RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 FLNCQ14315 2725 aa1.31□□□□□ -2.2
HMGB3P15-201ENST00000507326 VPS13DQ5THJ4 4388 aa1.31□□□□□ -2.2
HMGB3P15-201ENST00000507326 CRYBG3Q68DQ2 2970 aa1.31□□□□□ -2.2
HMGB3P15-201ENST00000507326 KRTAP4-1Q9BYQ7 146 aa1.31□□□□□ -2.2
HMGB3P15-201ENST00000507326 ACANP16112 2415 aa1.31□□□□□ -2.2
HMGB3P15-201ENST00000507326 APCP25054 2843 aa1.31□□□□□ -2.2
HMGB3P15-201ENST00000507326 MXRA5Q9NR99 2828 aa1.31□□□□□ -2.2
HMGB3P15-201ENST00000507326 DNAH5Q8TE73 4624 aa1.31□□□□□ -2.2
HMGB3P15-201ENST00000507326 PLECQ15149 4684 aaKnown RBP1.31□□□□□ -2.2
HMGB3P15-201ENST00000507326 DNAH7Q8WXX0 4024 aa1.31□□□□□ -2.2
HMGB3P15-201ENST00000507326 UTP20O75691 2785 aaKnown RBP1.3□□□□□ -2.2
HMGB3P15-201ENST00000507326 F8P00451 2351 aa1.3□□□□□ -2.2
HMGB3P15-201ENST00000507326 EPG5Q9HCE0 2579 aa1.3□□□□□ -2.2
HMGB3P15-201ENST00000507326 DNAH11Q96DT5 4516 aa1.3□□□□□ -2.2
HMGB3P15-201ENST00000507326 SACSQ9NZJ4 4579 aa1.3□□□□□ -2.2
HMGB3P15-201ENST00000507326 DNAH2Q9P225 4427 aa1.3□□□□□ -2.2
HMGB3P15-201ENST00000507326 ALMS1Q8TCU4 4167 aa1.3□□□□□ -2.2
HMGB3P15-201ENST00000507326 MTORP42345 2549 aa1.3□□□□□ -2.2
HMGB3P15-201ENST00000507326 MYO18BQ8IUG5 2567 aa1.3□□□□□ -2.2
HMGB3P15-201ENST00000507326 STARD9Q9P2P6 4700 aa1.29□□□□□ -2.2
HMGB3P15-201ENST00000507326 NSD1Q96L73 2696 aaPredicted RBP1.29□□□□□ -2.2
HMGB3P15-201ENST00000507326 TEX15Q9BXT5 2789 aa1.29□□□□□ -2.2
HMGB3P15-201ENST00000507326 TOMM7Q9P0U1 55 aa1.29□□□□□ -2.2
HMGB3P15-201ENST00000507326 LYSTQ99698 3801 aa1.29□□□□□ -2.2
HMGB3P15-201ENST00000507326 FRAS1Q86XX4 4008 aa1.29□□□□□ -2.2
HMGB3P15-201ENST00000507326 TENM3Q9P273 2699 aa1.28□□□□□ -2.2
HMGB3P15-201ENST00000507326 CHD6Q8TD26 2715 aa1.28□□□□□ -2.2
HMGB3P15-201ENST00000507326 A0A096LPF7 62 aa1.28□□□□□ -2.2
HMGB3P15-201ENST00000507326 HTN1P15515 57 aa1.28□□□□□ -2.2
HMGB3P15-201ENST00000507326 KRTAP12-3P60328 96 aa1.28□□□□□ -2.2
HMGB3P15-201ENST00000507326 HIVEP1P15822 2718 aa1.28□□□□□ -2.2
HMGB3P15-201ENST00000507326 PKHD1L1Q86WI1 4243 aa1.27□□□□□ -2.21
HMGB3P15-201ENST00000507326 CSMD3Q7Z407 3707 aa1.27□□□□□ -2.21
HMGB3P15-201ENST00000507326 OTOGQ6ZRI0 2925 aa1.26□□□□□ -2.21
HMGB3P15-201ENST00000507326 HECTD4Q9Y4D8 3996 aa1.26□□□□□ -2.21
HMGB3P15-201ENST00000507326 HELZ2Q9BYK8 2649 aaKnown RBP1.26□□□□□ -2.21
HMGB3P15-201ENST00000507326 UNC79Q9P2D8 2635 aa1.26□□□□□ -2.21
HMGB3P15-201ENST00000507326 FASNP49327 2511 aaKnown RBP1.26□□□□□ -2.21
HMGB3P15-201ENST00000507326 H3BNG1 76 aa1.26□□□□□ -2.21
HMGB3P15-201ENST00000507326 DEFB135Q30KP9 77 aa1.26□□□□□ -2.21
HMGB3P15-201ENST00000507326 CLPSL2Q6UWE3 100 aa1.26□□□□□ -2.21
HMGB3P15-201ENST00000507326 SMR3AQ99954 134 aa1.26□□□□□ -2.21
HMGB3P15-201ENST00000507326 KMT2AQ03164 3969 aa1.25□□□□□ -2.21
HMGB3P15-201ENST00000507326 MEGF8Q7Z7M0 2845 aa1.25□□□□□ -2.21
HMGB3P15-201ENST00000507326 FAT2Q9NYQ8 4349 aa1.25□□□□□ -2.21
HMGB3P15-201ENST00000507326 TENM4Q6N022 2769 aa1.25□□□□□ -2.21
HMGB3P15-201ENST00000507326 ITPR2Q14571 2701 aa1.24□□□□□ -2.21
HMGB3P15-201ENST00000507326 VWFP04275 2813 aa1.24□□□□□ -2.21
HMGB3P15-201ENST00000507326 NF1P21359 2839 aa1.24□□□□□ -2.21
HMGB3P15-201ENST00000507326 DEFB4AO15263 64 aa1.24□□□□□ -2.21
HMGB3P15-201ENST00000507326 LINC01556Q5JQF7 62 aa1.24□□□□□ -2.21
HMGB3P15-201ENST00000507326 GCN1Q92616 2671 aaKnown RBP1.24□□□□□ -2.21
HMGB3P15-201ENST00000507326 SETD2Q9BYW2 2564 aaPredicted RBP1.24□□□□□ -2.21
HMGB3P15-201ENST00000507326 NIPBLQ6KC79 2804 aaeCLIP1.24□□□□□ -2.21
HMGB3P15-201ENST00000507326 MAP1AP78559 2803 aaPredicted RBP1.23□□□□□ -2.21
HMGB3P15-201ENST00000507326 SPINK1P00995 79 aa1.23□□□□□ -2.21
HMGB3P15-201ENST00000507326 TENM1Q9UKZ4 2725 aa1.22□□□□□ -2.21
HMGB3P15-201ENST00000507326 M0QZ58 72 aa1.22□□□□□ -2.21
HMGB3P15-201ENST00000507326 SPART-AS1P0CW21 52 aa1.22□□□□□ -2.21
HMGB3P15-201ENST00000507326 SPINK6Q6UWN8 80 aa1.22□□□□□ -2.21
HMGB3P15-201ENST00000507326 APOBP04114 4563 aaKnown RBP1.22□□□□□ -2.21
HMGB3P15-201ENST00000507326 TEP1Q99973 2627 aaKnown RBP1.21□□□□□ -2.22
HMGB3P15-201ENST00000507326 DYNC1H1Q14204 4646 aaKnown RBP1.21□□□□□ -2.22
HMGB3P15-201ENST00000507326 CENPEQ02224 2701 aa1.21□□□□□ -2.22
HMGB3P15-201ENST00000507326 ATRQ13535 2644 aa1.2□□□□□ -2.22
HMGB3P15-201ENST00000507326 LRP1BQ9NZR2 4599 aa1.2□□□□□ -2.22
HMGB3P15-201ENST00000507326 HYDINQ4G0P3 5121 aa1.2□□□□□ -2.22
HMGB3P15-201ENST00000507326 PKD1L1Q8TDX9 2849 aa1.2□□□□□ -2.22
HMGB3P15-201ENST00000507326 VPS13BQ7Z7G8 4022 aa1.19□□□□□ -2.22
HMGB3P15-201ENST00000507326 PKD1P98161 4303 aa1.19□□□□□ -2.22
HMGB3P15-201ENST00000507326 TNXBP22105 4242 aa1.19□□□□□ -2.22
HMGB3P15-201ENST00000507326 A0A096LNI7 61 aa1.19□□□□□ -2.22
HMGB3P15-201ENST00000507326 MAST4O15021 2626 aa1.19□□□□□ -2.22
HMGB3P15-201ENST00000507326 HTN3P15516 51 aa1.19□□□□□ -2.22
HMGB3P15-201ENST00000507326 PKHD1P08F94 4074 aa1.19□□□□□ -2.22
HMGB3P15-201ENST00000507326 DNHD1Q96M86 4753 aa1.19□□□□□ -2.22
HMGB3P15-201ENST00000507326 NBEAL2Q6ZNJ1 2754 aa1.19□□□□□ -2.22
HMGB3P15-201ENST00000507326 HECTD1Q9ULT8 2610 aa1.18□□□□□ -2.22
HMGB3P15-201ENST00000507326 KRTAP10-4P60372 401 aaPredicted RBP1.18□□□□□ -2.22
HMGB3P15-201ENST00000507326 FAT3Q8TDW7 4589 aa1.18□□□□□ -2.22
HMGB3P15-201ENST00000507326 FCGBPQ9Y6R7 5405 aaPredicted RBP1.18□□□□□ -2.22
HMGB3P15-201ENST00000507326 STAB1Q9NY15 2570 aa1.17□□□□□ -2.22
HMGB3P15-201ENST00000507326 HSPG2P98160 4391 aa1.17□□□□□ -2.22
HMGB3P15-201ENST00000507326 STAB2Q8WWQ8 2551 aa1.17□□□□□ -2.22
HMGB3P15-201ENST00000507326 HMCN1Q96RW7 5635 aa1.17□□□□□ -2.22
HMGB3P15-201ENST00000507326 FAT1Q14517 4588 aa1.16□□□□□ -2.22
HMGB3P15-201ENST00000507326 FLNBO75369 2602 aaKnown RBP1.16□□□□□ -2.22
HMGB3P15-201ENST00000507326 M0R2T5 61 aa1.16□□□□□ -2.22
HMGB3P15-201ENST00000507326 NOTCH1P46531 2555 aa1.15□□□□□ -2.23
HMGB3P15-201ENST00000507326 TENM2Q9NT68 2774 aa1.15□□□□□ -2.23
HMGB3P15-201ENST00000507326 COL7A1Q02388 2944 aa1.15□□□□□ -2.23
HMGB3P15-201ENST00000507326 LRP1Q07954 4544 aaKnown RBP1.14□□□□□ -2.23
HMGB3P15-201ENST00000507326 C9orf92A6NGG3 77 aa1.14□□□□□ -2.23
HMGB3P15-201ENST00000507326 NBEAL1Q6ZS30 2694 aa1.13□□□□□ -2.23
HMGB3P15-201ENST00000507326 RYR2Q92736 4967 aa1.13□□□□□ -2.23
HMGB3P15-201ENST00000507326 FBN3Q75N90 2809 aa1.12□□□□□ -2.23
HMGB3P15-201ENST00000507326 MGAM2Q2M2H8 2515 aa1.12□□□□□ -2.23
HMGB3P15-201ENST00000507326 TNP1P09430 55 aa1.11□□□□□ -2.23
HMGB3P15-201ENST00000507326 COL6A5A8TX70 2615 aa1.1□□□□□ -2.23
HMGB3P15-201ENST00000507326 MYCBP2O75592 4640 aa1.09□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms