RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 KRTAP9-3Q9BYQ3 159 aa1.05□□□□□ -2.24
RNU1-40P-201ENST00000516816 KRTAP10-6P60371 365 aaPredicted RBP1.04□□□□□ -2.24
RNU1-40P-201ENST00000516816 TPRXLQ17RH7 258 aa1.04□□□□□ -2.24
RNU1-40P-201ENST00000516816 PLAC4Q8WY50 150 aa1.04□□□□□ -2.24
RNU1-40P-201ENST00000516816 TRRAPQ9Y4A5 3859 aa1.04□□□□□ -2.24
RNU1-40P-201ENST00000516816 DMBT1Q9UGM3 2413 aaPredicted RBP1.04□□□□□ -2.24
RNU1-40P-201ENST00000516816 KRTAP4-2Q9BYR5 136 aa1.03□□□□□ -2.24
RNU1-40P-201ENST00000516816 PRO2289Q9P1D8 64 aa1.03□□□□□ -2.24
RNU1-40P-201ENST00000516816 HUWE1Q7Z6Z7 4374 aaKnown RBP1.03□□□□□ -2.24
RNU1-40P-201ENST00000516816 FLG2Q5D862 2391 aaPredicted RBP1.03□□□□□ -2.25
RNU1-40P-201ENST00000516816 FBN3Q75N90 2809 aa1.02□□□□□ -2.25
RNU1-40P-201ENST00000516816 KRTAP12-1P59990 96 aa1.02□□□□□ -2.25
RNU1-40P-201ENST00000516816 KRTAP10-4P60372 401 aaPredicted RBP1.02□□□□□ -2.25
RNU1-40P-201ENST00000516816 LCE5AQ5TCM9 118 aa1.02□□□□□ -2.25
RNU1-40P-201ENST00000516816 KRTAP4-11Q9BYQ6 195 aa1.02□□□□□ -2.25
RNU1-40P-201ENST00000516816 MEGF8Q7Z7M0 2845 aa1.02□□□□□ -2.25
RNU1-40P-201ENST00000516816 COL7A1Q02388 2944 aa1.01□□□□□ -2.25
RNU1-40P-201ENST00000516816 DNAH3Q8TD57 4116 aa1.01□□□□□ -2.25
RNU1-40P-201ENST00000516816 TNP1P09430 55 aa1.01□□□□□ -2.25
RNU1-40P-201ENST00000516816 KRTAP12-2P59991 146 aa1.01□□□□□ -2.25
RNU1-40P-201ENST00000516816 DNAH9Q9NYC9 4486 aa1□□□□□ -2.25
RNU1-40P-201ENST00000516816 INE1O15225 51 aa0.99□□□□□ -2.25
RNU1-40P-201ENST00000516816 KRTAP13-4Q3LI77 160 aa0.99□□□□□ -2.25
RNU1-40P-201ENST00000516816 KRTAP4-5Q9BYR2 181 aa0.99□□□□□ -2.25
RNU1-40P-201ENST00000516816 C10orf95Q9H7T3 257 aa0.99□□□□□ -2.25
RNU1-40P-201ENST00000516816 DNAH1Q9P2D7 4330 aa0.99□□□□□ -2.25
RNU1-40P-201ENST00000516816 ANK2Q01484 3957 aa0.98□□□□□ -2.25
RNU1-40P-201ENST00000516816 CMYA5Q8N3K9 4069 aa0.98□□□□□ -2.25
RNU1-40P-201ENST00000516816 DYNC2H1Q8NCM8 4307 aaKnown RBP0.97□□□□□ -2.25
RNU1-40P-201ENST00000516816 DNAH10Q8IVF4 4471 aa0.96□□□□□ -2.26
RNU1-40P-201ENST00000516816 VPS13DQ5THJ4 4388 aa0.96□□□□□ -2.26
RNU1-40P-201ENST00000516816 M0R2T5 61 aa0.96□□□□□ -2.26
RNU1-40P-201ENST00000516816 MT1HL1P0DM35 61 aa0.96□□□□□ -2.26
RNU1-40P-201ENST00000516816 DNAH7Q8WXX0 4024 aa0.96□□□□□ -2.26
RNU1-40P-201ENST00000516816 DNAH8Q96JB1 4490 aa0.95□□□□□ -2.26
RNU1-40P-201ENST00000516816 DNAH17Q9UFH2 4485 aa0.95□□□□□ -2.26
RNU1-40P-201ENST00000516816 CSMD3Q7Z407 3707 aa0.95□□□□□ -2.26
RNU1-40P-201ENST00000516816 KRTAP17-1Q9BYP8 105 aa0.95□□□□□ -2.26
RNU1-40P-201ENST00000516816 PRKDCP78527 4128 aaKnown RBP0.94□□□□□ -2.26
RNU1-40P-201ENST00000516816 DNAH2Q9P225 4427 aa0.94□□□□□ -2.26
RNU1-40P-201ENST00000516816 HECTD4Q9Y4D8 3996 aa0.94□□□□□ -2.26
RNU1-40P-201ENST00000516816 DNAH11Q96DT5 4516 aa0.94□□□□□ -2.26
RNU1-40P-201ENST00000516816 PLECQ15149 4684 aaKnown RBP0.94□□□□□ -2.26
RNU1-40P-201ENST00000516816 LYSTQ99698 3801 aa0.93□□□□□ -2.26
RNU1-40P-201ENST00000516816 KMT2AQ03164 3969 aa0.93□□□□□ -2.26
RNU1-40P-201ENST00000516816 DNAH6Q9C0G6 4158 aa0.93□□□□□ -2.26
RNU1-40P-201ENST00000516816 FRAS1Q86XX4 4008 aa0.92□□□□□ -2.26
RNU1-40P-201ENST00000516816 VPS13BQ7Z7G8 4022 aa0.91□□□□□ -2.26
RNU1-40P-201ENST00000516816 PKD1P98161 4303 aa0.91□□□□□ -2.26
RNU1-40P-201ENST00000516816 STARD9Q9P2P6 4700 aa0.91□□□□□ -2.26
RNU1-40P-201ENST00000516816 KRTAP10-10P60014 251 aa0.9□□□□□ -2.27
RNU1-40P-201ENST00000516816 FAT2Q9NYQ8 4349 aa0.89□□□□□ -2.27
RNU1-40P-201ENST00000516816 SACSQ9NZJ4 4579 aa0.88□□□□□ -2.27
RNU1-40P-201ENST00000516816 LRP1BQ9NZR2 4599 aa0.88□□□□□ -2.27
RNU1-40P-201ENST00000516816 LCE1AQ5T7P2 110 aa0.88□□□□□ -2.27
RNU1-40P-201ENST00000516816 KRTAP5-3Q6L8H2 238 aa0.88□□□□□ -2.27
RNU1-40P-201ENST00000516816 SPRR2GQ9BYE4 73 aa0.88□□□□□ -2.27
RNU1-40P-201ENST00000516816 DNAH5Q8TE73 4624 aa0.88□□□□□ -2.27
RNU1-40P-201ENST00000516816 KRTAP9-8Q9BYQ0 159 aa0.87□□□□□ -2.27
RNU1-40P-201ENST00000516816 PKHD1P08F94 4074 aa0.86□□□□□ -2.27
RNU1-40P-201ENST00000516816 SPRR5A0A1B0GTR4 108 aa0.86□□□□□ -2.27
RNU1-40P-201ENST00000516816 KRTAP4-1Q9BYQ7 146 aa0.86□□□□□ -2.27
RNU1-40P-201ENST00000516816 PKHD1L1Q86WI1 4243 aa0.85□□□□□ -2.27
RNU1-40P-201ENST00000516816 HYDINQ4G0P3 5121 aa0.85□□□□□ -2.27
RNU1-40P-201ENST00000516816 KRTAP12-3P60328 96 aa0.84□□□□□ -2.27
RNU1-40P-201ENST00000516816 KRTAP8-1Q8IUC2 63 aa0.84□□□□□ -2.27
RNU1-40P-201ENST00000516816 FAT3Q8TDW7 4589 aa0.84□□□□□ -2.28
RNU1-40P-201ENST00000516816 APOBP04114 4563 aaKnown RBP0.84□□□□□ -2.28
RNU1-40P-201ENST00000516816 DYNC1H1Q14204 4646 aaKnown RBP0.84□□□□□ -2.28
RNU1-40P-201ENST00000516816 FAT1Q14517 4588 aa0.83□□□□□ -2.28
RNU1-40P-201ENST00000516816 KRTAP10-12P60413 245 aa0.83□□□□□ -2.28
RNU1-40P-201ENST00000516816 KRTAP19-2Q3LHN2 52 aa0.83□□□□□ -2.28
RNU1-40P-201ENST00000516816 LCE3AQ5TA76 89 aa0.83□□□□□ -2.28
RNU1-40P-201ENST00000516816 LRP1Q07954 4544 aaKnown RBP0.82□□□□□ -2.28
RNU1-40P-201ENST00000516816 KRTAP19-8Q3LI54 63 aa0.82□□□□□ -2.28
RNU1-40P-201ENST00000516816 TNXBP22105 4242 aa0.82□□□□□ -2.28
RNU1-40P-201ENST00000516816 MT1HP80294 61 aa0.81□□□□□ -2.28
RNU1-40P-201ENST00000516816 MT2AP02795 61 aa0.8□□□□□ -2.28
RNU1-40P-201ENST00000516816 LCE3CQ5T5A8 94 aa0.8□□□□□ -2.28
RNU1-40P-201ENST00000516816 HSPG2P98160 4391 aa0.8□□□□□ -2.28
RNU1-40P-201ENST00000516816 DNHD1Q96M86 4753 aa0.79□□□□□ -2.28
RNU1-40P-201ENST00000516816 MT1FP04733 61 aa0.78□□□□□ -2.28
RNU1-40P-201ENST00000516816 KRTAP10-5P60370 271 aa0.78□□□□□ -2.28
RNU1-40P-201ENST00000516816 LRP2P98164 4655 aa0.78□□□□□ -2.28
RNU1-40P-201ENST00000516816 MT1XP80297 61 aa0.77□□□□□ -2.29
RNU1-40P-201ENST00000516816 LCE1EQ5T753 118 aa0.77□□□□□ -2.29
RNU1-40P-201ENST00000516816 KRTAP2-2Q9BYT5 123 aa0.77□□□□□ -2.29
RNU1-40P-201ENST00000516816 MUC17Q685J3 4493 aa0.77□□□□□ -2.29
RNU1-40P-201ENST00000516816 MYCBP2O75592 4640 aa0.77□□□□□ -2.29
RNU1-40P-201ENST00000516816 MT1BP07438 61 aa0.76□□□□□ -2.29
RNU1-40P-201ENST00000516816 LPAP08519 4548 aa0.75□□□□□ -2.29
RNU1-40P-201ENST00000516816 RYR1P21817 5038 aa0.75□□□□□ -2.29
RNU1-40P-201ENST00000516816 RYR2Q92736 4967 aa0.75□□□□□ -2.29
RNU1-40P-201ENST00000516816 KRTAP19-5Q3LI72 72 aa0.75□□□□□ -2.29
RNU1-40P-201ENST00000516816 FLGP20930 4061 aaPredicted RBP0.74□□□□□ -2.29
RNU1-40P-201ENST00000516816 KRTAP10-7P60409 375 aaPredicted RBP0.74□□□□□ -2.29
RNU1-40P-201ENST00000516816 KMT2CQ8NEZ4 4911 aaKnown RBP0.74□□□□□ -2.29
RNU1-40P-201ENST00000516816 KIAA1109Q2LD37 5005 aa0.72□□□□□ -2.29
RNU1-40P-201ENST00000516816 MT1EP04732 61 aa0.72□□□□□ -2.29
RNU1-40P-201ENST00000516816 MT1LQ93083 61 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms