RNA–Protein interactions for RNA: ENST00000510290.5

SRPK1-211, Transcript of SRSF protein kinase 1, humanhuman

TSL 3

Gene SRPK1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-211ENST00000510290 USP24Q9UPU5 2620 aa0.91□□□□□ -2.26
SRPK1-211ENST00000510290 CEP250Q9BV73 2442 aa0.9□□□□□ -2.26
SRPK1-211ENST00000510290 NIPBLQ6KC79 2804 aaeCLIP0.9□□□□□ -2.26
SRPK1-211ENST00000510290 FLGP20930 4061 aaPredicted RBP0.9□□□□□ -2.27
SRPK1-211ENST00000510290 GCN1Q92616 2671 aaKnown RBP0.9□□□□□ -2.27
SRPK1-211ENST00000510290 LAMA1P25391 3075 aa0.9□□□□□ -2.27
SRPK1-211ENST00000510290 NCOR2Q9Y618 2525 aa0.89□□□□□ -2.27
SRPK1-211ENST00000510290 FLNCQ14315 2725 aa0.89□□□□□ -2.27
SRPK1-211ENST00000510290 TACC2O95359 2948 aa0.89□□□□□ -2.27
SRPK1-211ENST00000510290 HTN3P15516 51 aa0.89□□□□□ -2.27
SRPK1-211ENST00000510290 HECTD4Q9Y4D8 3996 aa0.89□□□□□ -2.27
SRPK1-211ENST00000510290 BDP1A6H8Y1 2624 aa0.88□□□□□ -2.27
SRPK1-211ENST00000510290 EP400Q96L91 3159 aa0.88□□□□□ -2.27
SRPK1-211ENST00000510290 FAT3Q8TDW7 4589 aa0.88□□□□□ -2.27
SRPK1-211ENST00000510290 USP34Q70CQ2 3546 aa0.88□□□□□ -2.27
SRPK1-211ENST00000510290 LAMA2P24043 3122 aaKnown RBP0.88□□□□□ -2.27
SRPK1-211ENST00000510290 CSMD2Q7Z408 3487 aa0.88□□□□□ -2.27
SRPK1-211ENST00000510290 ASPMQ8IZT6 3477 aa0.88□□□□□ -2.27
SRPK1-211ENST00000510290 ANK3Q12955 4377 aaKnown RBP0.88□□□□□ -2.27
SRPK1-211ENST00000510290 PTPN13Q12923 2485 aa0.88□□□□□ -2.27
SRPK1-211ENST00000510290 FAT2Q9NYQ8 4349 aa0.88□□□□□ -2.27
SRPK1-211ENST00000510290 AHNAKQ09666 5890 aaKnown RBP0.87□□□□□ -2.27
SRPK1-211ENST00000510290 CACNA1AO00555 2505 aa0.87□□□□□ -2.27
SRPK1-211ENST00000510290 UTP20O75691 2785 aaKnown RBP0.87□□□□□ -2.27
SRPK1-211ENST00000510290 SETXQ7Z333 2677 aaKnown RBP0.87□□□□□ -2.27
SRPK1-211ENST00000510290 KRTAP2-3P0C7H8 128 aa0.87□□□□□ -2.27
SRPK1-211ENST00000510290 KRTAP2-4Q9BYR9 128 aa0.87□□□□□ -2.27
SRPK1-211ENST00000510290 KRTAP2-1Q9BYU5 128 aa0.87□□□□□ -2.27
SRPK1-211ENST00000510290 DNAH1Q9P2D7 4330 aa0.87□□□□□ -2.27
SRPK1-211ENST00000510290 MXRA5Q9NR99 2828 aa0.87□□□□□ -2.27
SRPK1-211ENST00000510290 ZANQ9Y493 2812 aa0.87□□□□□ -2.27
SRPK1-211ENST00000510290 PKD1P98161 4303 aa0.86□□□□□ -2.27
SRPK1-211ENST00000510290 TENM3Q9P273 2699 aa0.86□□□□□ -2.27
SRPK1-211ENST00000510290 HSPG2P98160 4391 aa0.86□□□□□ -2.27
SRPK1-211ENST00000510290 PKD1L1Q8TDX9 2849 aa0.86□□□□□ -2.27
SRPK1-211ENST00000510290 DNAH9Q9NYC9 4486 aa0.86□□□□□ -2.27
SRPK1-211ENST00000510290 RIF1Q5UIP0 2472 aaKnown RBP0.86□□□□□ -2.27
SRPK1-211ENST00000510290 RPS29P62273 56 aaKnown RBP0.86□□□□□ -2.27
SRPK1-211ENST00000510290 LAMA3Q16787 3333 aa0.86□□□□□ -2.27
SRPK1-211ENST00000510290 HUWE1Q7Z6Z7 4374 aaKnown RBP0.86□□□□□ -2.27
SRPK1-211ENST00000510290 HRNRQ86YZ3 2850 aaPredicted RBP0.86□□□□□ -2.27
SRPK1-211ENST00000510290 APOBP04114 4563 aaKnown RBP0.86□□□□□ -2.27
SRPK1-211ENST00000510290 TRRAPQ9Y4A5 3859 aa0.86□□□□□ -2.27
SRPK1-211ENST00000510290 LRRK2Q5S007 2527 aa0.85□□□□□ -2.27
SRPK1-211ENST00000510290 DNAH6Q9C0G6 4158 aa0.85□□□□□ -2.27
SRPK1-211ENST00000510290 CMYA5Q8N3K9 4069 aa0.84□□□□□ -2.27
SRPK1-211ENST00000510290 NBEAL2Q6ZNJ1 2754 aa0.84□□□□□ -2.27
SRPK1-211ENST00000510290 DNAH17Q9UFH2 4485 aa0.84□□□□□ -2.28
SRPK1-211ENST00000510290 CUBNO60494 3623 aa0.84□□□□□ -2.28
SRPK1-211ENST00000510290 UNC80Q8N2C7 3258 aa0.84□□□□□ -2.28
SRPK1-211ENST00000510290 VCANP13611 3396 aa0.83□□□□□ -2.28
SRPK1-211ENST00000510290 DNAH5Q8TE73 4624 aa0.83□□□□□ -2.28
SRPK1-211ENST00000510290 SONP18583 2426 aaKnown RBP0.83□□□□□ -2.28
SRPK1-211ENST00000510290 TEP1Q99973 2627 aaKnown RBP0.83□□□□□ -2.28
SRPK1-211ENST00000510290 DEFB4AO15263 64 aa0.83□□□□□ -2.28
SRPK1-211ENST00000510290 SMR3AQ99954 134 aa0.83□□□□□ -2.28
SRPK1-211ENST00000510290 CFAP46Q8IYW2 2715 aa0.83□□□□□ -2.28
SRPK1-211ENST00000510290 ANKHD1Q8IWZ3 2542 aaKnown RBP0.83□□□□□ -2.28
SRPK1-211ENST00000510290 TEX15Q9BXT5 2789 aa0.83□□□□□ -2.28
SRPK1-211ENST00000510290 PLECQ15149 4684 aaKnown RBP0.83□□□□□ -2.28
SRPK1-211ENST00000510290 HIVEP3Q5T1R4 2406 aa0.83□□□□□ -2.28
SRPK1-211ENST00000510290 AHNAK2Q8IVF2 5795 aa0.82□□□□□ -2.28
SRPK1-211ENST00000510290 TGP01266 2768 aa0.82□□□□□ -2.28
SRPK1-211ENST00000510290 SPG11Q96JI7 2443 aa0.82□□□□□ -2.28
SRPK1-211ENST00000510290 KRTAP8-1Q8IUC2 63 aa0.82□□□□□ -2.28
SRPK1-211ENST00000510290 ANKRD11Q6UB99 2663 aaPredicted RBP0.82□□□□□ -2.28
SRPK1-211ENST00000510290 BRCA2P51587 3418 aa0.82□□□□□ -2.28
SRPK1-211ENST00000510290 HIVEP1P15822 2718 aa0.82□□□□□ -2.28
SRPK1-211ENST00000510290 EPG5Q9HCE0 2579 aa0.82□□□□□ -2.28
SRPK1-211ENST00000510290 SVEP1Q4LDE5 3571 aa0.81□□□□□ -2.28
SRPK1-211ENST00000510290 ADGRG4Q8IZF6 3080 aa0.81□□□□□ -2.28
SRPK1-211ENST00000510290 TNXBP22105 4242 aa0.81□□□□□ -2.28
SRPK1-211ENST00000510290 MUC5BQ9HC84 5762 aaPredicted RBP0.81□□□□□ -2.28
SRPK1-211ENST00000510290 MYO15AQ9UKN7 3530 aa0.81□□□□□ -2.28
SRPK1-211ENST00000510290 USP9XQ93008 2570 aaPredicted RBP0.8□□□□□ -2.28
SRPK1-211ENST00000510290 PRM1P04553 51 aa0.8□□□□□ -2.28
SRPK1-211ENST00000510290 FAM186AA6NE01 2351 aa0.8□□□□□ -2.28
SRPK1-211ENST00000510290 WDFY3Q8IZQ1 3526 aa0.8□□□□□ -2.28
SRPK1-211ENST00000510290 LRP1Q07954 4544 aaKnown RBP0.8□□□□□ -2.28
SRPK1-211ENST00000510290 NSD1Q96L73 2696 aaPredicted RBP0.8□□□□□ -2.28
SRPK1-211ENST00000510290 CENPEQ02224 2701 aa0.8□□□□□ -2.28
SRPK1-211ENST00000510290 ITPR2Q14571 2701 aa0.8□□□□□ -2.28
SRPK1-211ENST00000510290 U3KQA8 63 aa0.79□□□□□ -2.28
SRPK1-211ENST00000510290 STAB1Q9NY15 2570 aa0.79□□□□□ -2.28
SRPK1-211ENST00000510290 VPS13CQ709C8 3753 aa0.79□□□□□ -2.28
SRPK1-211ENST00000510290 CHD8Q9HCK8 2581 aa0.78□□□□□ -2.28
SRPK1-211ENST00000510290 DNAH14Q0VDD8 3507 aa0.78□□□□□ -2.28
SRPK1-211ENST00000510290 MTORP42345 2549 aa0.78□□□□□ -2.28
SRPK1-211ENST00000510290 NBEAL1Q6ZS30 2694 aa0.78□□□□□ -2.29
SRPK1-211ENST00000510290 LPAP08519 4548 aa0.77□□□□□ -2.29
SRPK1-211ENST00000510290 FAT1Q14517 4588 aa0.77□□□□□ -2.29
SRPK1-211ENST00000510290 PKHD1P08F94 4074 aa0.77□□□□□ -2.29
SRPK1-211ENST00000510290 EYSQ5T1H1 3165 aa0.76□□□□□ -2.29
SRPK1-211ENST00000510290 ACACBO00763 2458 aa0.76□□□□□ -2.29
SRPK1-211ENST00000510290 DYNC1H1Q14204 4646 aaKnown RBP0.76□□□□□ -2.29
SRPK1-211ENST00000510290 MYO18BQ8IUG5 2567 aa0.75□□□□□ -2.29
SRPK1-211ENST00000510290 ACANP16112 2415 aa0.75□□□□□ -2.29
SRPK1-211ENST00000510290 UNC79Q9P2D8 2635 aa0.74□□□□□ -2.29
SRPK1-211ENST00000510290 SMR3BP02814 79 aaPredicted RBP0.74□□□□□ -2.29
SRPK1-211ENST00000510290 FLNAP21333 2647 aaKnown RBP0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms