RNA–Protein interactions for RNA: ENST00000519339.5

TNIP1-206, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 1 (best)

Gene TNIP1, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-206ENST00000519339 HERC1Q15751 4861 aa8.01□□□□□ -1.13
TNIP1-206ENST00000519339 CDC42SE1Q9NRR8 79 aa7.98□□□□□ -1.13
TNIP1-206ENST00000519339 LCA10Q71F78 164 aa7.94□□□□□ -1.14
TNIP1-206ENST00000519339 SEC61GP60059 68 aa7.91□□□□□ -1.14
TNIP1-206ENST00000519339 LPAP08519 4548 aa7.91□□□□□ -1.14
TNIP1-206ENST00000519339 A8MU10 97 aa7.89□□□□□ -1.15
TNIP1-206ENST00000519339 UQCR11O14957 56 aa7.87□□□□□ -1.15
TNIP1-206ENST00000519339 SPATA8Q6RVD6 105 aa7.83□□□□□ -1.16
TNIP1-206ENST00000519339 PMAIP1Q13794 54 aa7.82□□□□□ -1.16
TNIP1-206ENST00000519339 LRP2P98164 4655 aa7.82□□□□□ -1.16
TNIP1-206ENST00000519339 HMCN2Q8NDA2 5059 aa7.82□□□□□ -1.16
TNIP1-206ENST00000519339 MIR22HGQ0VDD5 57 aa7.78□□□□□ -1.16
TNIP1-206ENST00000519339 H1FX-AS1Q4G0G2 97 aa7.75□□□□□ -1.17
TNIP1-206ENST00000519339 SEC61BP60468 96 aaKnown RBP7.75□□□□□ -1.17
TNIP1-206ENST00000519339 KRTAP3-3Q9BYR6 98 aa7.75□□□□□ -1.17
TNIP1-206ENST00000519339 S4R3F8 94 aa7.75□□□□□ -1.17
TNIP1-206ENST00000519339 RBM12B-AS1Q9P1G2 102 aa7.74□□□□□ -1.17
TNIP1-206ENST00000519339 A0A1B0GU33 70 aa7.68□□□□□ -1.18
TNIP1-206ENST00000519339 A6NN06 94 aa7.68□□□□□ -1.18
TNIP1-206ENST00000519339 KTN1-AS1Q86SY8 53 aa7.62□□□□□ -1.19
TNIP1-206ENST00000519339 MUC17Q685J3 4493 aa7.61□□□□□ -1.19
TNIP1-206ENST00000519339 H0YAA0 97 aa7.59□□□□□ -1.19
TNIP1-206ENST00000519339 KRTAP10-6P60371 365 aaPredicted RBP7.58□□□□□ -1.2
TNIP1-206ENST00000519339 CSAG1Q6PB30 78 aa7.57□□□□□ -1.2
TNIP1-206ENST00000519339 KRTAP3-2Q9BYR7 98 aa7.55□□□□□ -1.2
TNIP1-206ENST00000519339 UBR4Q5T4S7 5183 aa7.54□□□□□ -1.2
TNIP1-206ENST00000519339 MUC2Q02817 5179 aa7.5□□□□□ -1.21
TNIP1-206ENST00000519339 KRTAP4-1Q9BYQ7 146 aa7.49□□□□□ -1.21
TNIP1-206ENST00000519339 ADM2Q7Z4H4 148 aa7.43□□□□□ -1.22
TNIP1-206ENST00000519339 P0C880 135 aa7.42□□□□□ -1.22
TNIP1-206ENST00000519339 RNF213Q63HN8 5207 aa7.4□□□□□ -1.23
TNIP1-206ENST00000519339 K7ERS5 55 aa7.4□□□□□ -1.23
TNIP1-206ENST00000519339 KRTAP19-2Q3LHN2 52 aa7.4□□□□□ -1.23
TNIP1-206ENST00000519339 KRTAP13-4Q3LI77 160 aa7.37□□□□□ -1.23
TNIP1-206ENST00000519339 M0QZ58 72 aa7.36□□□□□ -1.23
TNIP1-206ENST00000519339 FLGP20930 4061 aaPredicted RBP7.27□□□□□ -1.25
TNIP1-206ENST00000519339 PRAC1Q96KF2 57 aa7.27□□□□□ -1.25
TNIP1-206ENST00000519339 A0A0D9SG42 100 aa7.23□□□□□ -1.25
TNIP1-206ENST00000519339 FAT4Q6V0I7 4981 aa7.2□□□□□ -1.26
TNIP1-206ENST00000519339 R4GN34 69 aa7.17□□□□□ -1.26
TNIP1-206ENST00000519339 LCE2CQ5TA81 110 aa7.15□□□□□ -1.26
TNIP1-206ENST00000519339 KRTAP12-1P59990 96 aa7.14□□□□□ -1.27
TNIP1-206ENST00000519339 KRTAP12-2P59991 146 aa7.12□□□□□ -1.27
TNIP1-206ENST00000519339 ROMO1P60602 79 aa7.12□□□□□ -1.27
TNIP1-206ENST00000519339 SPINT4Q6UDR6 99 aa7.07□□□□□ -1.28
TNIP1-206ENST00000519339 CRIPTQ9P021 101 aa7.06□□□□□ -1.28
TNIP1-206ENST00000519339 LORP23490 312 aaPredicted RBP7.04□□□□□ -1.28
TNIP1-206ENST00000519339 LINC01554Q52M75 96 aa7.01□□□□□ -1.29
TNIP1-206ENST00000519339 MT1HP80294 61 aa6.99□□□□□ -1.29
TNIP1-206ENST00000519339 KRTAP25-1Q3LHN0 102 aa6.99□□□□□ -1.29
TNIP1-206ENST00000519339 LCE2AQ5TA79 106 aaPredicted RBP6.88□□□□□ -1.31
TNIP1-206ENST00000519339 M0R2T5 61 aa6.84□□□□□ -1.31
TNIP1-206ENST00000519339 SPRR2GQ9BYE4 73 aa6.79□□□□□ -1.32
TNIP1-206ENST00000519339 CAMK2N1Q7Z7J9 78 aa6.73□□□□□ -1.33
TNIP1-206ENST00000519339 C10orf95Q9H7T3 257 aa6.73□□□□□ -1.33
TNIP1-206ENST00000519339 KRTAP9-8Q9BYQ0 159 aa6.72□□□□□ -1.33
TNIP1-206ENST00000519339 MT2AP02795 61 aa6.7□□□□□ -1.34
TNIP1-206ENST00000519339 KRTAP19-1Q8IUB9 90 aa6.7□□□□□ -1.34
TNIP1-206ENST00000519339 MT1FP04733 61 aa6.66□□□□□ -1.34
TNIP1-206ENST00000519339 KRTAP10-10P60014 251 aa6.65□□□□□ -1.34
TNIP1-206ENST00000519339 PLAC4Q8WY50 150 aa6.62□□□□□ -1.35
TNIP1-206ENST00000519339 KRTAP19-8Q3LI54 63 aa6.56□□□□□ -1.36
TNIP1-206ENST00000519339 PP632Q6XCG6 107 aa6.55□□□□□ -1.36
TNIP1-206ENST00000519339 TNP1P09430 55 aa6.5□□□□□ -1.37
TNIP1-206ENST00000519339 KRTAP23-1A1A580 65 aa6.5□□□□□ -1.37
TNIP1-206ENST00000519339 KRTAP9-3Q9BYQ3 159 aa6.48□□□□□ -1.37
TNIP1-206ENST00000519339 MT1BP07438 61 aa6.4□□□□□ -1.38
TNIP1-206ENST00000519339 LCE2BO14633 110 aa6.36□□□□□ -1.39
TNIP1-206ENST00000519339 KRTAP15-1Q3LI76 137 aa6.29□□□□□ -1.4
TNIP1-206ENST00000519339 KRTAP10-5P60370 271 aa6.27□□□□□ -1.41
TNIP1-206ENST00000519339 MT1XP80297 61 aa6.27□□□□□ -1.41
TNIP1-206ENST00000519339 LCE2DQ5TA82 110 aaPredicted RBP6.27□□□□□ -1.41
TNIP1-206ENST00000519339 USH2AO75445 5202 aa6.25□□□□□ -1.41
TNIP1-206ENST00000519339 PRO2289Q9P1D8 64 aa6.21□□□□□ -1.42
TNIP1-206ENST00000519339 H3BS24 57 aa6.19□□□□□ -1.42
TNIP1-206ENST00000519339 FSIP2Q5CZC0 6907 aa6.19□□□□□ -1.42
TNIP1-206ENST00000519339 KRTAP9-2Q9BYQ4 174 aa6.18□□□□□ -1.42
TNIP1-206ENST00000519339 SSPOA2VEC9 5147 aa6.12□□□□□ -1.43
TNIP1-206ENST00000519339 LCE3AQ5TA76 89 aa6.11□□□□□ -1.43
TNIP1-206ENST00000519339 KRTAP8-1Q8IUC2 63 aa6.08□□□□□ -1.44
TNIP1-206ENST00000519339 KRTAP10-12P60413 245 aa6.06□□□□□ -1.44
TNIP1-206ENST00000519339 NDUFAF8A1L188 74 aa6.04□□□□□ -1.44
TNIP1-206ENST00000519339 KRTAP10-7P60409 375 aaPredicted RBP6.01□□□□□ -1.45
TNIP1-206ENST00000519339 KRTAP19-6Q3LI70 58 aa5.96□□□□□ -1.46
TNIP1-206ENST00000519339 SPRR5A0A1B0GTR4 108 aa5.92□□□□□ -1.46
TNIP1-206ENST00000519339 CRCT1Q9UGL9 99 aa5.9□□□□□ -1.47
TNIP1-206ENST00000519339 KRTAP12-3P60328 96 aa5.89□□□□□ -1.47
TNIP1-206ENST00000519339 LUZP6Q538Z0 58 aa5.89□□□□□ -1.47
TNIP1-206ENST00000519339 FCGBPQ9Y6R7 5405 aaPredicted RBP5.87□□□□□ -1.47
TNIP1-206ENST00000519339 KRTAP9-6A0A140TA67 174 aa5.74□□□□□ -1.49
TNIP1-206ENST00000519339 KRTAP19-5Q3LI72 72 aa5.71□□□□□ -1.49
TNIP1-206ENST00000519339 KMT2DO14686 5537 aa5.68□□□□□ -1.5
TNIP1-206ENST00000519339 KRTAP4-8A0A0G2JLE6 195 aa5.67□□□□□ -1.5
TNIP1-206ENST00000519339 KRTAP4-8Q9BYQ9 185 aa5.67□□□□□ -1.5
TNIP1-206ENST00000519339 KRTAP19-4Q3LI73 84 aa5.63□□□□□ -1.51
TNIP1-206ENST00000519339 MACF1Q9UPN3 7388 aaKnown RBP5.61□□□□□ -1.51
TNIP1-206ENST00000519339 KRTAP19-7Q3SYF9 63 aa5.6□□□□□ -1.51
TNIP1-206ENST00000519339 LCE3CQ5T5A8 94 aa5.53□□□□□ -1.52
TNIP1-206ENST00000519339 SYNE2Q8WXH0 6885 aaKnown RBP5.49□□□□□ -1.53
TNIP1-206ENST00000519339 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms