RNA–Protein interactions for RNA: ENST00000508457.1

C4orf46-202, Transcript of chromosome 4 open reading frame 46, humanhuman

TSL 5 BASIC

Gene C4orf46, Length 3,358 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46-202ENST00000508457 DYNC1H1Q14204 4646 aaKnown RBP4.75□□□□□ -1.65
C4orf46-202ENST00000508457 FAT2Q9NYQ8 4349 aa4.72□□□□□ -1.65
C4orf46-202ENST00000508457 KIAA1109Q2LD37 5005 aa4.71□□□□□ -1.65
C4orf46-202ENST00000508457 HERC2O95714 4834 aa4.68□□□□□ -1.66
C4orf46-202ENST00000508457 EPPK1P58107 5090 aaKnown RBP4.67□□□□□ -1.66
C4orf46-202ENST00000508457 VPS13BQ7Z7G8 4022 aa4.65□□□□□ -1.66
C4orf46-202ENST00000508457 PKD1P98161 4303 aa4.65□□□□□ -1.67
C4orf46-202ENST00000508457 APOBP04114 4563 aaKnown RBP4.64□□□□□ -1.67
C4orf46-202ENST00000508457 PLAC4Q8WY50 150 aa4.63□□□□□ -1.67
C4orf46-202ENST00000508457 KRTAP13-1Q8IUC0 172 aa4.62□□□□□ -1.67
C4orf46-202ENST00000508457 KRTAP13-4Q3LI77 160 aa4.62□□□□□ -1.67
C4orf46-202ENST00000508457 A0A1B0GVY2 172 aa4.61□□□□□ -1.67
C4orf46-202ENST00000508457 LRP1Q07954 4544 aaKnown RBP4.61□□□□□ -1.67
C4orf46-202ENST00000508457 CAMK2N1Q7Z7J9 78 aa4.61□□□□□ -1.67
C4orf46-202ENST00000508457 S4R3F8 94 aa4.59□□□□□ -1.68
C4orf46-202ENST00000508457 MYCBP2O75592 4640 aa4.58□□□□□ -1.68
C4orf46-202ENST00000508457 RYR1P21817 5038 aa4.57□□□□□ -1.68
C4orf46-202ENST00000508457 KRTAP17-1Q9BYP8 105 aa4.56□□□□□ -1.68
C4orf46-202ENST00000508457 Q5VSD8 79 aa4.54□□□□□ -1.68
C4orf46-202ENST00000508457 KRTAP12-2P59991 146 aa4.54□□□□□ -1.68
C4orf46-202ENST00000508457 KRTAP13-2Q52LG2 175 aa4.54□□□□□ -1.68
C4orf46-202ENST00000508457 KRTAP3-1Q9BYR8 98 aa4.53□□□□□ -1.68
C4orf46-202ENST00000508457 FAT3Q8TDW7 4589 aa4.51□□□□□ -1.69
C4orf46-202ENST00000508457 C9orf92A6NGG3 77 aa4.49□□□□□ -1.69
C4orf46-202ENST00000508457 KRTAP4-5Q9BYR2 181 aa4.49□□□□□ -1.69
C4orf46-202ENST00000508457 KRTAP1-4P0C5Y4 121 aa4.48□□□□□ -1.69
C4orf46-202ENST00000508457 KRTAP10-8P60410 259 aa4.48□□□□□ -1.69
C4orf46-202ENST00000508457 HSPG2P98160 4391 aa4.48□□□□□ -1.69
C4orf46-202ENST00000508457 XP32Q5T750 250 aa4.47□□□□□ -1.69
C4orf46-202ENST00000508457 KRTAP10-6P60371 365 aaPredicted RBP4.45□□□□□ -1.7
C4orf46-202ENST00000508457 KRTAP3-2Q9BYR7 98 aa4.45□□□□□ -1.7
C4orf46-202ENST00000508457 R4GN34 69 aa4.43□□□□□ -1.7
C4orf46-202ENST00000508457 PKHD1L1Q86WI1 4243 aa4.42□□□□□ -1.7
C4orf46-202ENST00000508457 PCLOQ9Y6V0 5065 aa4.41□□□□□ -1.7
C4orf46-202ENST00000508457 ABCA13Q86UQ4 5058 aa4.41□□□□□ -1.7
C4orf46-202ENST00000508457 PRO2289Q9P1D8 64 aa4.39□□□□□ -1.71
C4orf46-202ENST00000508457 KRTAP12-1P59990 96 aa4.39□□□□□ -1.71
C4orf46-202ENST00000508457 KRTAP10-4P60372 401 aaPredicted RBP4.39□□□□□ -1.71
C4orf46-202ENST00000508457 HERC1Q15751 4861 aa4.31□□□□□ -1.72
C4orf46-202ENST00000508457 LPAP08519 4548 aa4.3□□□□□ -1.72
C4orf46-202ENST00000508457 LRP2P98164 4655 aa4.3□□□□□ -1.72
C4orf46-202ENST00000508457 MT1HL1P0DM35 61 aa4.24□□□□□ -1.73
C4orf46-202ENST00000508457 KRTAP3-3Q9BYR6 98 aa4.24□□□□□ -1.73
C4orf46-202ENST00000508457 TNXBP22105 4242 aa4.23□□□□□ -1.73
C4orf46-202ENST00000508457 MUC2Q02817 5179 aa4.23□□□□□ -1.73
C4orf46-202ENST00000508457 RNF213Q63HN8 5207 aa4.17□□□□□ -1.74
C4orf46-202ENST00000508457 M0QZ58 72 aa4.13□□□□□ -1.75
C4orf46-202ENST00000508457 UBR4Q5T4S7 5183 aa4.13□□□□□ -1.75
C4orf46-202ENST00000508457 INE1O15225 51 aa4.08□□□□□ -1.76
C4orf46-202ENST00000508457 RPS29P62273 56 aaKnown RBP4.07□□□□□ -1.76
C4orf46-202ENST00000508457 HMCN2Q8NDA2 5059 aa4.06□□□□□ -1.76
C4orf46-202ENST00000508457 FAT4Q6V0I7 4981 aa4.04□□□□□ -1.76
C4orf46-202ENST00000508457 PP632Q6XCG6 107 aa4.03□□□□□ -1.76
C4orf46-202ENST00000508457 KRTAP4-1Q9BYQ7 146 aa3.96□□□□□ -1.78
C4orf46-202ENST00000508457 KRTAP23-1A1A580 65 aa3.93□□□□□ -1.78
C4orf46-202ENST00000508457 MUC17Q685J3 4493 aa3.91□□□□□ -1.78
C4orf46-202ENST00000508457 SPRR5A0A1B0GTR4 108 aa3.91□□□□□ -1.78
C4orf46-202ENST00000508457 M0R2T5 61 aa3.86□□□□□ -1.79
C4orf46-202ENST00000508457 LORP23490 312 aaPredicted RBP3.83□□□□□ -1.8
C4orf46-202ENST00000508457 FSIP2Q5CZC0 6907 aa3.79□□□□□ -1.8
C4orf46-202ENST00000508457 TNP1P09430 55 aa3.79□□□□□ -1.8
C4orf46-202ENST00000508457 LCE2AQ5TA79 106 aaPredicted RBP3.77□□□□□ -1.81
C4orf46-202ENST00000508457 LCE2DQ5TA82 110 aaPredicted RBP3.72□□□□□ -1.81
C4orf46-202ENST00000508457 KRTAP9-2Q9BYQ4 174 aa3.67□□□□□ -1.82
C4orf46-202ENST00000508457 KRTAP9-6A0A140TA67 174 aa3.63□□□□□ -1.83
C4orf46-202ENST00000508457 FLGP20930 4061 aaPredicted RBP3.63□□□□□ -1.83
C4orf46-202ENST00000508457 USH2AO75445 5202 aa3.63□□□□□ -1.83
C4orf46-202ENST00000508457 KRTAP19-2Q3LHN2 52 aa3.62□□□□□ -1.83
C4orf46-202ENST00000508457 LCE2CQ5TA81 110 aa3.61□□□□□ -1.83
C4orf46-202ENST00000508457 KRTAP10-10P60014 251 aa3.6□□□□□ -1.83
C4orf46-202ENST00000508457 LOC100996750A0A140TA64 210 aa3.59□□□□□ -1.83
C4orf46-202ENST00000508457 MT1HP80294 61 aa3.59□□□□□ -1.83
C4orf46-202ENST00000508457 KRTAP4-6Q9BYQ5 205 aa3.59□□□□□ -1.83
C4orf46-202ENST00000508457 LCE3AQ5TA76 89 aa3.52□□□□□ -1.85
C4orf46-202ENST00000508457 MT1FP04733 61 aa3.49□□□□□ -1.85
C4orf46-202ENST00000508457 MT2AP02795 61 aa3.47□□□□□ -1.85
C4orf46-202ENST00000508457 CRCT1Q9UGL9 99 aa3.46□□□□□ -1.86
C4orf46-202ENST00000508457 KRTAP9-8Q9BYQ0 159 aa3.42□□□□□ -1.86
C4orf46-202ENST00000508457 KMT2DO14686 5537 aa3.37□□□□□ -1.87
C4orf46-202ENST00000508457 KRTAP19-1Q8IUB9 90 aa3.37□□□□□ -1.87
C4orf46-202ENST00000508457 KRTAP10-12P60413 245 aa3.31□□□□□ -1.88
C4orf46-202ENST00000508457 KRTAP12-3P60328 96 aa3.29□□□□□ -1.88
C4orf46-202ENST00000508457 LCE2BO14633 110 aa3.29□□□□□ -1.88
C4orf46-202ENST00000508457 SSPOA2VEC9 5147 aa3.28□□□□□ -1.88
C4orf46-202ENST00000508457 KRTAP9-3Q9BYQ3 159 aa3.28□□□□□ -1.89
C4orf46-202ENST00000508457 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.25□□□□□ -1.89
C4orf46-202ENST00000508457 SPRR2GQ9BYE4 73 aa3.25□□□□□ -1.89
C4orf46-202ENST00000508457 KRTAP8-1Q8IUC2 63 aa3.25□□□□□ -1.89
C4orf46-202ENST00000508457 MT1BP07438 61 aa3.23□□□□□ -1.89
C4orf46-202ENST00000508457 KRTAP9-7A8MTY7 169 aa3.21□□□□□ -1.9
C4orf46-202ENST00000508457 KRTAP19-6Q3LI70 58 aa3.17□□□□□ -1.9
C4orf46-202ENST00000508457 SYNE2Q8WXH0 6885 aaKnown RBP3.15□□□□□ -1.9
C4orf46-202ENST00000508457 MT1XP80297 61 aa3.14□□□□□ -1.91
C4orf46-202ENST00000508457 KRTAP10-7P60409 375 aaPredicted RBP3.13□□□□□ -1.91
C4orf46-202ENST00000508457 KRTAP10-5P60370 271 aa3.13□□□□□ -1.91
C4orf46-202ENST00000508457 KRTAP19-8Q3LI54 63 aa3.13□□□□□ -1.91
C4orf46-202ENST00000508457 KRTAP4-8A0A0G2JLE6 195 aa3.12□□□□□ -1.91
C4orf46-202ENST00000508457 KRTAP6-3Q3LI67 103 aa3.12□□□□□ -1.91
C4orf46-202ENST00000508457 KRTAP4-8Q9BYQ9 185 aa3.12□□□□□ -1.91
C4orf46-202ENST00000508457 FCGBPQ9Y6R7 5405 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms