RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 BRCA2P51587 3418 aa0.35□□□□□ -2.35
LDHBP3-201ENST00000514909 ABCA5Q8WWZ7 1642 aa0.35□□□□□ -2.35
LDHBP3-201ENST00000514909 FAT3Q8TDW7 4589 aa0.35□□□□□ -2.35
LDHBP3-201ENST00000514909 VPS13BQ7Z7G8 4022 aa0.35□□□□□ -2.35
LDHBP3-201ENST00000514909 MAP1AP78559 2803 aaPredicted RBP0.34□□□□□ -2.35
LDHBP3-201ENST00000514909 ABCC8Q09428 1581 aa0.34□□□□□ -2.36
LDHBP3-201ENST00000514909 FREM2Q5SZK8 3169 aa0.34□□□□□ -2.36
LDHBP3-201ENST00000514909 NBPF19A0A087WUL8 3843 aa0.33□□□□□ -2.36
LDHBP3-201ENST00000514909 NRXN3Q9Y4C0 1643 aa0.33□□□□□ -2.36
LDHBP3-201ENST00000514909 ASPMQ8IZT6 3477 aa0.33□□□□□ -2.36
LDHBP3-201ENST00000514909 CMC2Q9NRP2 79 aa0.32□□□□□ -2.36
LDHBP3-201ENST00000514909 DMXL2Q8TDJ6 3036 aa0.32□□□□□ -2.36
LDHBP3-201ENST00000514909 LOC400499M0QZD8 3231 aa0.31□□□□□ -2.36
LDHBP3-201ENST00000514909 LAMA1P25391 3075 aa0.3□□□□□ -2.36
LDHBP3-201ENST00000514909 USP34Q70CQ2 3546 aa0.3□□□□□ -2.36
LDHBP3-201ENST00000514909 LRP2P98164 4655 aa0.3□□□□□ -2.36
LDHBP3-201ENST00000514909 EFCAB6Q5THR3 1501 aa0.29□□□□□ -2.36
LDHBP3-201ENST00000514909 PKHD1P08F94 4074 aa0.29□□□□□ -2.36
LDHBP3-201ENST00000514909 SVEP1Q4LDE5 3571 aa0.29□□□□□ -2.36
LDHBP3-201ENST00000514909 TACC2O95359 2948 aa0.29□□□□□ -2.36
LDHBP3-201ENST00000514909 CFAP54Q96N23 3096 aa0.28□□□□□ -2.36
LDHBP3-201ENST00000514909 SRRM2Q9UQ35 2752 aaKnown RBP0.28□□□□□ -2.36
LDHBP3-201ENST00000514909 SPRR2AP35326 72 aa0.28□□□□□ -2.36
LDHBP3-201ENST00000514909 NF1P21359 2839 aa0.28□□□□□ -2.37
LDHBP3-201ENST00000514909 CUBNO60494 3623 aa0.27□□□□□ -2.37
LDHBP3-201ENST00000514909 H3BNG1 76 aa0.26□□□□□ -2.37
LDHBP3-201ENST00000514909 CSMD2Q7Z408 3487 aa0.26□□□□□ -2.37
LDHBP3-201ENST00000514909 WDFY3Q8IZQ1 3526 aa0.25□□□□□ -2.37
LDHBP3-201ENST00000514909 HTTP42858 3142 aa0.25□□□□□ -2.37
LDHBP3-201ENST00000514909 SNRPGP15A8MWD9 76 aa0.25□□□□□ -2.37
LDHBP3-201ENST00000514909 SPTBN5Q9NRC6 3674 aaKnown RBP0.25□□□□□ -2.37
LDHBP3-201ENST00000514909 UTRNP46939 3433 aa0.25□□□□□ -2.37
LDHBP3-201ENST00000514909 LMO7Q8WWI1 1683 aa0.24□□□□□ -2.37
LDHBP3-201ENST00000514909 MGAQ8IWI9 3026 aa0.24□□□□□ -2.37
LDHBP3-201ENST00000514909 CENPEQ02224 2701 aa0.24□□□□□ -2.37
LDHBP3-201ENST00000514909 FRYLO94915 3013 aa0.24□□□□□ -2.37
LDHBP3-201ENST00000514909 IGLV5-48A0A075B6I7 105 aa0.23□□□□□ -2.37
LDHBP3-201ENST00000514909 A0A1B0GUL6 1792 aa0.23□□□□□ -2.37
LDHBP3-201ENST00000514909 LAMA5O15230 3695 aa0.23□□□□□ -2.37
LDHBP3-201ENST00000514909 VPS13AQ96RL7 3174 aa0.22□□□□□ -2.37
LDHBP3-201ENST00000514909 KRTAP6-2Q3LI66 62 aa0.22□□□□□ -2.37
LDHBP3-201ENST00000514909 NOP10Q9NPE3 64 aaKnown RBP0.22□□□□□ -2.37
LDHBP3-201ENST00000514909 ADGRG4Q8IZF6 3080 aa0.22□□□□□ -2.37
LDHBP3-201ENST00000514909 DMXL1Q9Y485 3027 aa0.21□□□□□ -2.38
LDHBP3-201ENST00000514909 MYO15AQ9UKN7 3530 aa0.2□□□□□ -2.38
LDHBP3-201ENST00000514909 SPRR2GQ9BYE4 73 aa0.2□□□□□ -2.38
LDHBP3-201ENST00000514909 ABRACLQ9P1F3 81 aa0.2□□□□□ -2.38
LDHBP3-201ENST00000514909 FLGP20930 4061 aaPredicted RBP0.19□□□□□ -2.38
LDHBP3-201ENST00000514909 KIF21BO75037 1637 aa0.19□□□□□ -2.38
LDHBP3-201ENST00000514909 SACSQ9NZJ4 4579 aa0.18□□□□□ -2.38
LDHBP3-201ENST00000514909 DNAH14Q0VDD8 3507 aa0.18□□□□□ -2.38
LDHBP3-201ENST00000514909 DNAH3Q8TD57 4116 aa0.16□□□□□ -2.38
LDHBP3-201ENST00000514909 FRYQ5TBA9 3013 aa0.16□□□□□ -2.38
LDHBP3-201ENST00000514909 SMIM27A0A1W2PRY6 76 aa0.16□□□□□ -2.38
LDHBP3-201ENST00000514909 VPS13CQ709C8 3753 aa0.16□□□□□ -2.38
LDHBP3-201ENST00000514909 ZZEF1O43149 2961 aa0.16□□□□□ -2.38
LDHBP3-201ENST00000514909 DNAH9Q9NYC9 4486 aa0.15□□□□□ -2.38
LDHBP3-201ENST00000514909 DNAH7Q8WXX0 4024 aa0.15□□□□□ -2.39
LDHBP3-201ENST00000514909 PRUNE2Q8WUY3 3088 aa0.15□□□□□ -2.39
LDHBP3-201ENST00000514909 STARD9Q9P2P6 4700 aa0.14□□□□□ -2.39
LDHBP3-201ENST00000514909 ATMQ13315 3056 aa0.13□□□□□ -2.39
LDHBP3-201ENST00000514909 PKHD1L1Q86WI1 4243 aa0.13□□□□□ -2.39
LDHBP3-201ENST00000514909 TRIOO75962 3097 aa0.12□□□□□ -2.39
LDHBP3-201ENST00000514909 LINC01546A6NGU7 62 aa0.12□□□□□ -2.39
LDHBP3-201ENST00000514909 KAAG1Q9UBP8 84 aa0.12□□□□□ -2.39
LDHBP3-201ENST00000514909 ANK3Q12955 4377 aaKnown RBP0.12□□□□□ -2.39
LDHBP3-201ENST00000514909 CHD7Q9P2D1 2997 aa0.12□□□□□ -2.39
LDHBP3-201ENST00000514909 XIRP2A4UGR9 3374 aa0.11□□□□□ -2.39
LDHBP3-201ENST00000514909 CDH23Q9H251 3354 aa0.11□□□□□ -2.39
LDHBP3-201ENST00000514909 SPENQ96T58 3664 aaKnown RBP0.11□□□□□ -2.39
LDHBP3-201ENST00000514909 IQGAP1P46940 1657 aa0.11□□□□□ -2.39
LDHBP3-201ENST00000514909 SMG1Q96Q15 3661 aaKnown RBP0.1□□□□□ -2.39
LDHBP3-201ENST00000514909 SPRR2EP22531 72 aa0.1□□□□□ -2.39
LDHBP3-201ENST00000514909 KRTAP19-6Q3LI70 58 aa0.1□□□□□ -2.39
LDHBP3-201ENST00000514909 DYNC1H1Q14204 4646 aaKnown RBP0.1□□□□□ -2.39
LDHBP3-201ENST00000514909 GOLGB1Q14789 3259 aaKnown RBP0.08□□□□□ -2.4
LDHBP3-201ENST00000514909 FAM208AQ9UK61 1670 aaKnown RBP0.08□□□□□ -2.4
LDHBP3-201ENST00000514909 AKAP9Q99996 3911 aa0.07□□□□□ -2.4
LDHBP3-201ENST00000514909 MT1AP04731 61 aa0.07□□□□□ -2.4
LDHBP3-201ENST00000514909 MMP24-AS1A0A0U1RRL7 71 aa0.06□□□□□ -2.4
LDHBP3-201ENST00000514909 MT4P47944 62 aa0.06□□□□□ -2.4
LDHBP3-201ENST00000514909 WFDC10BQ8IUB3 73 aa0.06□□□□□ -2.4
LDHBP3-201ENST00000514909 DDX60Q8IY21 1712 aaKnown RBP0.06□□□□□ -2.4
LDHBP3-201ENST00000514909 DNAH1Q9P2D7 4330 aa0.03□□□□□ -2.4
LDHBP3-201ENST00000514909 APOBP04114 4563 aaKnown RBP0.03□□□□□ -2.4
LDHBP3-201ENST00000514909 ACACAQ13085 2346 aa0.02□□□□□ -2.41
LDHBP3-201ENST00000514909 TFF3Q07654 80 aa0.01□□□□□ -2.41
LDHBP3-201ENST00000514909 M0QY20 66 aa-0.02□□□□□ -2.41
LDHBP3-201ENST00000514909 SMIM2Q9BVW6 85 aa-0.02□□□□□ -2.41
LDHBP3-201ENST00000514909 DEFB110Q30KQ9 67 aa-0.03□□□□□ -2.41
LDHBP3-201ENST00000514909 FAT1Q14517 4588 aa-0.04□□□□□ -2.42
LDHBP3-201ENST00000514909 TNP1P09430 55 aa-0.05□□□□□ -2.42
LDHBP3-201ENST00000514909 DNAH2Q9P225 4427 aa-0.05□□□□□ -2.42
LDHBP3-201ENST00000514909 IQGAP2Q13576 1575 aa-0.06□□□□□ -2.42
LDHBP3-201ENST00000514909 A8MTW9 85 aa-0.06□□□□□ -2.42
LDHBP3-201ENST00000514909 SPRR2FQ96RM1 72 aa-0.06□□□□□ -2.42
LDHBP3-201ENST00000514909 DNAH5Q8TE73 4624 aa-0.07□□□□□ -2.42
LDHBP3-201ENST00000514909 NFAT5O94916 1531 aa-0.08□□□□□ -2.42
LDHBP3-201ENST00000514909 CMYA5Q8N3K9 4069 aa-0.09□□□□□ -2.42
LDHBP3-201ENST00000514909 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms