RNA–Protein interactions for RNA: ENST00000508190.1

HOXC9-203, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HOXC9, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-203ENST00000508190 SPANXA2-OT1Q8N9U9 137 aa10.07□□□□□ -0.8
HOXC9-203ENST00000508190 NDUFC1O43677 76 aa10.06□□□□□ -0.8
HOXC9-203ENST00000508190 KRTAP10-6P60371 365 aaPredicted RBP10.03□□□□□ -0.8
HOXC9-203ENST00000508190 LORP23490 312 aaPredicted RBP9.99□□□□□ -0.81
HOXC9-203ENST00000508190 PCP4P48539 62 aa9.99□□□□□ -0.81
HOXC9-203ENST00000508190 ACYP2P14621 99 aa9.97□□□□□ -0.81
HOXC9-203ENST00000508190 CSAG1Q6PB30 78 aa9.92□□□□□ -0.82
HOXC9-203ENST00000508190 KRTAP9-8Q9BYQ0 159 aa9.88□□□□□ -0.83
HOXC9-203ENST00000508190 MT2AP02795 61 aa9.82□□□□□ -0.84
HOXC9-203ENST00000508190 CHKB-CPT1BH3BT56 60 aa9.82□□□□□ -0.84
HOXC9-203ENST00000508190 LCE2BO14633 110 aa9.8□□□□□ -0.84
HOXC9-203ENST00000508190 COA5Q86WW8 74 aa9.8□□□□□ -0.84
HOXC9-203ENST00000508190 MT1FP04733 61 aa9.77□□□□□ -0.85
HOXC9-203ENST00000508190 TMEM258P61165 79 aa9.77□□□□□ -0.85
HOXC9-203ENST00000508190 ATP5EP56381 51 aaPredicted RBP9.75□□□□□ -0.85
HOXC9-203ENST00000508190 KRTAP10-10P60014 251 aa9.71□□□□□ -0.86
HOXC9-203ENST00000508190 SPTSSBQ8NFR3 76 aa9.69□□□□□ -0.86
HOXC9-203ENST00000508190 H0YAA0 97 aa9.62□□□□□ -0.87
HOXC9-203ENST00000508190 ADM2Q7Z4H4 148 aa9.6□□□□□ -0.87
HOXC9-203ENST00000508190 KRTAP9-3Q9BYQ3 159 aa9.55□□□□□ -0.88
HOXC9-203ENST00000508190 P0C880 135 aa9.5□□□□□ -0.89
HOXC9-203ENST00000508190 SERP1Q9Y6X1 66 aa9.46□□□□□ -0.9
HOXC9-203ENST00000508190 KRTAP9-2Q9BYQ4 174 aa9.44□□□□□ -0.9
HOXC9-203ENST00000508190 KRTAP19-1Q8IUB9 90 aa9.39□□□□□ -0.91
HOXC9-203ENST00000508190 CRIPTQ9P021 101 aa9.37□□□□□ -0.91
HOXC9-203ENST00000508190 SVIPQ8NHG7 77 aa9.34□□□□□ -0.91
HOXC9-203ENST00000508190 SPRR2GQ9BYE4 73 aa9.34□□□□□ -0.91
HOXC9-203ENST00000508190 SEC61GP60059 68 aa9.31□□□□□ -0.92
HOXC9-203ENST00000508190 R4GN34 69 aa9.28□□□□□ -0.92
HOXC9-203ENST00000508190 M0QZ58 72 aa9.26□□□□□ -0.93
HOXC9-203ENST00000508190 A0A1B0GU69 56 aa9.26□□□□□ -0.93
HOXC9-203ENST00000508190 USH2AO75445 5202 aa9.24□□□□□ -0.93
HOXC9-203ENST00000508190 LINC01558Q9Y6Z2 57 aa9.24□□□□□ -0.93
HOXC9-203ENST00000508190 FSIP2Q5CZC0 6907 aa9.18□□□□□ -0.94
HOXC9-203ENST00000508190 RPS28P62857 69 aaKnown RBP9.18□□□□□ -0.94
HOXC9-203ENST00000508190 KRTAP19-8Q3LI54 63 aa9.18□□□□□ -0.94
HOXC9-203ENST00000508190 KRTAP13-4Q3LI77 160 aa9.15□□□□□ -0.94
HOXC9-203ENST00000508190 A0A1B0GU33 70 aa9.13□□□□□ -0.95
HOXC9-203ENST00000508190 MT1BP07438 61 aa9.13□□□□□ -0.95
HOXC9-203ENST00000508190 PRR15LQ9BU68 103 aa9.13□□□□□ -0.95
HOXC9-203ENST00000508190 SMIM26A0A096LP01 95 aa9.12□□□□□ -0.95
HOXC9-203ENST00000508190 LINC01554Q52M75 96 aa9.11□□□□□ -0.95
HOXC9-203ENST00000508190 Q5VV11 94 aa9.11□□□□□ -0.95
HOXC9-203ENST00000508190 Q1T7F1 81 aa9.08□□□□□ -0.96
HOXC9-203ENST00000508190 V9GYY9 64 aa9.06□□□□□ -0.96
HOXC9-203ENST00000508190 SPATA8Q6RVD6 105 aa9.05□□□□□ -0.96
HOXC9-203ENST00000508190 SSPOA2VEC9 5147 aa9.05□□□□□ -0.96
HOXC9-203ENST00000508190 PSPHP1O15172 72 aa9□□□□□ -0.97
HOXC9-203ENST00000508190 CRCT1Q9UGL9 99 aa9□□□□□ -0.97
HOXC9-203ENST00000508190 LOC100996750A0A140TA64 210 aa9□□□□□ -0.97
HOXC9-203ENST00000508190 KRTAP4-6Q9BYQ5 205 aa9□□□□□ -0.97
HOXC9-203ENST00000508190 A0A0D9SG42 100 aa8.94□□□□□ -0.98
HOXC9-203ENST00000508190 PLAC4Q8WY50 150 aa8.91□□□□□ -0.98
HOXC9-203ENST00000508190 KRTAP19-6Q3LI70 58 aa8.9□□□□□ -0.99
HOXC9-203ENST00000508190 KRTAP9-6A0A140TA67 174 aa8.88□□□□□ -0.99
HOXC9-203ENST00000508190 A6NN06 94 aa8.87□□□□□ -0.99
HOXC9-203ENST00000508190 A8MU10 97 aa8.86□□□□□ -0.99
HOXC9-203ENST00000508190 UQCR11O14957 56 aa8.86□□□□□ -0.99
HOXC9-203ENST00000508190 KRTAP12-1P59990 96 aa8.75□□□□□ -1.01
HOXC9-203ENST00000508190 KRTAP10-5P60370 271 aa8.75□□□□□ -1.01
HOXC9-203ENST00000508190 MIR22HGQ0VDD5 57 aa8.75□□□□□ -1.01
HOXC9-203ENST00000508190 SPINT4Q6UDR6 99 aa8.75□□□□□ -1.01
HOXC9-203ENST00000508190 FCGBPQ9Y6R7 5405 aaPredicted RBP8.73□□□□□ -1.01
HOXC9-203ENST00000508190 KRTAP12-2P59991 146 aa8.72□□□□□ -1.01
HOXC9-203ENST00000508190 MT1XP80297 61 aa8.72□□□□□ -1.01
HOXC9-203ENST00000508190 A6NED7 52 aa8.7□□□□□ -1.02
HOXC9-203ENST00000508190 CAMK2N1Q7Z7J9 78 aa8.64□□□□□ -1.03
HOXC9-203ENST00000508190 PRO2289Q9P1D8 64 aa8.63□□□□□ -1.03
HOXC9-203ENST00000508190 CDC42SE1Q9NRR8 79 aa8.46□□□□□ -1.05
HOXC9-203ENST00000508190 K7ERS5 55 aa8.39□□□□□ -1.07
HOXC9-203ENST00000508190 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.38□□□□□ -1.07
HOXC9-203ENST00000508190 KRTAP10-7P60409 375 aaPredicted RBP8.35□□□□□ -1.07
HOXC9-203ENST00000508190 MACF1Q9UPN3 7388 aaKnown RBP8.33□□□□□ -1.08
HOXC9-203ENST00000508190 C10orf95Q9H7T3 257 aa8.33□□□□□ -1.08
HOXC9-203ENST00000508190 KRTAP10-12P60413 245 aa8.26□□□□□ -1.09
HOXC9-203ENST00000508190 BRK1Q8WUW1 75 aa8.24□□□□□ -1.09
HOXC9-203ENST00000508190 KMT2DO14686 5537 aa8.2□□□□□ -1.1
HOXC9-203ENST00000508190 PRO0628Q9UI54 55 aa8.19□□□□□ -1.1
HOXC9-203ENST00000508190 SYNE2Q8WXH0 6885 aaKnown RBP8.17□□□□□ -1.1
HOXC9-203ENST00000508190 KRTAP4-8A0A0G2JLE6 195 aa8.16□□□□□ -1.1
HOXC9-203ENST00000508190 KRTAP4-8Q9BYQ9 185 aa8.16□□□□□ -1.1
HOXC9-203ENST00000508190 TNP1P09430 55 aa8.11□□□□□ -1.11
HOXC9-203ENST00000508190 KRTAP9-7A8MTY7 169 aa8.06□□□□□ -1.12
HOXC9-203ENST00000508190 KRTAP8-1Q8IUC2 63 aa8.04□□□□□ -1.12
HOXC9-203ENST00000508190 ROMO1P60602 79 aa8□□□□□ -1.13
HOXC9-203ENST00000508190 KRTAP6-3Q3LI67 103 aa8□□□□□ -1.13
HOXC9-203ENST00000508190 KRTAP25-1Q3LHN0 102 aa7.97□□□□□ -1.13
HOXC9-203ENST00000508190 KRTAP5-9P26371 169 aa7.92□□□□□ -1.14
HOXC9-203ENST00000508190 LCE3AQ5TA76 89 aa7.92□□□□□ -1.14
HOXC9-203ENST00000508190 SPRR2FQ96RM1 72 aa7.88□□□□□ -1.15
HOXC9-203ENST00000508190 KRTAP19-7Q3SYF9 63 aa7.78□□□□□ -1.16
HOXC9-203ENST00000508190 KRTAP19-5Q3LI72 72 aa7.77□□□□□ -1.17
HOXC9-203ENST00000508190 MUC12Q9UKN1 5478 aa7.76□□□□□ -1.17
HOXC9-203ENST00000508190 PMAIP1Q13794 54 aa7.75□□□□□ -1.17
HOXC9-203ENST00000508190 KRTAP4-12Q9BQ66 201 aa7.72□□□□□ -1.17
HOXC9-203ENST00000508190 LCE3BQ5TA77 95 aa7.71□□□□□ -1.18
HOXC9-203ENST00000508190 KRTAP23-1A1A580 65 aa7.68□□□□□ -1.18
HOXC9-203ENST00000508190 MT1EP04732 61 aa7.67□□□□□ -1.18
HOXC9-203ENST00000508190 MDN1Q9NU22 5596 aa7.62□□□□□ -1.19
HOXC9-203ENST00000508190 SPRR2EP22531 72 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms