RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 KRTAP9-8Q9BYQ0 159 aa4.72□□□□□ -1.65
SFXN1-205ENST00000506963 SMIM20Q8N5G0 67 aa4.71□□□□□ -1.66
SFXN1-205ENST00000506963 LINC00208Q96KT6 92 aa4.71□□□□□ -1.66
SFXN1-205ENST00000506963 FAM236AA0A1B0GUQ0 79 aa4.7□□□□□ -1.66
SFXN1-205ENST00000506963 FAM236BA0A1B0GV22 79 aa4.7□□□□□ -1.66
SFXN1-205ENST00000506963 KRTAP4-7Q9BYR0 210 aa4.7□□□□□ -1.66
SFXN1-205ENST00000506963 TRAV7A0A075B6U4 112 aa4.68□□□□□ -1.66
SFXN1-205ENST00000506963 MT2AP02795 61 aa4.67□□□□□ -1.66
SFXN1-205ENST00000506963 KLKP1Q107X0 134 aa4.66□□□□□ -1.66
SFXN1-205ENST00000506963 A8MUN3 132 aa4.64□□□□□ -1.67
SFXN1-205ENST00000506963 S4R3F8 94 aa4.63□□□□□ -1.67
SFXN1-205ENST00000506963 MT1FP04733 61 aa4.62□□□□□ -1.67
SFXN1-205ENST00000506963 LCA10Q71F78 164 aa4.61□□□□□ -1.67
SFXN1-205ENST00000506963 SERP2Q8N6R1 65 aa4.6□□□□□ -1.67
SFXN1-205ENST00000506963 CSAG1Q6PB30 78 aa4.59□□□□□ -1.67
SFXN1-205ENST00000506963 KRTAP10-10P60014 251 aa4.58□□□□□ -1.68
SFXN1-205ENST00000506963 DMAC1Q96GE9 116 aa4.57□□□□□ -1.68
SFXN1-205ENST00000506963 KRTAP9-3Q9BYQ3 159 aa4.57□□□□□ -1.68
SFXN1-205ENST00000506963 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
SFXN1-205ENST00000506963 NDUFC1O43677 76 aa4.53□□□□□ -1.68
SFXN1-205ENST00000506963 C20orf197Q8N268 126 aa4.52□□□□□ -1.69
SFXN1-205ENST00000506963 SNURFQ9Y675 71 aa4.52□□□□□ -1.69
SFXN1-205ENST00000506963 COX7CP15954 63 aa4.51□□□□□ -1.69
SFXN1-205ENST00000506963 SPANXA2-OT1Q8N9U9 137 aa4.51□□□□□ -1.69
SFXN1-205ENST00000506963 FSIP2Q5CZC0 6907 aa4.51□□□□□ -1.69
SFXN1-205ENST00000506963 H0YAA0 97 aa4.5□□□□□ -1.69
SFXN1-205ENST00000506963 ACYP2P14621 99 aa4.48□□□□□ -1.69
SFXN1-205ENST00000506963 KRTAP4-2Q9BYR5 136 aa4.48□□□□□ -1.69
SFXN1-205ENST00000506963 LCE4AQ5TA78 99 aa4.47□□□□□ -1.69
SFXN1-205ENST00000506963 CRCT1Q9UGL9 99 aa4.46□□□□□ -1.7
SFXN1-205ENST00000506963 USH2AO75445 5202 aa4.43□□□□□ -1.7
SFXN1-205ENST00000506963 KRTAP19-4Q3LI73 84 aa4.43□□□□□ -1.7
SFXN1-205ENST00000506963 ANAPC13Q9BS18 74 aa4.43□□□□□ -1.7
SFXN1-205ENST00000506963 SPRR2GQ9BYE4 73 aa4.42□□□□□ -1.7
SFXN1-205ENST00000506963 CRIPTQ9P021 101 aa4.42□□□□□ -1.7
SFXN1-205ENST00000506963 H7BZZ5 65 aa4.4□□□□□ -1.71
SFXN1-205ENST00000506963 KRTAP4-11Q9BYQ6 195 aa4.4□□□□□ -1.71
SFXN1-205ENST00000506963 SPTSSBQ8NFR3 76 aa4.39□□□□□ -1.71
SFXN1-205ENST00000506963 CYSTM1Q9H1C7 97 aa4.39□□□□□ -1.71
SFXN1-205ENST00000506963 SSPOA2VEC9 5147 aa4.38□□□□□ -1.71
SFXN1-205ENST00000506963 ADM2Q7Z4H4 148 aa4.37□□□□□ -1.71
SFXN1-205ENST00000506963 CHKB-CPT1BH3BT56 60 aa4.36□□□□□ -1.71
SFXN1-205ENST00000506963 KRTAP19-8Q3LI54 63 aa4.36□□□□□ -1.71
SFXN1-205ENST00000506963 SVIPQ8NHG7 77 aa4.36□□□□□ -1.71
SFXN1-205ENST00000506963 KRTAP9-7A8MTY7 169 aa4.35□□□□□ -1.71
SFXN1-205ENST00000506963 CCDC179H3BU77 68 aa4.33□□□□□ -1.72
SFXN1-205ENST00000506963 KRTAP19-6Q3LI70 58 aa4.32□□□□□ -1.72
SFXN1-205ENST00000506963 COA5Q86WW8 74 aa4.32□□□□□ -1.72
SFXN1-205ENST00000506963 MT1BP07438 61 aa4.31□□□□□ -1.72
SFXN1-205ENST00000506963 P0C880 135 aa4.31□□□□□ -1.72
SFXN1-205ENST00000506963 LCE5AQ5TCM9 118 aa4.3□□□□□ -1.72
SFXN1-205ENST00000506963 Q5VV11 94 aa4.3□□□□□ -1.72
SFXN1-205ENST00000506963 ATP5EP56381 51 aaPredicted RBP4.26□□□□□ -1.73
SFXN1-205ENST00000506963 R4GN34 69 aa4.26□□□□□ -1.73
SFXN1-205ENST00000506963 FCGBPQ9Y6R7 5405 aaPredicted RBP4.23□□□□□ -1.73
SFXN1-205ENST00000506963 M0QZ58 72 aa4.22□□□□□ -1.73
SFXN1-205ENST00000506963 TMEM258P61165 79 aa4.21□□□□□ -1.74
SFXN1-205ENST00000506963 KRTAP10-5P60370 271 aa4.17□□□□□ -1.74
SFXN1-205ENST00000506963 KRTAP23-1A1A580 65 aa4.16□□□□□ -1.74
SFXN1-205ENST00000506963 SEC61GP60059 68 aa4.16□□□□□ -1.74
SFXN1-205ENST00000506963 A6NN06 94 aa4.15□□□□□ -1.75
SFXN1-205ENST00000506963 SERP1Q9Y6X1 66 aa4.15□□□□□ -1.75
SFXN1-205ENST00000506963 PLAC4Q8WY50 150 aa4.14□□□□□ -1.75
SFXN1-205ENST00000506963 MACF1Q9UPN3 7388 aaKnown RBP4.11□□□□□ -1.75
SFXN1-205ENST00000506963 KRTAP13-4Q3LI77 160 aa4.11□□□□□ -1.75
SFXN1-205ENST00000506963 LINC01554Q52M75 96 aa4.11□□□□□ -1.75
SFXN1-205ENST00000506963 A0A1B0GU69 56 aa4.09□□□□□ -1.75
SFXN1-205ENST00000506963 KRTAP5-3Q6L8H2 238 aa4.09□□□□□ -1.75
SFXN1-205ENST00000506963 A0A1B0GU33 70 aa4.08□□□□□ -1.76
SFXN1-205ENST00000506963 MT1XP80297 61 aa4.08□□□□□ -1.76
SFXN1-205ENST00000506963 PRO2289Q9P1D8 64 aa4.08□□□□□ -1.76
SFXN1-205ENST00000506963 LINC01558Q9Y6Z2 57 aa4.07□□□□□ -1.76
SFXN1-205ENST00000506963 SYNE2Q8WXH0 6885 aaKnown RBP4.04□□□□□ -1.76
SFXN1-205ENST00000506963 PCP4P48539 62 aa4.03□□□□□ -1.76
SFXN1-205ENST00000506963 PRR15LQ9BU68 103 aa4.03□□□□□ -1.76
SFXN1-205ENST00000506963 SPATA8Q6RVD6 105 aa4.02□□□□□ -1.77
SFXN1-205ENST00000506963 KRTAP12-2P59991 146 aa3.98□□□□□ -1.77
SFXN1-205ENST00000506963 SMIM26A0A096LP01 95 aa3.97□□□□□ -1.77
SFXN1-205ENST00000506963 KRTAP6-3Q3LI67 103 aa3.97□□□□□ -1.77
SFXN1-205ENST00000506963 A0A0D9SG42 100 aa3.96□□□□□ -1.78
SFXN1-205ENST00000506963 KRTAP12-1P59990 96 aa3.95□□□□□ -1.78
SFXN1-205ENST00000506963 V9GYY9 64 aa3.95□□□□□ -1.78
SFXN1-205ENST00000506963 RPS28P62857 69 aaKnown RBP3.94□□□□□ -1.78
SFXN1-205ENST00000506963 Q1T7F1 81 aa3.94□□□□□ -1.78
SFXN1-205ENST00000506963 CAMK2N1Q7Z7J9 78 aa3.93□□□□□ -1.78
SFXN1-205ENST00000506963 A8MU10 97 aa3.91□□□□□ -1.78
SFXN1-205ENST00000506963 UQCR11O14957 56 aa3.91□□□□□ -1.78
SFXN1-205ENST00000506963 KRTAP10-12P60413 245 aa3.9□□□□□ -1.79
SFXN1-205ENST00000506963 SPINT4Q6UDR6 99 aa3.9□□□□□ -1.79
SFXN1-205ENST00000506963 KRTAP5-9P26371 169 aa3.89□□□□□ -1.79
SFXN1-205ENST00000506963 KRTAP10-7P60409 375 aaPredicted RBP3.88□□□□□ -1.79
SFXN1-205ENST00000506963 PSPHP1O15172 72 aa3.85□□□□□ -1.79
SFXN1-205ENST00000506963 MIR22HGQ0VDD5 57 aa3.83□□□□□ -1.8
SFXN1-205ENST00000506963 KRTAP8-1Q8IUC2 63 aa3.82□□□□□ -1.8
SFXN1-205ENST00000506963 NEBP20929 6669 aa3.81□□□□□ -1.8
SFXN1-205ENST00000506963 A0A0A0MQY5 61 aa3.79□□□□□ -1.8
SFXN1-205ENST00000506963 KMT2DO14686 5537 aa3.79□□□□□ -1.8
SFXN1-205ENST00000506963 C10orf95Q9H7T3 257 aa3.76□□□□□ -1.81
SFXN1-205ENST00000506963 KRTAP15-1Q3LI76 137 aa3.75□□□□□ -1.81
SFXN1-205ENST00000506963 SPRR2FQ96RM1 72 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms