RNA–Protein interactions for RNA: ENST00000504644.1

RAB28-204, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5

Gene RAB28, Length 405 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-204ENST00000504644 DEFB108BQ8NET1 73 aa2.7□□□□□ -1.98
RAB28-204ENST00000504644 TLN2Q9Y4G6 2542 aa2.7□□□□□ -1.98
RAB28-204ENST00000504644 NBEAL2Q6ZNJ1 2754 aa2.69□□□□□ -1.98
RAB28-204ENST00000504644 ANK2Q01484 3957 aa2.69□□□□□ -1.98
RAB28-204ENST00000504644 KRTAP6-3Q3LI67 103 aa2.69□□□□□ -1.98
RAB28-204ENST00000504644 TGP01266 2768 aa2.68□□□□□ -1.98
RAB28-204ENST00000504644 ZNF469Q96JG9 3925 aaPredicted RBP2.66□□□□□ -1.98
RAB28-204ENST00000504644 KRTAP5-9P26371 169 aa2.65□□□□□ -1.99
RAB28-204ENST00000504644 KRTAP5-4Q6L8H1 288 aa2.65□□□□□ -1.99
RAB28-204ENST00000504644 CUBNO60494 3623 aa2.65□□□□□ -1.99
RAB28-204ENST00000504644 TENM2Q9NT68 2774 aa2.64□□□□□ -1.99
RAB28-204ENST00000504644 VPS13CQ709C8 3753 aa2.64□□□□□ -1.99
RAB28-204ENST00000504644 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
RAB28-204ENST00000504644 KRTAP10-12P60413 245 aa2.62□□□□□ -1.99
RAB28-204ENST00000504644 LCE3CQ5T5A8 94 aa2.62□□□□□ -1.99
RAB28-204ENST00000504644 MGAM2Q2M2H8 2515 aa2.61□□□□□ -1.99
RAB28-204ENST00000504644 SONP18583 2426 aaKnown RBP2.6□□□□□ -1.99
RAB28-204ENST00000504644 DEFB136Q30KP8 78 aa2.59□□□□□ -1.99
RAB28-204ENST00000504644 NOTCH3Q9UM47 2321 aa2.59□□□□□ -2
RAB28-204ENST00000504644 TENM1Q9UKZ4 2725 aa2.55□□□□□ -2
RAB28-204ENST00000504644 ZANQ9Y493 2812 aa2.55□□□□□ -2
RAB28-204ENST00000504644 SRRM2Q9UQ35 2752 aaKnown RBP2.55□□□□□ -2
RAB28-204ENST00000504644 SPINK6Q6UWN8 80 aa2.54□□□□□ -2
RAB28-204ENST00000504644 KMT2CQ8NEZ4 4911 aaKnown RBP2.54□□□□□ -2
RAB28-204ENST00000504644 VWFP04275 2813 aa2.53□□□□□ -2
RAB28-204ENST00000504644 RYR3Q15413 4870 aa2.52□□□□□ -2.01
RAB28-204ENST00000504644 TRRAPQ9Y4A5 3859 aa2.52□□□□□ -2.01
RAB28-204ENST00000504644 SVEP1Q4LDE5 3571 aa2.51□□□□□ -2.01
RAB28-204ENST00000504644 A0A096LNI7 61 aa2.51□□□□□ -2.01
RAB28-204ENST00000504644 TNP1P09430 55 aa2.51□□□□□ -2.01
RAB28-204ENST00000504644 ANK3Q12955 4377 aaKnown RBP2.51□□□□□ -2.01
RAB28-204ENST00000504644 BIRC6Q9NR09 4857 aa2.51□□□□□ -2.01
RAB28-204ENST00000504644 HRNRQ86YZ3 2850 aaPredicted RBP2.5□□□□□ -2.01
RAB28-204ENST00000504644 TENM3Q9P273 2699 aa2.49□□□□□ -2.01
RAB28-204ENST00000504644 PRKDCP78527 4128 aaKnown RBP2.49□□□□□ -2.01
RAB28-204ENST00000504644 VPS13DQ5THJ4 4388 aa2.49□□□□□ -2.01
RAB28-204ENST00000504644 DEFB135Q30KP9 77 aa2.48□□□□□ -2.01
RAB28-204ENST00000504644 DMBT1Q9UGM3 2413 aaPredicted RBP2.48□□□□□ -2.01
RAB28-204ENST00000504644 SPART-AS1P0CW21 52 aa2.47□□□□□ -2.01
RAB28-204ENST00000504644 H3BNG1 76 aa2.45□□□□□ -2.02
RAB28-204ENST00000504644 DNAH11Q96DT5 4516 aa2.44□□□□□ -2.02
RAB28-204ENST00000504644 EPPK1P58107 5090 aaKnown RBP2.44□□□□□ -2.02
RAB28-204ENST00000504644 KRTAP10-5P60370 271 aa2.43□□□□□ -2.02
RAB28-204ENST00000504644 LINC01556Q5JQF7 62 aa2.42□□□□□ -2.02
RAB28-204ENST00000504644 PCLOQ9Y6V0 5065 aa2.41□□□□□ -2.02
RAB28-204ENST00000504644 RYR1P21817 5038 aa2.4□□□□□ -2.02
RAB28-204ENST00000504644 COL7A1Q02388 2944 aa2.4□□□□□ -2.02
RAB28-204ENST00000504644 C9orf92A6NGG3 77 aa2.4□□□□□ -2.03
RAB28-204ENST00000504644 OBSCNQ5VST9 7968 aa2.39□□□□□ -2.03
RAB28-204ENST00000504644 HYDINQ4G0P3 5121 aa2.39□□□□□ -2.03
RAB28-204ENST00000504644 KRTAP12-3P60328 96 aa2.38□□□□□ -2.03
RAB28-204ENST00000504644 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
RAB28-204ENST00000504644 CMYA5Q8N3K9 4069 aa2.37□□□□□ -2.03
RAB28-204ENST00000504644 STAB2Q8WWQ8 2551 aa2.37□□□□□ -2.03
RAB28-204ENST00000504644 A0A096LPF7 62 aa2.37□□□□□ -2.03
RAB28-204ENST00000504644 CSMD3Q7Z407 3707 aa2.37□□□□□ -2.03
RAB28-204ENST00000504644 HERC2O95714 4834 aa2.36□□□□□ -2.03
RAB28-204ENST00000504644 M0R2T5 61 aa2.36□□□□□ -2.03
RAB28-204ENST00000504644 DYNC2H1Q8NCM8 4307 aaKnown RBP2.35□□□□□ -2.03
RAB28-204ENST00000504644 RYR2Q92736 4967 aa2.35□□□□□ -2.03
RAB28-204ENST00000504644 DNAH1Q9P2D7 4330 aa2.34□□□□□ -2.03
RAB28-204ENST00000504644 KRTAP10-4P60372 401 aaPredicted RBP2.34□□□□□ -2.03
RAB28-204ENST00000504644 KRTAP9-6A8MVA2 160 aa2.33□□□□□ -2.04
RAB28-204ENST00000504644 SACSQ9NZJ4 4579 aa2.31□□□□□ -2.04
RAB28-204ENST00000504644 MYCBP2O75592 4640 aa2.31□□□□□ -2.04
RAB28-204ENST00000504644 LYSTQ99698 3801 aa2.31□□□□□ -2.04
RAB28-204ENST00000504644 KRTAP2-3P0C7H8 128 aa2.29□□□□□ -2.04
RAB28-204ENST00000504644 RPS29P62273 56 aaKnown RBP2.29□□□□□ -2.04
RAB28-204ENST00000504644 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
RAB28-204ENST00000504644 KRTAP2-4Q9BYR9 128 aa2.29□□□□□ -2.04
RAB28-204ENST00000504644 KRTAP2-1Q9BYU5 128 aa2.29□□□□□ -2.04
RAB28-204ENST00000504644 UBR4Q5T4S7 5183 aa2.27□□□□□ -2.05
RAB28-204ENST00000504644 VPS13BQ7Z7G8 4022 aa2.27□□□□□ -2.05
RAB28-204ENST00000504644 KRTAP4-3Q9BYR4 195 aa2.27□□□□□ -2.05
RAB28-204ENST00000504644 LCE3DQ9BYE3 92 aa2.26□□□□□ -2.05
RAB28-204ENST00000504644 DNAH3Q8TD57 4116 aa2.26□□□□□ -2.05
RAB28-204ENST00000504644 DNAH7Q8WXX0 4024 aa2.26□□□□□ -2.05
RAB28-204ENST00000504644 HECTD4Q9Y4D8 3996 aa2.26□□□□□ -2.05
RAB28-204ENST00000504644 DNAH9Q9NYC9 4486 aa2.26□□□□□ -2.05
RAB28-204ENST00000504644 HERC1Q15751 4861 aa2.22□□□□□ -2.05
RAB28-204ENST00000504644 KMT2AQ03164 3969 aa2.22□□□□□ -2.05
RAB28-204ENST00000504644 FRAS1Q86XX4 4008 aa2.21□□□□□ -2.05
RAB28-204ENST00000504644 KIAA1109Q2LD37 5005 aa2.21□□□□□ -2.06
RAB28-204ENST00000504644 ABCA13Q86UQ4 5058 aa2.2□□□□□ -2.06
RAB28-204ENST00000504644 DNAH8Q96JB1 4490 aa2.19□□□□□ -2.06
RAB28-204ENST00000504644 STARD9Q9P2P6 4700 aa2.17□□□□□ -2.06
RAB28-204ENST00000504644 PLECQ15149 4684 aaKnown RBP2.15□□□□□ -2.06
RAB28-204ENST00000504644 DNAH10Q8IVF4 4471 aa2.15□□□□□ -2.07
RAB28-204ENST00000504644 KRTAP8-1Q8IUC2 63 aa2.15□□□□□ -2.07
RAB28-204ENST00000504644 HUWE1Q7Z6Z7 4374 aaKnown RBP2.14□□□□□ -2.07
RAB28-204ENST00000504644 PKHD1P08F94 4074 aa2.12□□□□□ -2.07
RAB28-204ENST00000504644 HSPG2P98160 4391 aa2.1□□□□□ -2.07
RAB28-204ENST00000504644 PKHD1L1Q86WI1 4243 aa2.07□□□□□ -2.08
RAB28-204ENST00000504644 HTN3P15516 51 aa2.07□□□□□ -2.08
RAB28-204ENST00000504644 DYNC1H1Q14204 4646 aaKnown RBP2.07□□□□□ -2.08
RAB28-204ENST00000504644 FAT2Q9NYQ8 4349 aa2.07□□□□□ -2.08
RAB28-204ENST00000504644 DNAH6Q9C0G6 4158 aa2.04□□□□□ -2.08
RAB28-204ENST00000504644 PKD1P98161 4303 aa2.04□□□□□ -2.08
RAB28-204ENST00000504644 DNAH2Q9P225 4427 aa2.03□□□□□ -2.08
RAB28-204ENST00000504644 TNXBP22105 4242 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms