RNA–Protein interactions for RNA: ENST00000519339.5

TNIP1-206, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 1 (best)

Gene TNIP1, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-206ENST00000519339 NISCHQ9Y2I1 1504 aa33.71■■■□□ 2.99
TNIP1-206ENST00000519339 CCDC180Q9P1Z9 1646 aa29.32■■■□□ 2.28
TNIP1-206ENST00000519339 ZCCHC6Q5VYS8 1495 aaKnown RBP28.42■■■□□ 2.14
TNIP1-206ENST00000519339 ABCC9O60706 1549 aa28.11■■■□□ 2.09
TNIP1-206ENST00000519339 DCAF1Q9Y4B6 1507 aa27.97■■■□□ 2.07
TNIP1-206ENST00000519339 DCAF8L2P0C7V8 631 aa27.7■■■□□ 2.02
TNIP1-206ENST00000519339 SHROOM4Q9ULL8 1493 aa27.63■■■□□ 2.01
TNIP1-206ENST00000519339 MYO15BQ96JP2 1530 aa27.51■■□□□ 1.99
TNIP1-206ENST00000519339 NACADO15069 1562 aa27.38■■□□□ 1.97
TNIP1-206ENST00000519339 RB1CC1Q8TDY2 1594 aa27.24■■□□□ 1.95
TNIP1-206ENST00000519339 SCRIBQ14160 1630 aa26.94■■□□□ 1.9
TNIP1-206ENST00000519339 SUPT5HO00267 1087 aaKnown RBP26.86■■□□□ 1.89
TNIP1-206ENST00000519339 UNC13AQ9UPW8 1703 aa26.79■■□□□ 1.88
TNIP1-206ENST00000519339 BICRAQ9NZM4 1560 aa26.52■■□□□ 1.84
TNIP1-206ENST00000519339 PABPN1Q86U42 306 aaKnown RBP eCLIP26.44■■□□□ 1.82
TNIP1-206ENST00000519339 RSF1Q96T23 1441 aaPredicted RBP26.32■■□□□ 1.8
TNIP1-206ENST00000519339 CECR2Q9BXF3 1484 aa26.08■■□□□ 1.77
TNIP1-206ENST00000519339 CHIC1Q5VXU3 224 aa26.04■■□□□ 1.76
TNIP1-206ENST00000519339 BAZ1AQ9NRL2 1556 aaPredicted RBP26■■□□□ 1.75
TNIP1-206ENST00000519339 MROH2BQ7Z745 1585 aa26■■□□□ 1.75
TNIP1-206ENST00000519339 SMARCA4P51532 1647 aa25.8■■□□□ 1.72
TNIP1-206ENST00000519339 WIZO95785 1651 aa25.78■■□□□ 1.72
TNIP1-206ENST00000519339 EIF4G1Q04637 1599 aaKnown RBP25.72■■□□□ 1.71
TNIP1-206ENST00000519339 TOP2AP11388 1531 aaKnown RBP25.61■■□□□ 1.69
TNIP1-206ENST00000519339 PEG3Q9GZU2 1588 aa25.54■■□□□ 1.68
TNIP1-206ENST00000519339 ATAD2BQ9ULI0 1458 aa25.47■■□□□ 1.67
TNIP1-206ENST00000519339 CC2D2AQ9P2K1 1620 aa25.44■■□□□ 1.66
TNIP1-206ENST00000519339 SMARCA2P51531 1590 aa25.39■■□□□ 1.66
TNIP1-206ENST00000519339 CCDC88BA6NC98 1476 aa25.33■■□□□ 1.65
TNIP1-206ENST00000519339 NCAPD3P42695 1498 aa25.3■■□□□ 1.64
TNIP1-206ENST00000519339 TRIM41Q8WV44 630 aa25.3■■□□□ 1.64
TNIP1-206ENST00000519339 BAZ1BQ9UIG0 1483 aaKnown RBP25.27■■□□□ 1.64
TNIP1-206ENST00000519339 DNAJC5BQ9UF47 199 aa25.24■■□□□ 1.63
TNIP1-206ENST00000519339 HMGXB3Q12766 1538 aa25.22■■□□□ 1.63
TNIP1-206ENST00000519339 LOC105371045A0A1W2PR82 267 aa24.97■■□□□ 1.59
TNIP1-206ENST00000519339 ABCC8Q09428 1581 aa24.86■■□□□ 1.57
TNIP1-206ENST00000519339 WRNQ14191 1432 aaPredicted RBP eCLIP24.75■■□□□ 1.55
TNIP1-206ENST00000519339 EEA1Q15075 1411 aa24.73■■□□□ 1.55
TNIP1-206ENST00000519339 FAM9AQ8IZU1 332 aaPredicted RBP24.72■■□□□ 1.55
TNIP1-206ENST00000519339 CFTRP13569 1480 aa24.64■■□□□ 1.53
TNIP1-206ENST00000519339 CADPSQ9ULU8 1353 aa24.62■■□□□ 1.53
TNIP1-206ENST00000519339 NESP48681 1621 aa24.6■■□□□ 1.53
TNIP1-206ENST00000519339 SYNJ1O43426 1573 aa24.57■■□□□ 1.52
TNIP1-206ENST00000519339 SOGA1O94964 1423 aa24.53■■□□□ 1.52
TNIP1-206ENST00000519339 TOP2BQ02880 1626 aa24.51■■□□□ 1.51
TNIP1-206ENST00000519339 LAMC3Q9Y6N6 1575 aa24.49■■□□□ 1.51
TNIP1-206ENST00000519339 PRDM2Q13029 1718 aa24.49■■□□□ 1.51
TNIP1-206ENST00000519339 CSRNP3Q8WYN3 585 aa24.47■■□□□ 1.51
TNIP1-206ENST00000519339 BIVM-ERCC5R4GMW8 1640 aa24.46■■□□□ 1.51
TNIP1-206ENST00000519339 RUSC2Q8N2Y8 1516 aa24.38■■□□□ 1.49
TNIP1-206ENST00000519339 TNIKQ9UKE5 1360 aa24.38■■□□□ 1.49
TNIP1-206ENST00000519339 FANCD2Q9BXW9 1451 aa24.35■■□□□ 1.49
TNIP1-206ENST00000519339 PCGF6Q9BYE7 350 aa24.33■■□□□ 1.49
TNIP1-206ENST00000519339 GOLGA3Q08378 1498 aa24.33■■□□□ 1.49
TNIP1-206ENST00000519339 TRIM26Q12899 539 aaPredicted RBP24.33■■□□□ 1.48
TNIP1-206ENST00000519339 KIF21BO75037 1637 aa24.31■■□□□ 1.48
TNIP1-206ENST00000519339 CEP164Q9UPV0 1460 aa24.31■■□□□ 1.48
TNIP1-206ENST00000519339 KIF21AQ7Z4S6 1674 aa24.29■■□□□ 1.48
TNIP1-206ENST00000519339 CUX1P39880 1505 aa24.29■■□□□ 1.48
TNIP1-206ENST00000519339 PDS5BQ9NTI5 1447 aa24.28■■□□□ 1.48
TNIP1-206ENST00000519339 EHMT2Q96KQ7 1210 aa24.26■■□□□ 1.47
TNIP1-206ENST00000519339 CEP162Q5TB80 1403 aa24.22■■□□□ 1.47
TNIP1-206ENST00000519339 UBTFP17480 764 aaKnown RBP24.13■■□□□ 1.45
TNIP1-206ENST00000519339 KIF27Q86VH2 1401 aa24.11■■□□□ 1.45
TNIP1-206ENST00000519339 URB2Q14146 1524 aaKnown RBP24.11■■□□□ 1.45
TNIP1-206ENST00000519339 ERICH3Q5RHP9 1530 aa24.1■■□□□ 1.45
TNIP1-206ENST00000519339 ERCC6Q03468 1493 aa24.08■■□□□ 1.45
TNIP1-206ENST00000519339 HRCP23327 699 aa24.08■■□□□ 1.45
TNIP1-206ENST00000519339 PRXQ9BXM0 1461 aa24.07■■□□□ 1.44
TNIP1-206ENST00000519339 TOPBP1Q92547 1522 aa24.05■■□□□ 1.44
TNIP1-206ENST00000519339 DNMBPQ6XZF7 1577 aa24.05■■□□□ 1.44
TNIP1-206ENST00000519339 RAPGEF2Q9Y4G8 1499 aa24.04■■□□□ 1.44
TNIP1-206ENST00000519339 MRC2Q9UBG0 1479 aa24.02■■□□□ 1.44
TNIP1-206ENST00000519339 THOC2Q8NI27 1593 aaKnown RBP23.99■■□□□ 1.43
TNIP1-206ENST00000519339 FGD5Q6ZNL6 1462 aa23.96■■□□□ 1.43
TNIP1-206ENST00000519339 WDR62O43379 1518 aa23.94■■□□□ 1.42
TNIP1-206ENST00000519339 CLIP1P30622 1438 aa23.93■■□□□ 1.42
TNIP1-206ENST00000519339 POLA1P09884 1462 aaPredicted RBP23.91■■□□□ 1.42
TNIP1-206ENST00000519339 CUX2O14529 1486 aa23.88■■□□□ 1.41
TNIP1-206ENST00000519339 RAD54L2Q9Y4B4 1467 aa23.85■■□□□ 1.41
TNIP1-206ENST00000519339 IGF1RP08069 1367 aa23.84■■□□□ 1.41
TNIP1-206ENST00000519339 VPS8Q8N3P4 1428 aa23.82■■□□□ 1.4
TNIP1-206ENST00000519339 ABCA10Q8WWZ4 1543 aa23.82■■□□□ 1.4
TNIP1-206ENST00000519339 TARBP1Q13395 1621 aaKnown RBP23.76■■□□□ 1.39
TNIP1-206ENST00000519339 WDR97A6NE52 1622 aa23.73■■□□□ 1.39
TNIP1-206ENST00000519339 CARMIL1Q5VZK9 1371 aa23.72■■□□□ 1.39
TNIP1-206ENST00000519339 ZEB1P37275 1124 aaPredicted RBP23.67■■□□□ 1.38
TNIP1-206ENST00000519339 PPARGC1BQ86YN6 1023 aaKnown RBP23.66■■□□□ 1.38
TNIP1-206ENST00000519339 IFT140Q96RY7 1462 aa23.65■■□□□ 1.38
TNIP1-206ENST00000519339 TDRD9Q8NDG6 1382 aaKnown RBP23.64■■□□□ 1.37
TNIP1-206ENST00000519339 ARAP1Q96P48 1450 aa23.62■■□□□ 1.37
TNIP1-206ENST00000519339 CUL7Q14999 1698 aa23.62■■□□□ 1.37
TNIP1-206ENST00000519339 ZNF608Q9ULD9 1512 aaPredicted RBP23.62■■□□□ 1.37
TNIP1-206ENST00000519339 ABCA5Q8WWZ7 1642 aa23.6■■□□□ 1.37
TNIP1-206ENST00000519339 APLP2Q06481 763 aa23.57■■□□□ 1.36
TNIP1-206ENST00000519339 AQRO60306 1485 aaKnown RBP eCLIP23.56■■□□□ 1.361e-6■■■■□ 26.5
TNIP1-206ENST00000519339 ARHGAP35Q9NRY4 1499 aa23.55■■□□□ 1.36
TNIP1-206ENST00000519339 GAPVD1Q14C86 1478 aa23.53■■□□□ 1.36
TNIP1-206ENST00000519339 EIF4G3O43432 1585 aaKnown RBP23.5■■□□□ 1.35
TNIP1-206ENST00000519339 RANGAP1P46060 587 aaPredicted RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 534.4 ms