RNA–Protein interactions for RNA: ENST00000514694.5

MATR3-239, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-239ENST00000514694 KRTAP19-4Q3LI73 84 aa7.43□□□□□ -1.22
MATR3-239ENST00000514694 H3BS24 57 aa7.41□□□□□ -1.22
MATR3-239ENST00000514694 C1orf64Q8NEQ6 169 aa7.41□□□□□ -1.22
MATR3-239ENST00000514694 MT1FP04733 61 aa7.4□□□□□ -1.22
MATR3-239ENST00000514694 ATOX1O00244 68 aa7.39□□□□□ -1.23
MATR3-239ENST00000514694 IMUPQ9GZP8 106 aa7.38□□□□□ -1.23
MATR3-239ENST00000514694 LINC00208Q96KT6 92 aa7.36□□□□□ -1.23
MATR3-239ENST00000514694 FSIP2Q5CZC0 6907 aa7.35□□□□□ -1.23
MATR3-239ENST00000514694 SCGB1A1P11684 91 aa7.35□□□□□ -1.23
MATR3-239ENST00000514694 KLKP1Q107X0 134 aa7.33□□□□□ -1.24
MATR3-239ENST00000514694 MP68P56378 58 aa7.32□□□□□ -1.24
MATR3-239ENST00000514694 C5orf47Q569G3 176 aa7.32□□□□□ -1.24
MATR3-239ENST00000514694 KRTAP10-10P60014 251 aa7.31□□□□□ -1.24
MATR3-239ENST00000514694 FAM236AA0A1B0GUQ0 79 aa7.3□□□□□ -1.24
MATR3-239ENST00000514694 FAM236BA0A1B0GV22 79 aa7.3□□□□□ -1.24
MATR3-239ENST00000514694 LCE5AQ5TCM9 118 aa7.3□□□□□ -1.24
MATR3-239ENST00000514694 LCA10Q71F78 164 aa7.29□□□□□ -1.24
MATR3-239ENST00000514694 S4R3F8 94 aa7.29□□□□□ -1.24
MATR3-239ENST00000514694 KRTAP9-3Q9BYQ3 159 aa7.28□□□□□ -1.24
MATR3-239ENST00000514694 USH2AO75445 5202 aa7.26□□□□□ -1.25
MATR3-239ENST00000514694 H3BPC8 53 aa7.23□□□□□ -1.25
MATR3-239ENST00000514694 TRAV7A0A075B6U4 112 aa7.22□□□□□ -1.25
MATR3-239ENST00000514694 CSAG1Q6PB30 78 aa7.19□□□□□ -1.26
MATR3-239ENST00000514694 CRCT1Q9UGL9 99 aa7.19□□□□□ -1.26
MATR3-239ENST00000514694 SMIM20Q8N5G0 67 aa7.17□□□□□ -1.26
MATR3-239ENST00000514694 A8MUN3 132 aa7.15□□□□□ -1.26
MATR3-239ENST00000514694 SSPOA2VEC9 5147 aa7.15□□□□□ -1.27
MATR3-239ENST00000514694 DMAC1Q96GE9 116 aa7.09□□□□□ -1.27
MATR3-239ENST00000514694 SNURFQ9Y675 71 aa7.09□□□□□ -1.27
MATR3-239ENST00000514694 SERP2Q8N6R1 65 aa7.08□□□□□ -1.28
MATR3-239ENST00000514694 NDUFC1O43677 76 aa7.07□□□□□ -1.28
MATR3-239ENST00000514694 C20orf197Q8N268 126 aa7.03□□□□□ -1.28
MATR3-239ENST00000514694 H0YAA0 97 aa6.95□□□□□ -1.3
MATR3-239ENST00000514694 SPRR2GQ9BYE4 73 aa6.94□□□□□ -1.3
MATR3-239ENST00000514694 COX7CP15954 63 aa6.92□□□□□ -1.3
MATR3-239ENST00000514694 ADM2Q7Z4H4 148 aa6.92□□□□□ -1.3
MATR3-239ENST00000514694 ACYP2P14621 99 aa6.91□□□□□ -1.3
MATR3-239ENST00000514694 FCGBPQ9Y6R7 5405 aaPredicted RBP6.9□□□□□ -1.3
MATR3-239ENST00000514694 SPANXA2-OT1Q8N9U9 137 aa6.9□□□□□ -1.3
MATR3-239ENST00000514694 CYSTM1Q9H1C7 97 aa6.89□□□□□ -1.31
MATR3-239ENST00000514694 MT1BP07438 61 aa6.87□□□□□ -1.31
MATR3-239ENST00000514694 KRTAP19-8Q3LI54 63 aa6.86□□□□□ -1.31
MATR3-239ENST00000514694 KRTAP19-6Q3LI70 58 aa6.86□□□□□ -1.31
MATR3-239ENST00000514694 P0C880 135 aa6.84□□□□□ -1.31
MATR3-239ENST00000514694 CRIPTQ9P021 101 aa6.84□□□□□ -1.31
MATR3-239ENST00000514694 ANAPC13Q9BS18 74 aa6.81□□□□□ -1.32
MATR3-239ENST00000514694 H7BZZ5 65 aa6.8□□□□□ -1.32
MATR3-239ENST00000514694 CHKB-CPT1BH3BT56 60 aa6.79□□□□□ -1.32
MATR3-239ENST00000514694 Q5VV11 94 aa6.79□□□□□ -1.32
MATR3-239ENST00000514694 KRTAP5-3Q6L8H2 238 aa6.74□□□□□ -1.33
MATR3-239ENST00000514694 CCDC179H3BU77 68 aa6.73□□□□□ -1.33
MATR3-239ENST00000514694 SPTSSBQ8NFR3 76 aa6.73□□□□□ -1.33
MATR3-239ENST00000514694 COA5Q86WW8 74 aa6.72□□□□□ -1.33
MATR3-239ENST00000514694 R4GN34 69 aa6.68□□□□□ -1.34
MATR3-239ENST00000514694 M0QZ58 72 aa6.66□□□□□ -1.34
MATR3-239ENST00000514694 MACF1Q9UPN3 7388 aaKnown RBP6.62□□□□□ -1.35
MATR3-239ENST00000514694 A6NN06 94 aa6.61□□□□□ -1.35
MATR3-239ENST00000514694 KRTAP10-5P60370 271 aa6.61□□□□□ -1.35
MATR3-239ENST00000514694 LINC01554Q52M75 96 aa6.56□□□□□ -1.36
MATR3-239ENST00000514694 SYNE2Q8WXH0 6885 aaKnown RBP6.55□□□□□ -1.36
MATR3-239ENST00000514694 KRTAP13-4Q3LI77 160 aa6.52□□□□□ -1.37
MATR3-239ENST00000514694 MT1XP80297 61 aa6.5□□□□□ -1.37
MATR3-239ENST00000514694 PLAC4Q8WY50 150 aa6.5□□□□□ -1.37
MATR3-239ENST00000514694 SVIPQ8NHG7 77 aa6.47□□□□□ -1.37
MATR3-239ENST00000514694 ATP5EP56381 51 aaPredicted RBP6.46□□□□□ -1.38
MATR3-239ENST00000514694 SEC61GP60059 68 aa6.41□□□□□ -1.38
MATR3-239ENST00000514694 TMEM258P61165 79 aa6.41□□□□□ -1.38
MATR3-239ENST00000514694 SERP1Q9Y6X1 66 aa6.41□□□□□ -1.38
MATR3-239ENST00000514694 PRO2289Q9P1D8 64 aa6.38□□□□□ -1.39
MATR3-239ENST00000514694 A0A1B0GU33 70 aa6.35□□□□□ -1.39
MATR3-239ENST00000514694 SPATA8Q6RVD6 105 aa6.35□□□□□ -1.39
MATR3-239ENST00000514694 A0A1B0GU69 56 aa6.33□□□□□ -1.4
MATR3-239ENST00000514694 KRTAP6-3Q3LI67 103 aa6.32□□□□□ -1.4
MATR3-239ENST00000514694 A0A0D9SG42 100 aa6.3□□□□□ -1.4
MATR3-239ENST00000514694 KMT2DO14686 5537 aa6.29□□□□□ -1.4
MATR3-239ENST00000514694 LINC01558Q9Y6Z2 57 aa6.24□□□□□ -1.41
MATR3-239ENST00000514694 KRTAP12-2P59991 146 aa6.23□□□□□ -1.41
MATR3-239ENST00000514694 KRTAP10-7P60409 375 aaPredicted RBP6.21□□□□□ -1.42
MATR3-239ENST00000514694 A8MU10 97 aa6.19□□□□□ -1.42
MATR3-239ENST00000514694 KRTAP12-1P59990 96 aa6.19□□□□□ -1.42
MATR3-239ENST00000514694 CAMK2N1Q7Z7J9 78 aa6.18□□□□□ -1.42
MATR3-239ENST00000514694 MUC12Q9UKN1 5478 aa6.17□□□□□ -1.42
MATR3-239ENST00000514694 KRTAP5-9P26371 169 aa6.16□□□□□ -1.42
MATR3-239ENST00000514694 PRR15LQ9BU68 103 aa6.16□□□□□ -1.42
MATR3-239ENST00000514694 SPINT4Q6UDR6 99 aa6.15□□□□□ -1.42
MATR3-239ENST00000514694 PCP4P48539 62 aa6.14□□□□□ -1.43
MATR3-239ENST00000514694 KRTAP10-12P60413 245 aa6.14□□□□□ -1.43
MATR3-239ENST00000514694 NEBP20929 6669 aa6.12□□□□□ -1.43
MATR3-239ENST00000514694 SMIM26A0A096LP01 95 aa6.12□□□□□ -1.43
MATR3-239ENST00000514694 KRTAP8-1Q8IUC2 63 aa6.09□□□□□ -1.43
MATR3-239ENST00000514694 MDN1Q9NU22 5596 aa6.05□□□□□ -1.44
MATR3-239ENST00000514694 SPRR2FQ96RM1 72 aa6.04□□□□□ -1.44
MATR3-239ENST00000514694 UQCR11O14957 56 aa6□□□□□ -1.45
MATR3-239ENST00000514694 Q1T7F1 81 aa6□□□□□ -1.45
MATR3-239ENST00000514694 KRTAP15-1Q3LI76 137 aa6□□□□□ -1.45
MATR3-239ENST00000514694 PSPHP1O15172 72 aa5.99□□□□□ -1.45
MATR3-239ENST00000514694 V9GYY9 64 aa5.96□□□□□ -1.46
MATR3-239ENST00000514694 MIR22HGQ0VDD5 57 aa5.92□□□□□ -1.46
MATR3-239ENST00000514694 RPS28P62857 69 aaKnown RBP5.91□□□□□ -1.46
MATR3-239ENST00000514694 C10orf95Q9H7T3 257 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms