RNA–Protein interactions for RNA: ENST00000510871.5

RBM47-207, Transcript of RNA binding motif protein 47, humanhuman

TSL 1 (best)

Gene RBM47, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-207ENST00000510871 INE1O15225 51 aa6.46□□□□□ -1.37
RBM47-207ENST00000510871 DNAH5Q8TE73 4624 aa6.46□□□□□ -1.38
RBM47-207ENST00000510871 DNAH11Q96DT5 4516 aa6.45□□□□□ -1.38
RBM47-207ENST00000510871 DNAH17Q9UFH2 4485 aa6.45□□□□□ -1.38
RBM47-207ENST00000510871 KRTAP3-3Q9BYR6 98 aa6.41□□□□□ -1.38
RBM47-207ENST00000510871 STARD9Q9P2P6 4700 aa6.4□□□□□ -1.39
RBM47-207ENST00000510871 DNHD1Q96M86 4753 aa6.38□□□□□ -1.39
RBM47-207ENST00000510871 KRTAP4-5Q9BYR2 181 aa6.38□□□□□ -1.39
RBM47-207ENST00000510871 KRTAP3-2Q9BYR7 98 aa6.37□□□□□ -1.39
RBM47-207ENST00000510871 ANK2Q01484 3957 aa6.33□□□□□ -1.4
RBM47-207ENST00000510871 DNAH3Q8TD57 4116 aa6.33□□□□□ -1.4
RBM47-207ENST00000510871 DNAH2Q9P225 4427 aa6.29□□□□□ -1.4
RBM47-207ENST00000510871 PRKDCP78527 4128 aaKnown RBP6.28□□□□□ -1.4
RBM47-207ENST00000510871 DYNC1H1Q14204 4646 aaKnown RBP6.25□□□□□ -1.41
RBM47-207ENST00000510871 CMYA5Q8N3K9 4069 aa6.24□□□□□ -1.41
RBM47-207ENST00000510871 DNAH8Q96JB1 4490 aa6.23□□□□□ -1.41
RBM47-207ENST00000510871 LRP1BQ9NZR2 4599 aa6.22□□□□□ -1.41
RBM47-207ENST00000510871 DYNC2H1Q8NCM8 4307 aaKnown RBP6.18□□□□□ -1.42
RBM47-207ENST00000510871 KMT2AQ03164 3969 aa6.17□□□□□ -1.42
RBM47-207ENST00000510871 FAT1Q14517 4588 aa6.17□□□□□ -1.42
RBM47-207ENST00000510871 KRTAP23-1A1A580 65 aa6.11□□□□□ -1.43
RBM47-207ENST00000510871 SACSQ9NZJ4 4579 aa6.1□□□□□ -1.43
RBM47-207ENST00000510871 FAT2Q9NYQ8 4349 aa6.08□□□□□ -1.44
RBM47-207ENST00000510871 LYSTQ99698 3801 aa6.01□□□□□ -1.45
RBM47-207ENST00000510871 VPS13BQ7Z7G8 4022 aa6.01□□□□□ -1.45
RBM47-207ENST00000510871 LORP23490 312 aaPredicted RBP6□□□□□ -1.45
RBM47-207ENST00000510871 DNAH6Q9C0G6 4158 aa5.98□□□□□ -1.45
RBM47-207ENST00000510871 HECTD4Q9Y4D8 3996 aa5.97□□□□□ -1.45
RBM47-207ENST00000510871 DNAH7Q8WXX0 4024 aa5.94□□□□□ -1.46
RBM47-207ENST00000510871 RYR1P21817 5038 aa5.94□□□□□ -1.46
RBM47-207ENST00000510871 FRAS1Q86XX4 4008 aa5.94□□□□□ -1.46
RBM47-207ENST00000510871 KRTAP4-1Q9BYQ7 146 aa5.93□□□□□ -1.46
RBM47-207ENST00000510871 APOBP04114 4563 aaKnown RBP5.88□□□□□ -1.47
RBM47-207ENST00000510871 KIAA1109Q2LD37 5005 aa5.8□□□□□ -1.48
RBM47-207ENST00000510871 KRTAP17-1Q9BYP8 105 aa5.8□□□□□ -1.48
RBM47-207ENST00000510871 HYDINQ4G0P3 5121 aa5.79□□□□□ -1.48
RBM47-207ENST00000510871 RYR3Q15413 4870 aa5.77□□□□□ -1.49
RBM47-207ENST00000510871 KRTAP10-12P60413 245 aa5.77□□□□□ -1.49
RBM47-207ENST00000510871 MYCBP2O75592 4640 aa5.77□□□□□ -1.49
RBM47-207ENST00000510871 RYR2Q92736 4967 aa5.75□□□□□ -1.49
RBM47-207ENST00000510871 LRP1Q07954 4544 aaKnown RBP5.74□□□□□ -1.49
RBM47-207ENST00000510871 FAT3Q8TDW7 4589 aa5.68□□□□□ -1.5
RBM47-207ENST00000510871 LCE3AQ5TA76 89 aa5.68□□□□□ -1.5
RBM47-207ENST00000510871 MT1HP80294 61 aa5.65□□□□□ -1.51
RBM47-207ENST00000510871 PKHD1P08F94 4074 aa5.63□□□□□ -1.51
RBM47-207ENST00000510871 KRTAP12-3P60328 96 aa5.63□□□□□ -1.51
RBM47-207ENST00000510871 PKD1P98161 4303 aa5.6□□□□□ -1.51
RBM47-207ENST00000510871 MT2AP02795 61 aa5.57□□□□□ -1.52
RBM47-207ENST00000510871 HSPG2P98160 4391 aa5.56□□□□□ -1.52
RBM47-207ENST00000510871 SPRR2GQ9BYE4 73 aa5.55□□□□□ -1.52
RBM47-207ENST00000510871 MT1FP04733 61 aa5.49□□□□□ -1.53
RBM47-207ENST00000510871 HERC2O95714 4834 aa5.44□□□□□ -1.54
RBM47-207ENST00000510871 LRP2P98164 4655 aa5.43□□□□□ -1.54
RBM47-207ENST00000510871 KMT2CQ8NEZ4 4911 aaKnown RBP5.39□□□□□ -1.55
RBM47-207ENST00000510871 PKHD1L1Q86WI1 4243 aa5.39□□□□□ -1.55
RBM47-207ENST00000510871 CRCT1Q9UGL9 99 aa5.38□□□□□ -1.55
RBM47-207ENST00000510871 TNXBP22105 4242 aa5.34□□□□□ -1.55
RBM47-207ENST00000510871 BIRC6Q9NR09 4857 aa5.33□□□□□ -1.56
RBM47-207ENST00000510871 KRTAP19-1Q8IUB9 90 aa5.31□□□□□ -1.56
RBM47-207ENST00000510871 LPAP08519 4548 aa5.3□□□□□ -1.56
RBM47-207ENST00000510871 KRTAP8-1Q8IUC2 63 aa5.24□□□□□ -1.57
RBM47-207ENST00000510871 KRTAP19-8Q3LI54 63 aa5.22□□□□□ -1.57
RBM47-207ENST00000510871 LCE2CQ5TA81 110 aa5.21□□□□□ -1.58
RBM47-207ENST00000510871 SPRR5A0A1B0GTR4 108 aa5.21□□□□□ -1.58
RBM47-207ENST00000510871 HERC1Q15751 4861 aa5.2□□□□□ -1.58
RBM47-207ENST00000510871 EPPK1P58107 5090 aaKnown RBP5.17□□□□□ -1.58
RBM47-207ENST00000510871 KRTAP19-5Q3LI72 72 aa5.16□□□□□ -1.58
RBM47-207ENST00000510871 KRTAP9-8Q9BYQ0 159 aa5.16□□□□□ -1.58
RBM47-207ENST00000510871 KRTAP19-2Q3LHN2 52 aa5.12□□□□□ -1.59
RBM47-207ENST00000510871 ABCA13Q86UQ4 5058 aa5.11□□□□□ -1.59
RBM47-207ENST00000510871 KRTAP10-7P60409 375 aaPredicted RBP5.11□□□□□ -1.59
RBM47-207ENST00000510871 PCLOQ9Y6V0 5065 aa5.1□□□□□ -1.59
RBM47-207ENST00000510871 MT1BP07438 61 aa5.1□□□□□ -1.59
RBM47-207ENST00000510871 MT1XP80297 61 aa5.1□□□□□ -1.59
RBM47-207ENST00000510871 KRTAP10-5P60370 271 aa5.06□□□□□ -1.6
RBM47-207ENST00000510871 LCE3CQ5T5A8 94 aa5.04□□□□□ -1.6
RBM47-207ENST00000510871 MUC17Q685J3 4493 aa5.03□□□□□ -1.6
RBM47-207ENST00000510871 KRTAP9-3Q9BYQ3 159 aa5□□□□□ -1.61
RBM47-207ENST00000510871 FLGP20930 4061 aaPredicted RBP5□□□□□ -1.61
RBM47-207ENST00000510871 SPRR2FQ96RM1 72 aa4.9□□□□□ -1.63
RBM47-207ENST00000510871 KRTAP19-4Q3LI73 84 aa4.87□□□□□ -1.63
RBM47-207ENST00000510871 KRTAP4-8A0A0G2JLE6 195 aa4.84□□□□□ -1.64
RBM47-207ENST00000510871 KRTAP4-8Q9BYQ9 185 aa4.84□□□□□ -1.64
RBM47-207ENST00000510871 LCE2BO14633 110 aa4.79□□□□□ -1.64
RBM47-207ENST00000510871 RNF213Q63HN8 5207 aa4.79□□□□□ -1.64
RBM47-207ENST00000510871 FAT4Q6V0I7 4981 aa4.75□□□□□ -1.65
RBM47-207ENST00000510871 HMCN2Q8NDA2 5059 aa4.7□□□□□ -1.66
RBM47-207ENST00000510871 KRTAP12-4P60329 112 aa4.66□□□□□ -1.66
RBM47-207ENST00000510871 MT1GP13640 62 aa4.62□□□□□ -1.67
RBM47-207ENST00000510871 MUC2Q02817 5179 aa4.61□□□□□ -1.67
RBM47-207ENST00000510871 UBR4Q5T4S7 5183 aa4.58□□□□□ -1.68
RBM47-207ENST00000510871 KRTAP4-7Q9BYR0 210 aa4.56□□□□□ -1.68
RBM47-207ENST00000510871 SPRR2EP22531 72 aa4.55□□□□□ -1.68
RBM47-207ENST00000510871 SPRR2BP35325 72 aa4.55□□□□□ -1.68
RBM47-207ENST00000510871 SPRR2AP35326 72 aa4.55□□□□□ -1.68
RBM47-207ENST00000510871 MT1LQ93083 61 aa4.54□□□□□ -1.68
RBM47-207ENST00000510871 LCE2AQ5TA79 106 aaPredicted RBP4.53□□□□□ -1.68
RBM47-207ENST00000510871 MT1EP04732 61 aa4.53□□□□□ -1.68
RBM47-207ENST00000510871 LCE3BQ5TA77 95 aa4.49□□□□□ -1.69
RBM47-207ENST00000510871 KRTAP19-3Q7Z4W3 81 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms