RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 DNAH6Q9C0G6 4158 aa0.12□□□□□ -2.39
RNF4-219ENST00000513450 IQGAP2Q13576 1575 aa0.12□□□□□ -2.39
RNF4-219ENST00000513450 WDFY4Q6ZS81 3184 aa0.12□□□□□ -2.39
RNF4-219ENST00000513450 IGLV5-48A0A075B6I7 105 aa0.12□□□□□ -2.39
RNF4-219ENST00000513450 H0YGG7 62 aa0.12□□□□□ -2.39
RNF4-219ENST00000513450 LRP2P98164 4655 aa0.12□□□□□ -2.39
RNF4-219ENST00000513450 KRTAP6-2Q3LI66 62 aa0.12□□□□□ -2.39
RNF4-219ENST00000513450 SMIM2Q9BVW6 85 aa0.12□□□□□ -2.39
RNF4-219ENST00000513450 HERC2O95714 4834 aa0.12□□□□□ -2.39
RNF4-219ENST00000513450 NF1P21359 2839 aa0.12□□□□□ -2.39
RNF4-219ENST00000513450 TOP2AP11388 1531 aaKnown RBP0.12□□□□□ -2.39
RNF4-219ENST00000513450 BOD1L1Q8NFC6 3051 aa0.12□□□□□ -2.39
RNF4-219ENST00000513450 WDR87Q6ZQQ6 2873 aa0.12□□□□□ -2.39
RNF4-219ENST00000513450 SRRM2Q9UQ35 2752 aaKnown RBP0.11□□□□□ -2.39
RNF4-219ENST00000513450 ITPR2Q14571 2701 aa0.11□□□□□ -2.39
RNF4-219ENST00000513450 ZZEF1O43149 2961 aa0.11□□□□□ -2.39
RNF4-219ENST00000513450 H3BUA1 57 aa0.11□□□□□ -2.39
RNF4-219ENST00000513450 USH2AO75445 5202 aa0.11□□□□□ -2.39
RNF4-219ENST00000513450 DMXL1Q9Y485 3027 aa0.11□□□□□ -2.39
RNF4-219ENST00000513450 DNAH7Q8WXX0 4024 aa0.11□□□□□ -2.39
RNF4-219ENST00000513450 DNAH2Q9P225 4427 aa0.11□□□□□ -2.39
RNF4-219ENST00000513450 FAM208AQ9UK61 1670 aaKnown RBP0.11□□□□□ -2.39
RNF4-219ENST00000513450 VPS13DQ5THJ4 4388 aa0.1□□□□□ -2.39
RNF4-219ENST00000513450 NBEAQ8NFP9 2946 aa0.1□□□□□ -2.39
RNF4-219ENST00000513450 CENPEQ02224 2701 aa0.1□□□□□ -2.39
RNF4-219ENST00000513450 RELNP78509 3460 aa0.1□□□□□ -2.39
RNF4-219ENST00000513450 DYNC2H1Q8NCM8 4307 aaKnown RBP0.1□□□□□ -2.39
RNF4-219ENST00000513450 SPRR2BP35325 72 aa0.1□□□□□ -2.39
RNF4-219ENST00000513450 ZFHX4Q86UP3 3567 aa0.1□□□□□ -2.39
RNF4-219ENST00000513450 A0A0C4DFX4 3053 aa0.1□□□□□ -2.39
RNF4-219ENST00000513450 FAT1Q14517 4588 aa0.1□□□□□ -2.39
RNF4-219ENST00000513450 MUC12Q9UKN1 5478 aa0.09□□□□□ -2.39
RNF4-219ENST00000513450 MMP24-AS1A0A0U1RRL7 71 aa0.09□□□□□ -2.4
RNF4-219ENST00000513450 H3BNG1 76 aa0.09□□□□□ -2.4
RNF4-219ENST00000513450 CEP350Q5VT06 3117 aa0.09□□□□□ -2.4
RNF4-219ENST00000513450 LAMA5O15230 3695 aa0.09□□□□□ -2.4
RNF4-219ENST00000513450 DNAH1Q9P2D7 4330 aa0.09□□□□□ -2.4
RNF4-219ENST00000513450 LRBAP50851 2863 aa0.08□□□□□ -2.4
RNF4-219ENST00000513450 TACC2O95359 2948 aa0.08□□□□□ -2.4
RNF4-219ENST00000513450 DNAH12Q6ZR08 3092 aa0.07□□□□□ -2.4
RNF4-219ENST00000513450 EYSQ5T1H1 3165 aa0.07□□□□□ -2.4
RNF4-219ENST00000513450 ACACAQ13085 2346 aa0.07□□□□□ -2.4
RNF4-219ENST00000513450 NDUFA1O15239 70 aa0.07□□□□□ -2.4
RNF4-219ENST00000513450 SPEGQ15772 3267 aa0.07□□□□□ -2.4
RNF4-219ENST00000513450 DNAH8Q96JB1 4490 aa0.07□□□□□ -2.4
RNF4-219ENST00000513450 LAMA2P24043 3122 aaKnown RBP0.07□□□□□ -2.4
RNF4-219ENST00000513450 CSMD1Q96PZ7 3565 aa0.06□□□□□ -2.4
RNF4-219ENST00000513450 C9orf92A6NGG3 77 aa0.06□□□□□ -2.4
RNF4-219ENST00000513450 NOP10Q9NPE3 64 aaKnown RBP0.06□□□□□ -2.4
RNF4-219ENST00000513450 ATP7AQ04656 1500 aa0.06□□□□□ -2.4
RNF4-219ENST00000513450 PCNTO95613 3336 aa0.05□□□□□ -2.4
RNF4-219ENST00000513450 CFAP47Q6ZTR5 3102 aa0.05□□□□□ -2.4
RNF4-219ENST00000513450 CRYBG3Q68DQ2 2970 aa0.05□□□□□ -2.4
RNF4-219ENST00000513450 SRCAPQ6ZRS2 3230 aa0.05□□□□□ -2.4
RNF4-219ENST00000513450 TRPM2O94759 1503 aa0.05□□□□□ -2.4
RNF4-219ENST00000513450 MT1AP04731 61 aa0.05□□□□□ -2.4
RNF4-219ENST00000513450 SPRR2AP35326 72 aa0.05□□□□□ -2.4
RNF4-219ENST00000513450 STARD9Q9P2P6 4700 aa0.05□□□□□ -2.4
RNF4-219ENST00000513450 EP400Q96L91 3159 aa0.05□□□□□ -2.4
RNF4-219ENST00000513450 CLTCL1P53675 1640 aa0.05□□□□□ -2.4
RNF4-219ENST00000513450 FRYLO94915 3013 aa0.05□□□□□ -2.4
RNF4-219ENST00000513450 COL12A1Q99715 3063 aa0.05□□□□□ -2.4
RNF4-219ENST00000513450 RANBP2P49792 3224 aaKnown RBP0.04□□□□□ -2.4
RNF4-219ENST00000513450 LAMA3Q16787 3333 aa0.04□□□□□ -2.4
RNF4-219ENST00000513450 SZT2Q5T011 3432 aa0.04□□□□□ -2.4
RNF4-219ENST00000513450 PLECQ15149 4684 aaKnown RBP0.04□□□□□ -2.4
RNF4-219ENST00000513450 M0QY20 66 aa0.04□□□□□ -2.4
RNF4-219ENST00000513450 VCANP13611 3396 aa0.03□□□□□ -2.4
RNF4-219ENST00000513450 FRYQ5TBA9 3013 aa0.03□□□□□ -2.4
RNF4-219ENST00000513450 SAMD9LQ8IVG5 1584 aa0.03□□□□□ -2.4
RNF4-219ENST00000513450 FREM2Q5SZK8 3169 aa0.03□□□□□ -2.4
RNF4-219ENST00000513450 UNC80Q8N2C7 3258 aa0.03□□□□□ -2.4
RNF4-219ENST00000513450 SPRR2EP22531 72 aa0.03□□□□□ -2.4
RNF4-219ENST00000513450 DEFB131AP59861 70 aa0.03□□□□□ -2.4
RNF4-219ENST00000513450 DEFB110Q30KQ9 67 aa0.03□□□□□ -2.4
RNF4-219ENST00000513450 CLPSL2Q6UWE3 100 aa0.03□□□□□ -2.4
RNF4-219ENST00000513450 DMXL2Q8TDJ6 3036 aa0.03□□□□□ -2.4
RNF4-219ENST00000513450 DCHS1Q96JQ0 3298 aa0.03□□□□□ -2.41
RNF4-219ENST00000513450 BRCA2P51587 3418 aa0.03□□□□□ -2.41
RNF4-219ENST00000513450 MGAQ8IWI9 3026 aa0.03□□□□□ -2.41
RNF4-219ENST00000513450 DNAH10Q8IVF4 4471 aa0.02□□□□□ -2.41
RNF4-219ENST00000513450 MYO15AQ9UKN7 3530 aa0.02□□□□□ -2.41
RNF4-219ENST00000513450 C5orf42Q9H799 3197 aa0.02□□□□□ -2.41
RNF4-219ENST00000513450 LAMA1P25391 3075 aa0.02□□□□□ -2.41
RNF4-219ENST00000513450 CFAP54Q96N23 3096 aa0.02□□□□□ -2.41
RNF4-219ENST00000513450 HTTP42858 3142 aa0.02□□□□□ -2.41
RNF4-219ENST00000513450 MKI67P46013 3256 aaKnown RBP0.02□□□□□ -2.41
RNF4-219ENST00000513450 CSMD2Q7Z408 3487 aa0.01□□□□□ -2.41
RNF4-219ENST00000513450 VPS13CQ709C8 3753 aa0.01□□□□□ -2.41
RNF4-219ENST00000513450 A8MTW9 85 aa0.01□□□□□ -2.41
RNF4-219ENST00000513450 M0QZ58 72 aa0.01□□□□□ -2.41
RNF4-219ENST00000513450 TNP1P09430 55 aa0.01□□□□□ -2.41
RNF4-219ENST00000513450 POLR2KP53803 58 aaKnown RBP0.01□□□□□ -2.41
RNF4-219ENST00000513450 KRTAP19-6Q3LI70 58 aa0.01□□□□□ -2.41
RNF4-219ENST00000513450 KRTAP19-5Q3LI72 72 aa0.01□□□□□ -2.41
RNF4-219ENST00000513450 SPRR2FQ96RM1 72 aa0.01□□□□□ -2.41
RNF4-219ENST00000513450 SPRR2GQ9BYE4 73 aa0.01□□□□□ -2.41
RNF4-219ENST00000513450 DYNC1H1Q14204 4646 aaKnown RBP0.01□□□□□ -2.41
RNF4-219ENST00000513450 DNAH14Q0VDD8 3507 aa0.01□□□□□ -2.41
RNF4-219ENST00000513450 USP34Q70CQ2 3546 aa0□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms