RNA–Protein interactions for RNA: ENST00000508579.5

CAST-222, Transcript of calpastatin, humanhuman

TSL 2 BASIC

Gene CAST, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-222ENST00000508579 SONP18583 2426 aaKnown RBP3.94□□□□□ -1.78
CAST-222ENST00000508579 FLNAP21333 2647 aaKnown RBP3.93□□□□□ -1.78
CAST-222ENST00000508579 ANK2Q01484 3957 aa3.93□□□□□ -1.78
CAST-222ENST00000508579 Q5VSD8 79 aa3.92□□□□□ -1.78
CAST-222ENST00000508579 KRTAP13-2Q52LG2 175 aa3.91□□□□□ -1.78
CAST-222ENST00000508579 SMR3AQ99954 134 aa3.89□□□□□ -1.79
CAST-222ENST00000508579 RPS29P62273 56 aaKnown RBP3.88□□□□□ -1.79
CAST-222ENST00000508579 CUBNO60494 3623 aa3.87□□□□□ -1.79
CAST-222ENST00000508579 A0A1B0GVY2 172 aa3.86□□□□□ -1.79
CAST-222ENST00000508579 M0QZ58 72 aa3.86□□□□□ -1.79
CAST-222ENST00000508579 PKD1L1Q8TDX9 2849 aa3.85□□□□□ -1.79
CAST-222ENST00000508579 NOTCH1P46531 2555 aa3.84□□□□□ -1.79
CAST-222ENST00000508579 TGP01266 2768 aa3.83□□□□□ -1.8
CAST-222ENST00000508579 VWFP04275 2813 aa3.82□□□□□ -1.8
CAST-222ENST00000508579 MEGF8Q7Z7M0 2845 aa3.79□□□□□ -1.8
CAST-222ENST00000508579 RYR3Q15413 4870 aa3.77□□□□□ -1.81
CAST-222ENST00000508579 DNAH3Q8TD57 4116 aa3.77□□□□□ -1.81
CAST-222ENST00000508579 SRRM2Q9UQ35 2752 aaKnown RBP3.76□□□□□ -1.81
CAST-222ENST00000508579 KMT2CQ8NEZ4 4911 aaKnown RBP3.76□□□□□ -1.81
CAST-222ENST00000508579 MGAM2Q2M2H8 2515 aa3.76□□□□□ -1.81
CAST-222ENST00000508579 PRKDCP78527 4128 aaKnown RBP3.75□□□□□ -1.81
CAST-222ENST00000508579 TENM3Q9P273 2699 aa3.75□□□□□ -1.81
CAST-222ENST00000508579 DYNC2H1Q8NCM8 4307 aaKnown RBP3.72□□□□□ -1.81
CAST-222ENST00000508579 BIRC6Q9NR09 4857 aa3.72□□□□□ -1.81
CAST-222ENST00000508579 KRTAP1-4P0C5Y4 121 aa3.71□□□□□ -1.82
CAST-222ENST00000508579 TENM1Q9UKZ4 2725 aa3.7□□□□□ -1.82
CAST-222ENST00000508579 TRRAPQ9Y4A5 3859 aa3.7□□□□□ -1.82
CAST-222ENST00000508579 VPS13DQ5THJ4 4388 aa3.68□□□□□ -1.82
CAST-222ENST00000508579 LYSTQ99698 3801 aa3.68□□□□□ -1.82
CAST-222ENST00000508579 DNAH8Q96JB1 4490 aa3.67□□□□□ -1.82
CAST-222ENST00000508579 DNAH10Q8IVF4 4471 aa3.67□□□□□ -1.82
CAST-222ENST00000508579 HUWE1Q7Z6Z7 4374 aaKnown RBP3.66□□□□□ -1.82
CAST-222ENST00000508579 CMYA5Q8N3K9 4069 aa3.65□□□□□ -1.82
CAST-222ENST00000508579 DNAH9Q9NYC9 4486 aa3.64□□□□□ -1.83
CAST-222ENST00000508579 EPPK1P58107 5090 aaKnown RBP3.64□□□□□ -1.83
CAST-222ENST00000508579 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
CAST-222ENST00000508579 DMBT1Q9UGM3 2413 aaPredicted RBP3.61□□□□□ -1.83
CAST-222ENST00000508579 DNAH17Q9UFH2 4485 aa3.61□□□□□ -1.83
CAST-222ENST00000508579 HECTD4Q9Y4D8 3996 aa3.59□□□□□ -1.83
CAST-222ENST00000508579 FRAS1Q86XX4 4008 aa3.59□□□□□ -1.83
CAST-222ENST00000508579 DNAH7Q8WXX0 4024 aa3.57□□□□□ -1.84
CAST-222ENST00000508579 KRTAP10-7P60409 375 aaPredicted RBP3.57□□□□□ -1.84
CAST-222ENST00000508579 RYR2Q92736 4967 aa3.57□□□□□ -1.84
CAST-222ENST00000508579 RYR1P21817 5038 aa3.56□□□□□ -1.84
CAST-222ENST00000508579 UBR4Q5T4S7 5183 aa3.56□□□□□ -1.84
CAST-222ENST00000508579 KRTAP2-2Q9BYT5 123 aa3.55□□□□□ -1.84
CAST-222ENST00000508579 PCLOQ9Y6V0 5065 aa3.54□□□□□ -1.84
CAST-222ENST00000508579 SACSQ9NZJ4 4579 aa3.54□□□□□ -1.84
CAST-222ENST00000508579 HYDINQ4G0P3 5121 aa3.53□□□□□ -1.84
CAST-222ENST00000508579 C9orf92A6NGG3 77 aa3.53□□□□□ -1.84
CAST-222ENST00000508579 KRTAP10-10P60014 251 aa3.53□□□□□ -1.84
CAST-222ENST00000508579 KRTAP10-1P60331 282 aa3.53□□□□□ -1.84
CAST-222ENST00000508579 COL7A1Q02388 2944 aa3.52□□□□□ -1.85
CAST-222ENST00000508579 HERC2O95714 4834 aa3.51□□□□□ -1.85
CAST-222ENST00000508579 STAB2Q8WWQ8 2551 aa3.51□□□□□ -1.85
CAST-222ENST00000508579 CSMD3Q7Z407 3707 aa3.51□□□□□ -1.85
CAST-222ENST00000508579 DNAH11Q96DT5 4516 aa3.49□□□□□ -1.85
CAST-222ENST00000508579 DNAH6Q9C0G6 4158 aa3.49□□□□□ -1.85
CAST-222ENST00000508579 DNAH2Q9P225 4427 aa3.49□□□□□ -1.85
CAST-222ENST00000508579 PLECQ15149 4684 aaKnown RBP3.49□□□□□ -1.85
CAST-222ENST00000508579 TNP1P09430 55 aa3.45□□□□□ -1.86
CAST-222ENST00000508579 KRTAP5-9P26371 169 aa3.41□□□□□ -1.86
CAST-222ENST00000508579 KIAA1109Q2LD37 5005 aa3.4□□□□□ -1.87
CAST-222ENST00000508579 MYCBP2O75592 4640 aa3.38□□□□□ -1.87
CAST-222ENST00000508579 DNAH5Q8TE73 4624 aa3.37□□□□□ -1.87
CAST-222ENST00000508579 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
CAST-222ENST00000508579 STARD9Q9P2P6 4700 aa3.34□□□□□ -1.87
CAST-222ENST00000508579 LRP1BQ9NZR2 4599 aa3.34□□□□□ -1.87
CAST-222ENST00000508579 KRTAP5-4Q6L8H1 288 aa3.34□□□□□ -1.87
CAST-222ENST00000508579 KMT2AQ03164 3969 aa3.34□□□□□ -1.87
CAST-222ENST00000508579 PKHD1L1Q86WI1 4243 aa3.33□□□□□ -1.88
CAST-222ENST00000508579 ABCA13Q86UQ4 5058 aa3.32□□□□□ -1.88
CAST-222ENST00000508579 KRTAP10-4P60372 401 aaPredicted RBP3.32□□□□□ -1.88
CAST-222ENST00000508579 VPS13BQ7Z7G8 4022 aa3.3□□□□□ -1.88
CAST-222ENST00000508579 PKD1P98161 4303 aa3.28□□□□□ -1.88
CAST-222ENST00000508579 LCE1AQ5T7P2 110 aa3.28□□□□□ -1.89
CAST-222ENST00000508579 PKHD1P08F94 4074 aa3.27□□□□□ -1.89
CAST-222ENST00000508579 HERC1Q15751 4861 aa3.27□□□□□ -1.89
CAST-222ENST00000508579 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
CAST-222ENST00000508579 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
CAST-222ENST00000508579 APOBP04114 4563 aaKnown RBP3.23□□□□□ -1.89
CAST-222ENST00000508579 SMR3BP02814 79 aaPredicted RBP3.22□□□□□ -1.89
CAST-222ENST00000508579 DYNC1H1Q14204 4646 aaKnown RBP3.21□□□□□ -1.9
CAST-222ENST00000508579 LRP1Q07954 4544 aaKnown RBP3.2□□□□□ -1.9
CAST-222ENST00000508579 FAT2Q9NYQ8 4349 aa3.2□□□□□ -1.9
CAST-222ENST00000508579 TNXBP22105 4242 aa3.18□□□□□ -1.9
CAST-222ENST00000508579 FAT3Q8TDW7 4589 aa3.15□□□□□ -1.9
CAST-222ENST00000508579 HSPG2P98160 4391 aa3.15□□□□□ -1.91
CAST-222ENST00000508579 KRTAP6-3Q3LI67 103 aa3.13□□□□□ -1.91
CAST-222ENST00000508579 FAT1Q14517 4588 aa3.12□□□□□ -1.91
CAST-222ENST00000508579 MUC2Q02817 5179 aa3.11□□□□□ -1.91
CAST-222ENST00000508579 MT3P25713 68 aa3.11□□□□□ -1.91
CAST-222ENST00000508579 KRTAP12-4P60329 112 aa3.08□□□□□ -1.92
CAST-222ENST00000508579 KRTAP10-12P60413 245 aa3.05□□□□□ -1.92
CAST-222ENST00000508579 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
CAST-222ENST00000508579 GPR98Q8WXG9 6306 aa3.04□□□□□ -1.92
CAST-222ENST00000508579 HMCN2Q8NDA2 5059 aa3.03□□□□□ -1.92
CAST-222ENST00000508579 M0R2T5 61 aa3.02□□□□□ -1.93
CAST-222ENST00000508579 KRTAP2-3P0C7H8 128 aa3.02□□□□□ -1.93
CAST-222ENST00000508579 KRTAP8-1Q8IUC2 63 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms