□□□ -2.02
PABPC1-212ENST00000519622 FLG2Q5D862 2391 aaPredicted RBP2.44□□□□□ -2.02
PABPC1-212ENST00000519622 A8MUU9 505 aa2.43□□□□□ -2.02
PABPC1-212ENST00000519622 PSPHP1O15172 72 aa2.43□□□□□ -2.02
PABPC1-212ENST00000519622 C20orf166-AS1Q96NR2 134 aa2.43□□□□□ -2.02
PABPC1-212ENST00000519622 KIAA1109Q2LD37 5005 aa2.42□□□□□ -2.02
PABPC1-212ENST00000519622 RETNLBQ9BQ08 111 aa2.42□□□□□ -2.02
PABPC1-212ENST00000519622 EPPK1P58107 5090 aaKnown RBP2.41□□□□□ -2.02
PABPC1-212ENST00000519622 MYCBP2O75592 4640 aa2.41□□□□□ -2.02
PABPC1-212ENST00000519622 KRTAP10-8P60410 259 aa2.41□□□□□ -2.02
PABPC1-212ENST00000519622 LCA10Q71F78 164 aa2.41□□□□□ -2.02
PABPC1-212ENST00000519622 SPAG11AQ6PDA7 123 aa2.4□□□□□ -2.03
PABPC1-212ENST00000519622 BRK1Q8WUW1 75 aa2.4□□□□□ -2.03
PABPC1-212ENST00000519622 PRR15LQ9BU68 103 aa2.4□□□□□ -2.03
PABPC1-212ENST00000519622 MT1HL1P0DM35 61 aa2.39□□□□□ -2.03
PABPC1-212ENST00000519622 SPINK7P58062 85 aa2.39□□□□□ -2.03
PABPC1-212ENST00000519622 V9GYY9 64 aa2.39□□□□□ -2.03
PABPC1-212ENST00000519622 C9orf92A6NGG3 77 aa2.36□□□□□ -2.03
PABPC1-212ENST00000519622 ACYP2P14621 99 aa2.36□□□□□ -2.03
PABPC1-212ENST00000519622 C7orf65Q6ZTY9 151 aa2.36□□□□□ -2.03
PABPC1-212ENST00000519622 A6NN06 94 aa2.35□□□□□ -2.03
PABPC1-212ENST00000519622 CHKB-CPT1BH3BT56 60 aa2.35□□□□□ -2.03
PABPC1-212ENST00000519622 CDC42SE1Q9NRR8 79 aa2.35□□□□□ -2.03
PABPC1-212ENST00000519622 ABCA13Q86UQ4 5058 aa2.34□□□□□ -2.03
PABPC1-212ENST00000519622 Q5VSD8 79 aa2.34□□□□□ -2.03
PABPC1-212ENST00000519622 HERC2O95714 4834 aa2.33□□□□□ -2.04
PABPC1-212ENST00000519622 OBSCNQ5VST9 7968 aa2.31□□□□□ -2.04
PABPC1-212ENST00000519622 A6NED7 52 aa2.31□□□□□ -2.04
PABPC1-212ENST00000519622 RPL37P61927 97 aaKnown RBP2.31□□□□□ -2.04
PABPC1-212ENST00000519622 SPATA8Q6RVD6 105 aa2.31□□□□□ -2.04
PABPC1-212ENST00000519622 MUC17Q685J3 4493 aa2.3□□□□□ -2.04
PABPC1-212ENST00000519622 LCE3EQ5T5B0 92 aa2.3□□□□□ -2.04
PABPC1-212ENST00000519622 BIRC6Q9NR09 4857 aa2.3□□□□□ -2.04
PABPC1-212ENST00000519622 COX6B2Q6YFQ2 88 aa2.29□□□□□ -2.04
PABPC1-212ENST00000519622 ATP11AUNQ6ZP68 121 aa2.29□□□□□ -2.04
PABPC1-212ENST00000519622 LRP2P98164 4655 aa2.29□□□□□ -2.04
PABPC1-212ENST00000519622 H0YAA0 97 aa2.28□□□□□ -2.04
PABPC1-212ENST00000519622 KRTAP4-3Q9BYR4 195 aa2.28□□□□□ -2.04
PABPC1-212ENST00000519622 LPAP08519 4548 aa2.28□□□□□ -2.04
PABPC1-212ENST00000519622 A0A1B0GU69 56 aa2.27□□□□□ -2.05
PABPC1-212ENST00000519622 PMAIP1Q13794 54 aa2.25□□□□□ -2.05
PABPC1-212ENST00000519622 KRTAP19-2Q3LHN2 52 aa2.25□□□□□ -2.05
PABPC1-212ENST00000519622 KTN1-AS1Q86SY8 53 aa2.25□□□□□ -2.05
PABPC1-212ENST00000519622 MIR22HGQ0VDD5 57 aa2.24□□□□□ -2.05
PABPC1-212ENST00000519622 KRTAP13-4Q3LI77 160 aa2.24□□□□□ -2.05
PABPC1-212ENST00000519622 SPTSSBQ8NFR3 76 aa2.24□□□□□ -2.05
PABPC1-212ENST00000519622 DMBT1Q9UGM3 2413 aaPredicted RBP2.23□□□□□ -2.05
PABPC1-212ENST00000519622 TPRXLQ17RH7 258 aa2.23□□□□□ -2.05
PABPC1-212ENST00000519622 H1FX-AS1Q4G0G2 97 aa2.23□□□□□ -2.05
PABPC1-212ENST00000519622 ADM2Q7Z4H4 148 aa2.23□□□□□ -2.05
PABPC1-212ENST00000519622 KRTAP4-1Q9BYQ7 146 aa2.23□□□□□ -2.05
PABPC1-212ENST00000519622 UQCR11O14957 56 aa2.22□□□□□ -2.05
PABPC1-212ENST00000519622 KRTAP12-2P59991 146 aa2.22□□□□□ -2.05
PABPC1-212ENST00000519622 LCE3AQ5TA76 89 aa2.22□□□□□ -2.05
PABPC1-212ENST00000519622 PCLOQ9Y6V0 5065 aa2.2□□□□□ -2.06
PABPC1-212ENST00000519622 HMCN2Q8NDA2 5059 aa2.19□□□□□ -2.06
PABPC1-212ENST00000519622 A0A1B0GU33 70 aa2.19□□□□□ -2.06
PABPC1-212ENST00000519622 P0C880 135 aa2.19□□□□□ -2.06
PABPC1-212ENST00000519622 HERC1Q15751 4861 aa2.19□□□□□ -2.06
PABPC1-212ENST00000519622 FLGP20930 4061 aaPredicted RBP2.19□□□□□ -2.06
PABPC1-212ENST00000519622 RBM12B-AS1Q9P1G2 102 aa2.18□□□□□ -2.06
PABPC1-212ENST00000519622 S4R3F8 94 aa2.17□□□□□ -2.06
PABPC1-212ENST00000519622 KRTAP5-2Q701N4 177 aa2.14□□□□□ -2.07
PABPC1-212ENST00000519622 SEC61GP60059 68 aa2.13□□□□□ -2.07
PABPC1-212ENST00000519622 KRTAP12-1P59990 96 aa2.12□□□□□ -2.07
PABPC1-212ENST00000519622 CSAG1Q6PB30 78 aa2.11□□□□□ -2.07
PABPC1-212ENST00000519622 RNF213Q63HN8 5207 aa2.1□□□□□ -2.07
PABPC1-212ENST00000519622 KRTAP25-1Q3LHN0 102 aa2.08□□□□□ -2.08
PABPC1-212ENST00000519622 A0A0D9SG42 100 aa2.07□□□□□ -2.08
PABPC1-212ENST00000519622 KRTAP5-5Q701N2 237 aaPredicted RBP2.07□□□□□ -2.08
PABPC1-212ENST00000519622 ROMO1P60602 79 aa2.05□□□□□ -2.08
PABPC1-212ENST00000519622 LINC01554Q52M75 96 aa2.05□□□□□ -2.08
PABPC1-212ENST00000519622 MUC2Q02817 5179 aa2.04□□□□□ -2.08
PABPC1-212ENST00000519622 M0QZ58 72 aa2.04□□□□□ -2.08
PABPC1-212ENST00000519622 CRIPTQ9P021 101 aa2.03□□□□□ -2.08
PABPC1-212ENST00000519622 UBR4Q5T4S7 5183 aa2.03□□□□□ -2.09
PABPC1-212ENST00000519622 C10orf95Q9H7T3 257 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms