RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 ASPMQ8IZT6 3477 aa1.65□□□□□ -2.15
CHD1-209ENST00000512844 NIPBLQ6KC79 2804 aaeCLIP1.65□□□□□ -2.15
CHD1-209ENST00000512844 LAMA5O15230 3695 aa1.64□□□□□ -2.15
CHD1-209ENST00000512844 SPINK1P00995 79 aa1.64□□□□□ -2.15
CHD1-209ENST00000512844 RPS29P62273 56 aaKnown RBP1.64□□□□□ -2.15
CHD1-209ENST00000512844 NF1P21359 2839 aa1.64□□□□□ -2.15
CHD1-209ENST00000512844 ATRQ13535 2644 aa1.63□□□□□ -2.15
CHD1-209ENST00000512844 TEP1Q99973 2627 aaKnown RBP1.63□□□□□ -2.15
CHD1-209ENST00000512844 CRIPTQ9P021 101 aa1.63□□□□□ -2.15
CHD1-209ENST00000512844 HIVEP1P15822 2718 aa1.63□□□□□ -2.15
CHD1-209ENST00000512844 FCGBPQ9Y6R7 5405 aaPredicted RBP1.63□□□□□ -2.15
CHD1-209ENST00000512844 ANK3Q12955 4377 aaKnown RBP1.63□□□□□ -2.15
CHD1-209ENST00000512844 NSD1Q96L73 2696 aaPredicted RBP1.63□□□□□ -2.15
CHD1-209ENST00000512844 FASNP49327 2511 aaKnown RBP1.62□□□□□ -2.15
CHD1-209ENST00000512844 RELNP78509 3460 aa1.62□□□□□ -2.15
CHD1-209ENST00000512844 F8P00451 2351 aa1.62□□□□□ -2.15
CHD1-209ENST00000512844 SVEP1Q4LDE5 3571 aa1.62□□□□□ -2.15
CHD1-209ENST00000512844 AKAP9Q99996 3911 aa1.61□□□□□ -2.15
CHD1-209ENST00000512844 ZFHX3Q15911 3703 aa1.61□□□□□ -2.15
CHD1-209ENST00000512844 H1FX-AS1Q4G0G2 97 aa1.6□□□□□ -2.15
CHD1-209ENST00000512844 COX6B2Q6YFQ2 88 aa1.6□□□□□ -2.15
CHD1-209ENST00000512844 PDZD2O15018 2839 aa1.59□□□□□ -2.15
CHD1-209ENST00000512844 MAST4O15021 2626 aa1.59□□□□□ -2.15
CHD1-209ENST00000512844 VWFP04275 2813 aa1.58□□□□□ -2.16
CHD1-209ENST00000512844 ITPR2Q14571 2701 aa1.57□□□□□ -2.16
CHD1-209ENST00000512844 HELZ2Q9BYK8 2649 aaKnown RBP1.57□□□□□ -2.16
CHD1-209ENST00000512844 NBPF19A0A087WUL8 3843 aa1.57□□□□□ -2.16
CHD1-209ENST00000512844 VPS13CQ709C8 3753 aa1.56□□□□□ -2.16
CHD1-209ENST00000512844 TENM1Q9UKZ4 2725 aa1.56□□□□□ -2.16
CHD1-209ENST00000512844 DNAH1Q9P2D7 4330 aa1.56□□□□□ -2.16
CHD1-209ENST00000512844 H0YAA0 97 aa1.56□□□□□ -2.16
CHD1-209ENST00000512844 FLNBO75369 2602 aaKnown RBP1.56□□□□□ -2.16
CHD1-209ENST00000512844 HECTD1Q9ULT8 2610 aa1.56□□□□□ -2.16
CHD1-209ENST00000512844 TENM3Q9P273 2699 aa1.56□□□□□ -2.16
CHD1-209ENST00000512844 ALMS1Q8TCU4 4167 aa1.55□□□□□ -2.16
CHD1-209ENST00000512844 NBEAL1Q6ZS30 2694 aa1.55□□□□□ -2.16
CHD1-209ENST00000512844 TENM4Q6N022 2769 aa1.54□□□□□ -2.16
CHD1-209ENST00000512844 NOTCH1P46531 2555 aa1.53□□□□□ -2.16
CHD1-209ENST00000512844 STAB2Q8WWQ8 2551 aa1.53□□□□□ -2.16
CHD1-209ENST00000512844 OTOGQ6ZRI0 2925 aa1.53□□□□□ -2.16
CHD1-209ENST00000512844 TENM2Q9NT68 2774 aa1.53□□□□□ -2.16
CHD1-209ENST00000512844 STAB1Q9NY15 2570 aa1.52□□□□□ -2.17
CHD1-209ENST00000512844 C10orf95Q9H7T3 257 aa1.52□□□□□ -2.17
CHD1-209ENST00000512844 S4R3F8 94 aa1.52□□□□□ -2.17
CHD1-209ENST00000512844 HUWE1Q7Z6Z7 4374 aaKnown RBP1.52□□□□□ -2.17
CHD1-209ENST00000512844 CSMD2Q7Z408 3487 aa1.52□□□□□ -2.17
CHD1-209ENST00000512844 MGAM2Q2M2H8 2515 aa1.51□□□□□ -2.17
CHD1-209ENST00000512844 DNAH3Q8TD57 4116 aa1.51□□□□□ -2.17
CHD1-209ENST00000512844 DYNC2H1Q8NCM8 4307 aaKnown RBP1.51□□□□□ -2.17
CHD1-209ENST00000512844 PKD1L1Q8TDX9 2849 aa1.51□□□□□ -2.17
CHD1-209ENST00000512844 C9orf92A6NGG3 77 aa1.51□□□□□ -2.17
CHD1-209ENST00000512844 COL6A5A8TX70 2615 aa1.51□□□□□ -2.17
CHD1-209ENST00000512844 FLG2Q5D862 2391 aaPredicted RBP1.5□□□□□ -2.17
CHD1-209ENST00000512844 DNAH17Q9UFH2 4485 aa1.5□□□□□ -2.17
CHD1-209ENST00000512844 M0QZ58 72 aa1.5□□□□□ -2.17
CHD1-209ENST00000512844 SRRM2Q9UQ35 2752 aaKnown RBP1.5□□□□□ -2.17
CHD1-209ENST00000512844 DNAH10Q8IVF4 4471 aa1.5□□□□□ -2.17
CHD1-209ENST00000512844 VPS13DQ5THJ4 4388 aa1.49□□□□□ -2.17
CHD1-209ENST00000512844 A0A0D9SG42 100 aa1.49□□□□□ -2.17
CHD1-209ENST00000512844 ZNF469Q96JG9 3925 aaPredicted RBP1.48□□□□□ -2.17
CHD1-209ENST00000512844 TGP01266 2768 aa1.47□□□□□ -2.17
CHD1-209ENST00000512844 DNAH8Q96JB1 4490 aa1.47□□□□□ -2.17
CHD1-209ENST00000512844 DNAH9Q9NYC9 4486 aa1.46□□□□□ -2.17
CHD1-209ENST00000512844 TRRAPQ9Y4A5 3859 aa1.46□□□□□ -2.18
CHD1-209ENST00000512844 ANK2Q01484 3957 aa1.46□□□□□ -2.18
CHD1-209ENST00000512844 CUBNO60494 3623 aa1.46□□□□□ -2.18
CHD1-209ENST00000512844 PLECQ15149 4684 aaKnown RBP1.45□□□□□ -2.18
CHD1-209ENST00000512844 DNAH6Q9C0G6 4158 aa1.45□□□□□ -2.18
CHD1-209ENST00000512844 MEGF8Q7Z7M0 2845 aa1.45□□□□□ -2.18
CHD1-209ENST00000512844 CMYA5Q8N3K9 4069 aa1.44□□□□□ -2.18
CHD1-209ENST00000512844 Q5VSD8 79 aa1.44□□□□□ -2.18
CHD1-209ENST00000512844 DNAH2Q9P225 4427 aa1.43□□□□□ -2.18
CHD1-209ENST00000512844 SMR3BP02814 79 aaPredicted RBP1.42□□□□□ -2.18
CHD1-209ENST00000512844 HECTD4Q9Y4D8 3996 aa1.42□□□□□ -2.18
CHD1-209ENST00000512844 PRKDCP78527 4128 aaKnown RBP1.42□□□□□ -2.18
CHD1-209ENST00000512844 DNAH11Q96DT5 4516 aa1.41□□□□□ -2.18
CHD1-209ENST00000512844 SACSQ9NZJ4 4579 aa1.4□□□□□ -2.19
CHD1-209ENST00000512844 DNAH7Q8WXX0 4024 aa1.4□□□□□ -2.19
CHD1-209ENST00000512844 COL7A1Q02388 2944 aa1.4□□□□□ -2.19
CHD1-209ENST00000512844 DMBT1Q9UGM3 2413 aaPredicted RBP1.39□□□□□ -2.19
CHD1-209ENST00000512844 STARD9Q9P2P6 4700 aa1.39□□□□□ -2.19
CHD1-209ENST00000512844 DNAH5Q8TE73 4624 aa1.38□□□□□ -2.19
CHD1-209ENST00000512844 LYSTQ99698 3801 aa1.38□□□□□ -2.19
CHD1-209ENST00000512844 LRP1BQ9NZR2 4599 aa1.37□□□□□ -2.19
CHD1-209ENST00000512844 KRTAP10-4P60372 401 aaPredicted RBP1.37□□□□□ -2.19
CHD1-209ENST00000512844 FRAS1Q86XX4 4008 aa1.37□□□□□ -2.19
CHD1-209ENST00000512844 TNP1P09430 55 aa1.35□□□□□ -2.19
CHD1-209ENST00000512844 PKHD1L1Q86WI1 4243 aa1.34□□□□□ -2.19
CHD1-209ENST00000512844 DYNC1H1Q14204 4646 aaKnown RBP1.34□□□□□ -2.19
CHD1-209ENST00000512844 CSMD3Q7Z407 3707 aa1.33□□□□□ -2.2
CHD1-209ENST00000512844 VPS13BQ7Z7G8 4022 aa1.33□□□□□ -2.2
CHD1-209ENST00000512844 APOBP04114 4563 aaKnown RBP1.33□□□□□ -2.2
CHD1-209ENST00000512844 PKD1P98161 4303 aa1.31□□□□□ -2.2
CHD1-209ENST00000512844 FAT2Q9NYQ8 4349 aa1.31□□□□□ -2.2
CHD1-209ENST00000512844 KMT2AQ03164 3969 aa1.3□□□□□ -2.2
CHD1-209ENST00000512844 PKHD1P08F94 4074 aa1.3□□□□□ -2.2
CHD1-209ENST00000512844 FAT3Q8TDW7 4589 aa1.3□□□□□ -2.2
CHD1-209ENST00000512844 FAT1Q14517 4588 aa1.3□□□□□ -2.2
CHD1-209ENST00000512844 TNXBP22105 4242 aa1.29□□□□□ -2.2
CHD1-209ENST00000512844 LRP1Q07954 4544 aaKnown RBP1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms