RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 KRTAP13-4Q3LI77 160 aa2.94□□□□□ -1.94
TRAPPC11-209ENST00000512476 TGP01266 2768 aa2.94□□□□□ -1.94
TRAPPC11-209ENST00000512476 LCE3BQ5TA77 95 aa2.93□□□□□ -1.94
TRAPPC11-209ENST00000512476 DNAH2Q9P225 4427 aa2.92□□□□□ -1.94
TRAPPC11-209ENST00000512476 HYDINQ4G0P3 5121 aa2.92□□□□□ -1.94
TRAPPC11-209ENST00000512476 DNAH17Q9UFH2 4485 aa2.91□□□□□ -1.94
TRAPPC11-209ENST00000512476 FRAS1Q86XX4 4008 aa2.89□□□□□ -1.95
TRAPPC11-209ENST00000512476 PRLHP81277 87 aa2.89□□□□□ -1.95
TRAPPC11-209ENST00000512476 Q6ZSA8 131 aa2.88□□□□□ -1.95
TRAPPC11-209ENST00000512476 IGLV5-48A0A075B6I7 105 aa2.87□□□□□ -1.95
TRAPPC11-209ENST00000512476 KRTAP13-1Q8IUC0 172 aa2.87□□□□□ -1.95
TRAPPC11-209ENST00000512476 DEFB105AQ8NG35 78 aa2.87□□□□□ -1.95
TRAPPC11-209ENST00000512476 SACSQ9NZJ4 4579 aa2.87□□□□□ -1.95
TRAPPC11-209ENST00000512476 HECTD4Q9Y4D8 3996 aa2.87□□□□□ -1.95
TRAPPC11-209ENST00000512476 RPL37P61927 97 aaKnown RBP2.87□□□□□ -1.95
TRAPPC11-209ENST00000512476 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
TRAPPC11-209ENST00000512476 KRTAP17-1Q9BYP8 105 aa2.87□□□□□ -1.95
TRAPPC11-209ENST00000512476 FAT2Q9NYQ8 4349 aa2.87□□□□□ -1.95
TRAPPC11-209ENST00000512476 DNAH11Q96DT5 4516 aa2.87□□□□□ -1.95
TRAPPC11-209ENST00000512476 A0A1B0GVY2 172 aa2.86□□□□□ -1.95
TRAPPC11-209ENST00000512476 MT3P25713 68 aa2.86□□□□□ -1.95
TRAPPC11-209ENST00000512476 PKD1P98161 4303 aa2.85□□□□□ -1.95
TRAPPC11-209ENST00000512476 RYR2Q92736 4967 aa2.84□□□□□ -1.95
TRAPPC11-209ENST00000512476 DNAH5Q8TE73 4624 aa2.84□□□□□ -1.95
TRAPPC11-209ENST00000512476 SPRR1BP22528 89 aa2.84□□□□□ -1.95
TRAPPC11-209ENST00000512476 C10orf95Q9H7T3 257 aa2.84□□□□□ -1.96
TRAPPC11-209ENST00000512476 DNAH8Q96JB1 4490 aa2.83□□□□□ -1.96
TRAPPC11-209ENST00000512476 KRTAP12-1P59990 96 aa2.81□□□□□ -1.96
TRAPPC11-209ENST00000512476 KRTAP13-3Q3SY46 172 aa2.81□□□□□ -1.96
TRAPPC11-209ENST00000512476 KMT2CQ8NEZ4 4911 aaKnown RBP2.81□□□□□ -1.96
TRAPPC11-209ENST00000512476 KRTAP9-8Q9BYQ0 159 aa2.8□□□□□ -1.96
TRAPPC11-209ENST00000512476 PCOTHQ58A44 107 aa2.8□□□□□ -1.96
TRAPPC11-209ENST00000512476 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
TRAPPC11-209ENST00000512476 SMR3BP02814 79 aaPredicted RBP2.78□□□□□ -1.96
TRAPPC11-209ENST00000512476 LRP1BQ9NZR2 4599 aa2.78□□□□□ -1.97
TRAPPC11-209ENST00000512476 KRTAP10-12P60413 245 aa2.77□□□□□ -1.97
TRAPPC11-209ENST00000512476 PKHD1P08F94 4074 aa2.77□□□□□ -1.97
TRAPPC11-209ENST00000512476 DYNC1H1Q14204 4646 aaKnown RBP2.77□□□□□ -1.97
TRAPPC11-209ENST00000512476 KRTAP10-4P60372 401 aaPredicted RBP2.76□□□□□ -1.97
TRAPPC11-209ENST00000512476 SPINK6Q6UWN8 80 aa2.76□□□□□ -1.97
TRAPPC11-209ENST00000512476 RYR3Q15413 4870 aa2.76□□□□□ -1.97
TRAPPC11-209ENST00000512476 K7EQZ3 153 aa2.75□□□□□ -1.97
TRAPPC11-209ENST00000512476 SRRM2Q9UQ35 2752 aaKnown RBP2.75□□□□□ -1.97
TRAPPC11-209ENST00000512476 APOBP04114 4563 aaKnown RBP2.74□□□□□ -1.97
TRAPPC11-209ENST00000512476 H0YAA0 97 aa2.73□□□□□ -1.97
TRAPPC11-209ENST00000512476 LCE1DQ5T752 114 aa2.73□□□□□ -1.97
TRAPPC11-209ENST00000512476 VPS13BQ7Z7G8 4022 aa2.73□□□□□ -1.97
TRAPPC11-209ENST00000512476 MRPL34Q9BQ48 92 aaKnown RBP2.72□□□□□ -1.97
TRAPPC11-209ENST00000512476 SPRR5A0A1B0GTR4 108 aa2.71□□□□□ -1.98
TRAPPC11-209ENST00000512476 KRTAP10-10P60014 251 aa2.71□□□□□ -1.98
TRAPPC11-209ENST00000512476 Q5VSD8 79 aa2.71□□□□□ -1.98
TRAPPC11-209ENST00000512476 FAT1Q14517 4588 aa2.68□□□□□ -1.98
TRAPPC11-209ENST00000512476 KRTAP5-3Q6L8H2 238 aa2.68□□□□□ -1.98
TRAPPC11-209ENST00000512476 TP53AIP1Q9HCN2 124 aa2.68□□□□□ -1.98
TRAPPC11-209ENST00000512476 HSPG2P98160 4391 aa2.68□□□□□ -1.98
TRAPPC11-209ENST00000512476 RYR1P21817 5038 aa2.68□□□□□ -1.98
TRAPPC11-209ENST00000512476 PKHD1L1Q86WI1 4243 aa2.67□□□□□ -1.98
TRAPPC11-209ENST00000512476 SPINK1P00995 79 aa2.67□□□□□ -1.98
TRAPPC11-209ENST00000512476 KRTAP6-3Q3LI67 103 aa2.67□□□□□ -1.98
TRAPPC11-209ENST00000512476 EPPK1P58107 5090 aaKnown RBP2.67□□□□□ -1.98
TRAPPC11-209ENST00000512476 RPS29P62273 56 aaKnown RBP2.67□□□□□ -1.98
TRAPPC11-209ENST00000512476 KIAA1109Q2LD37 5005 aa2.65□□□□□ -1.98
TRAPPC11-209ENST00000512476 MMP24-AS1A0A0U1RRL7 71 aa2.65□□□□□ -1.99
TRAPPC11-209ENST00000512476 WFDC13Q8IUB5 93 aa2.65□□□□□ -1.99
TRAPPC11-209ENST00000512476 KRTAP4-8A0A0G2JLE6 195 aa2.64□□□□□ -1.99
TRAPPC11-209ENST00000512476 MT1HL1P0DM35 61 aa2.62□□□□□ -1.99
TRAPPC11-209ENST00000512476 KRTAP4-5Q9BYR2 181 aa2.62□□□□□ -1.99
TRAPPC11-209ENST00000512476 TNXBP22105 4242 aa2.59□□□□□ -2
TRAPPC11-209ENST00000512476 KRTAP10-7P60409 375 aaPredicted RBP2.59□□□□□ -2
TRAPPC11-209ENST00000512476 LRP1Q07954 4544 aaKnown RBP2.58□□□□□ -2
TRAPPC11-209ENST00000512476 FAT3Q8TDW7 4589 aa2.58□□□□□ -2
TRAPPC11-209ENST00000512476 BIRC6Q9NR09 4857 aa2.57□□□□□ -2
TRAPPC11-209ENST00000512476 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
TRAPPC11-209ENST00000512476 KRTAP4-11Q9BYQ6 195 aa2.57□□□□□ -2
TRAPPC11-209ENST00000512476 C9orf92A6NGG3 77 aa2.56□□□□□ -2
TRAPPC11-209ENST00000512476 H1FX-AS1Q4G0G2 97 aa2.54□□□□□ -2
TRAPPC11-209ENST00000512476 HERC2O95714 4834 aa2.54□□□□□ -2
TRAPPC11-209ENST00000512476 KRTAP4-9Q9BYQ8 210 aa2.54□□□□□ -2
TRAPPC11-209ENST00000512476 MYCBP2O75592 4640 aa2.53□□□□□ -2
TRAPPC11-209ENST00000512476 ABCA13Q86UQ4 5058 aa2.52□□□□□ -2.01
TRAPPC11-209ENST00000512476 DMBT1Q9UGM3 2413 aaPredicted RBP2.5□□□□□ -2.01
TRAPPC11-209ENST00000512476 KRTAP4-7Q9BYR0 210 aa2.49□□□□□ -2.01
TRAPPC11-209ENST00000512476 COX6B2Q6YFQ2 88 aa2.49□□□□□ -2.01
TRAPPC11-209ENST00000512476 KRTAP12-4P60329 112 aa2.46□□□□□ -2.02
TRAPPC11-209ENST00000512476 PCLOQ9Y6V0 5065 aa2.45□□□□□ -2.02
TRAPPC11-209ENST00000512476 KRTAP4-2Q9BYR5 136 aa2.43□□□□□ -2.02
TRAPPC11-209ENST00000512476 LPAP08519 4548 aa2.41□□□□□ -2.02
TRAPPC11-209ENST00000512476 GPR98Q8WXG9 6306 aa2.39□□□□□ -2.03
TRAPPC11-209ENST00000512476 LRP2P98164 4655 aa2.38□□□□□ -2.03
TRAPPC11-209ENST00000512476 KRTAP4-1Q9BYQ7 146 aa2.37□□□□□ -2.03
TRAPPC11-209ENST00000512476 HMCN2Q8NDA2 5059 aa2.35□□□□□ -2.03
TRAPPC11-209ENST00000512476 A0A0D9SG42 100 aa2.35□□□□□ -2.03
TRAPPC11-209ENST00000512476 MUC17Q685J3 4493 aa2.35□□□□□ -2.03
TRAPPC11-209ENST00000512476 HERC1Q15751 4861 aa2.35□□□□□ -2.03
TRAPPC11-209ENST00000512476 S4R3F8 94 aa2.31□□□□□ -2.04
TRAPPC11-209ENST00000512476 KRTAP19-2Q3LHN2 52 aa2.31□□□□□ -2.04
TRAPPC11-209ENST00000512476 KRTAP10-5P60370 271 aa2.27□□□□□ -2.05
TRAPPC11-209ENST00000512476 UBR4Q5T4S7 5183 aa2.25□□□□□ -2.05
TRAPPC11-209ENST00000512476 MUC2Q02817 5179 aa2.25□□□□□ -2.05
TRAPPC11-209ENST00000512476 RNF213Q63HN8 5207 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms