RNA–Protein interactions for RNA: ENST00000512466.1

PDCD6-209, Transcript of programmed cell death 6, humanhuman

TSL 2

Gene PDCD6, Length 3,763 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-209ENST00000512466 S4R3F8 94 aa5.63□□□□□ -1.51
PDCD6-209ENST00000512466 A0A0A0MQY5 61 aa5.62□□□□□ -1.51
PDCD6-209ENST00000512466 DYNC1H1Q14204 4646 aaKnown RBP5.62□□□□□ -1.51
PDCD6-209ENST00000512466 VPS13BQ7Z7G8 4022 aa5.61□□□□□ -1.51
PDCD6-209ENST00000512466 MYCBP2O75592 4640 aa5.6□□□□□ -1.51
PDCD6-209ENST00000512466 FAT2Q9NYQ8 4349 aa5.59□□□□□ -1.52
PDCD6-209ENST00000512466 KRTAP10-4P60372 401 aaPredicted RBP5.55□□□□□ -1.52
PDCD6-209ENST00000512466 PKD1P98161 4303 aa5.54□□□□□ -1.52
PDCD6-209ENST00000512466 RPS29P62273 56 aaKnown RBP5.54□□□□□ -1.52
PDCD6-209ENST00000512466 PKHD1P08F94 4074 aa5.53□□□□□ -1.52
PDCD6-209ENST00000512466 LUZP6Q538Z0 58 aa5.53□□□□□ -1.52
PDCD6-209ENST00000512466 RYR3Q15413 4870 aa5.52□□□□□ -1.53
PDCD6-209ENST00000512466 TPRXLQ17RH7 258 aa5.51□□□□□ -1.53
PDCD6-209ENST00000512466 KRTAP10-8P60410 259 aa5.49□□□□□ -1.53
PDCD6-209ENST00000512466 KIAA1109Q2LD37 5005 aa5.48□□□□□ -1.53
PDCD6-209ENST00000512466 KRTAP13-4Q3LI77 160 aa5.46□□□□□ -1.53
PDCD6-209ENST00000512466 KRTAP4-5Q9BYR2 181 aa5.46□□□□□ -1.54
PDCD6-209ENST00000512466 XP32Q5T750 250 aa5.44□□□□□ -1.54
PDCD6-209ENST00000512466 APOBP04114 4563 aaKnown RBP5.44□□□□□ -1.54
PDCD6-209ENST00000512466 M0QZ58 72 aa5.44□□□□□ -1.54
PDCD6-209ENST00000512466 R4GN34 69 aa5.43□□□□□ -1.54
PDCD6-209ENST00000512466 LRP1Q07954 4544 aaKnown RBP5.42□□□□□ -1.54
PDCD6-209ENST00000512466 RYR1P21817 5038 aa5.4□□□□□ -1.55
PDCD6-209ENST00000512466 KRTAP17-1Q9BYP8 105 aa5.39□□□□□ -1.55
PDCD6-209ENST00000512466 FAT3Q8TDW7 4589 aa5.39□□□□□ -1.55
PDCD6-209ENST00000512466 KRTAP10-6P60371 365 aaPredicted RBP5.38□□□□□ -1.55
PDCD6-209ENST00000512466 EPPK1P58107 5090 aaKnown RBP5.38□□□□□ -1.55
PDCD6-209ENST00000512466 MT1HL1P0DM35 61 aa5.37□□□□□ -1.55
PDCD6-209ENST00000512466 KRTAP12-2P59991 146 aa5.37□□□□□ -1.55
PDCD6-209ENST00000512466 HSPG2P98160 4391 aa5.35□□□□□ -1.55
PDCD6-209ENST00000512466 CAMK2N1Q7Z7J9 78 aa5.33□□□□□ -1.56
PDCD6-209ENST00000512466 KRTAP3-3Q9BYR6 98 aa5.32□□□□□ -1.56
PDCD6-209ENST00000512466 BIRC6Q9NR09 4857 aa5.29□□□□□ -1.56
PDCD6-209ENST00000512466 KRTAP15-1Q3LI76 137 aa5.28□□□□□ -1.56
PDCD6-209ENST00000512466 KRTAP3-2Q9BYR7 98 aa5.28□□□□□ -1.56
PDCD6-209ENST00000512466 PLAC4Q8WY50 150 aa5.25□□□□□ -1.57
PDCD6-209ENST00000512466 KRTAP12-1P59990 96 aa5.24□□□□□ -1.57
PDCD6-209ENST00000512466 SEC61BP60468 96 aaKnown RBP5.23□□□□□ -1.57
PDCD6-209ENST00000512466 HERC2O95714 4834 aa5.19□□□□□ -1.58
PDCD6-209ENST00000512466 LRP2P98164 4655 aa5.17□□□□□ -1.58
PDCD6-209ENST00000512466 ABCA13Q86UQ4 5058 aa5.1□□□□□ -1.59
PDCD6-209ENST00000512466 PKHD1L1Q86WI1 4243 aa5.07□□□□□ -1.6
PDCD6-209ENST00000512466 M0R2T5 61 aa5.06□□□□□ -1.6
PDCD6-209ENST00000512466 TNXBP22105 4242 aa5.04□□□□□ -1.6
PDCD6-209ENST00000512466 LPAP08519 4548 aa5.04□□□□□ -1.6
PDCD6-209ENST00000512466 LORP23490 312 aaPredicted RBP5.04□□□□□ -1.6
PDCD6-209ENST00000512466 PCLOQ9Y6V0 5065 aa4.93□□□□□ -1.62
PDCD6-209ENST00000512466 TNP1P09430 55 aa4.88□□□□□ -1.63
PDCD6-209ENST00000512466 HERC1Q15751 4861 aa4.86□□□□□ -1.63
PDCD6-209ENST00000512466 MUC2Q02817 5179 aa4.85□□□□□ -1.63
PDCD6-209ENST00000512466 KRTAP4-1Q9BYQ7 146 aa4.85□□□□□ -1.63
PDCD6-209ENST00000512466 PP632Q6XCG6 107 aa4.82□□□□□ -1.64
PDCD6-209ENST00000512466 LCE2DQ5TA82 110 aaPredicted RBP4.74□□□□□ -1.65
PDCD6-209ENST00000512466 HMCN2Q8NDA2 5059 aa4.73□□□□□ -1.65
PDCD6-209ENST00000512466 KRTAP10-10P60014 251 aa4.69□□□□□ -1.66
PDCD6-209ENST00000512466 FAT4Q6V0I7 4981 aa4.64□□□□□ -1.67
PDCD6-209ENST00000512466 UBR4Q5T4S7 5183 aa4.6□□□□□ -1.67
PDCD6-209ENST00000512466 RNF213Q63HN8 5207 aa4.56□□□□□ -1.68
PDCD6-209ENST00000512466 MT1HP80294 61 aa4.54□□□□□ -1.68
PDCD6-209ENST00000512466 MUC17Q685J3 4493 aa4.54□□□□□ -1.68
PDCD6-209ENST00000512466 LCE2CQ5TA81 110 aa4.52□□□□□ -1.69
PDCD6-209ENST00000512466 KRTAP19-2Q3LHN2 52 aa4.51□□□□□ -1.69
PDCD6-209ENST00000512466 PRO2289Q9P1D8 64 aa4.51□□□□□ -1.69
PDCD6-209ENST00000512466 LCE3AQ5TA76 89 aa4.49□□□□□ -1.69
PDCD6-209ENST00000512466 FLGP20930 4061 aaPredicted RBP4.41□□□□□ -1.7
PDCD6-209ENST00000512466 MT2AP02795 61 aa4.37□□□□□ -1.71
PDCD6-209ENST00000512466 INE1O15225 51 aa4.34□□□□□ -1.71
PDCD6-209ENST00000512466 MT1FP04733 61 aa4.33□□□□□ -1.72
PDCD6-209ENST00000512466 KRTAP19-1Q8IUB9 90 aa4.32□□□□□ -1.72
PDCD6-209ENST00000512466 KRTAP9-8Q9BYQ0 159 aa4.31□□□□□ -1.72
PDCD6-209ENST00000512466 KRTAP12-3P60328 96 aa4.29□□□□□ -1.72
PDCD6-209ENST00000512466 KRTAP10-12P60413 245 aa4.29□□□□□ -1.72
PDCD6-209ENST00000512466 LCE2AQ5TA79 106 aaPredicted RBP4.28□□□□□ -1.72
PDCD6-209ENST00000512466 SPRR2GQ9BYE4 73 aa4.27□□□□□ -1.73
PDCD6-209ENST00000512466 KRTAP23-1A1A580 65 aa4.22□□□□□ -1.73
PDCD6-209ENST00000512466 FSIP2Q5CZC0 6907 aa4.2□□□□□ -1.74
PDCD6-209ENST00000512466 SPRR5A0A1B0GTR4 108 aa4.18□□□□□ -1.74
PDCD6-209ENST00000512466 KRTAP9-3Q9BYQ3 159 aa4.16□□□□□ -1.74
PDCD6-209ENST00000512466 USH2AO75445 5202 aa4.15□□□□□ -1.74
PDCD6-209ENST00000512466 KRTAP10-7P60409 375 aaPredicted RBP4.14□□□□□ -1.75
PDCD6-209ENST00000512466 LCE2BO14633 110 aa4.13□□□□□ -1.75
PDCD6-209ENST00000512466 KMT2DO14686 5537 aa4.12□□□□□ -1.75
PDCD6-209ENST00000512466 KRTAP8-1Q8IUC2 63 aa4.1□□□□□ -1.75
PDCD6-209ENST00000512466 KRTAP19-8Q3LI54 63 aa4.09□□□□□ -1.75
PDCD6-209ENST00000512466 MT1XP80297 61 aa4.09□□□□□ -1.76
PDCD6-209ENST00000512466 KRTAP10-5P60370 271 aa4.08□□□□□ -1.76
PDCD6-209ENST00000512466 MT1BP07438 61 aa4.07□□□□□ -1.76
PDCD6-209ENST00000512466 KRTAP19-5Q3LI72 72 aa4.03□□□□□ -1.76
PDCD6-209ENST00000512466 CRCT1Q9UGL9 99 aa4.01□□□□□ -1.77
PDCD6-209ENST00000512466 KRTAP4-8A0A0G2JLE6 195 aa4□□□□□ -1.77
PDCD6-209ENST00000512466 KRTAP4-8Q9BYQ9 185 aa4□□□□□ -1.77
PDCD6-209ENST00000512466 OBSCNQ5VST9 7968 aa3.95□□□□□ -1.78
PDCD6-209ENST00000512466 KRTAP9-2Q9BYQ4 174 aa3.93□□□□□ -1.78
PDCD6-209ENST00000512466 KRTAP4-7Q9BYR0 210 aa3.91□□□□□ -1.78
PDCD6-209ENST00000512466 LCE3CQ5T5A8 94 aa3.9□□□□□ -1.78
PDCD6-209ENST00000512466 DSTQ03001 7570 aaKnown RBP3.89□□□□□ -1.79
PDCD6-209ENST00000512466 SYNE1Q8NF91 8797 aaKnown RBP3.87□□□□□ -1.79
PDCD6-209ENST00000512466 KRTAP19-6Q3LI70 58 aa3.82□□□□□ -1.8
PDCD6-209ENST00000512466 FCGBPQ9Y6R7 5405 aaPredicted RBP3.82□□□□□ -1.8
PDCD6-209ENST00000512466 KRTAP9-6A0A140TA67 174 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms