RNA–Protein interactions for RNA: ENST00000504290.5

TP53-208, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-208ENST00000504290 COX6B2Q6YFQ2 88 aa6.4□□□□□ -1.38
TP53-208ENST00000504290 FLG2Q5D862 2391 aaPredicted RBP6.39□□□□□ -1.39
TP53-208ENST00000504290 VPS13BQ7Z7G8 4022 aa6.38□□□□□ -1.39
TP53-208ENST00000504290 SMR3BP02814 79 aaPredicted RBP6.36□□□□□ -1.39
TP53-208ENST00000504290 DYNC1H1Q14204 4646 aaKnown RBP6.35□□□□□ -1.39
TP53-208ENST00000504290 SPINT4Q6UDR6 99 aa6.34□□□□□ -1.39
TP53-208ENST00000504290 KRTAP10-4P60372 401 aaPredicted RBP6.34□□□□□ -1.39
TP53-208ENST00000504290 C20orf166-AS1Q96NR2 134 aa6.34□□□□□ -1.39
TP53-208ENST00000504290 RPL37P61927 97 aaKnown RBP6.33□□□□□ -1.4
TP53-208ENST00000504290 PKHD1P08F94 4074 aa6.33□□□□□ -1.4
TP53-208ENST00000504290 KRTAP9-6A0A140TA67 174 aa6.28□□□□□ -1.4
TP53-208ENST00000504290 KRTAP9-7A8MTY7 169 aa6.28□□□□□ -1.4
TP53-208ENST00000504290 TPRXLQ17RH7 258 aa6.28□□□□□ -1.4
TP53-208ENST00000504290 APOBP04114 4563 aaKnown RBP6.28□□□□□ -1.4
TP53-208ENST00000504290 LCE4AQ5TA78 99 aa6.27□□□□□ -1.41
TP53-208ENST00000504290 RYR2Q92736 4967 aa6.27□□□□□ -1.41
TP53-208ENST00000504290 PKHD1L1Q86WI1 4243 aa6.23□□□□□ -1.41
TP53-208ENST00000504290 KRTAP9-4Q9BYQ2 154 aa6.23□□□□□ -1.41
TP53-208ENST00000504290 C9orf92A6NGG3 77 aa6.22□□□□□ -1.41
TP53-208ENST00000504290 NDUFAF8A1L188 74 aa6.22□□□□□ -1.41
TP53-208ENST00000504290 KRTAP10-6P60371 365 aaPredicted RBP6.21□□□□□ -1.41
TP53-208ENST00000504290 KRTAP19-1Q8IUB9 90 aa6.21□□□□□ -1.41
TP53-208ENST00000504290 KRTAP13-4Q3LI77 160 aa6.18□□□□□ -1.42
TP53-208ENST00000504290 A0A0D9SG42 100 aa6.17□□□□□ -1.42
TP53-208ENST00000504290 FAT1Q14517 4588 aa6.16□□□□□ -1.42
TP53-208ENST00000504290 C10orf95Q9H7T3 257 aa6.16□□□□□ -1.42
TP53-208ENST00000504290 Q5VSD8 79 aa6.15□□□□□ -1.42
TP53-208ENST00000504290 KRTAP9-9Q9BYP9 154 aa6.14□□□□□ -1.43
TP53-208ENST00000504290 KRTAP10-8P60410 259 aa6.13□□□□□ -1.43
TP53-208ENST00000504290 KMT2CQ8NEZ4 4911 aaKnown RBP6.12□□□□□ -1.43
TP53-208ENST00000504290 S4R3F8 94 aa6.1□□□□□ -1.43
TP53-208ENST00000504290 HSPG2P98160 4391 aa6.05□□□□□ -1.44
TP53-208ENST00000504290 KRTAP12-2P59991 146 aa6.03□□□□□ -1.44
TP53-208ENST00000504290 TNXBP22105 4242 aa6□□□□□ -1.45
TP53-208ENST00000504290 DMBT1Q9UGM3 2413 aaPredicted RBP5.99□□□□□ -1.45
TP53-208ENST00000504290 KRTAP12-1P59990 96 aa5.98□□□□□ -1.45
TP53-208ENST00000504290 KRTAP4-12Q9BQ66 201 aa5.98□□□□□ -1.45
TP53-208ENST00000504290 FAT3Q8TDW7 4589 aa5.97□□□□□ -1.45
TP53-208ENST00000504290 KRTAP17-1Q9BYP8 105 aa5.97□□□□□ -1.45
TP53-208ENST00000504290 RYR3Q15413 4870 aa5.97□□□□□ -1.45
TP53-208ENST00000504290 RYR1P21817 5038 aa5.96□□□□□ -1.45
TP53-208ENST00000504290 MT1HL1P0DM35 61 aa5.94□□□□□ -1.46
TP53-208ENST00000504290 LCE5AQ5TCM9 118 aa5.92□□□□□ -1.46
TP53-208ENST00000504290 LRP1Q07954 4544 aaKnown RBP5.92□□□□□ -1.46
TP53-208ENST00000504290 LOC100996750A0A140TA64 210 aa5.92□□□□□ -1.46
TP53-208ENST00000504290 KRTAP9-3Q9BYQ3 159 aa5.92□□□□□ -1.46
TP53-208ENST00000504290 KRTAP4-6Q9BYQ5 205 aa5.92□□□□□ -1.46
TP53-208ENST00000504290 M0QZ58 72 aa5.9□□□□□ -1.47
TP53-208ENST00000504290 CAMK2N1Q7Z7J9 78 aa5.9□□□□□ -1.47
TP53-208ENST00000504290 KRTAP4-8Q9BYQ9 185 aa5.82□□□□□ -1.48
TP53-208ENST00000504290 KIAA1109Q2LD37 5005 aa5.81□□□□□ -1.48
TP53-208ENST00000504290 LUZP6Q538Z0 58 aa5.81□□□□□ -1.48
TP53-208ENST00000504290 PLAC4Q8WY50 150 aa5.79□□□□□ -1.48
TP53-208ENST00000504290 KRTAP9-2Q9BYQ4 174 aa5.75□□□□□ -1.49
TP53-208ENST00000504290 EPPK1P58107 5090 aaKnown RBP5.74□□□□□ -1.49
TP53-208ENST00000504290 KRTAP4-5Q9BYR2 181 aa5.74□□□□□ -1.49
TP53-208ENST00000504290 MYCBP2O75592 4640 aa5.73□□□□□ -1.49
TP53-208ENST00000504290 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.7□□□□□ -1.5
TP53-208ENST00000504290 LCE3BQ5TA77 95 aa5.62□□□□□ -1.51
TP53-208ENST00000504290 R4GN34 69 aa5.62□□□□□ -1.51
TP53-208ENST00000504290 PP632Q6XCG6 107 aa5.6□□□□□ -1.51
TP53-208ENST00000504290 LRP2P98164 4655 aa5.53□□□□□ -1.52
TP53-208ENST00000504290 LPAP08519 4548 aa5.5□□□□□ -1.53
TP53-208ENST00000504290 HERC2O95714 4834 aa5.49□□□□□ -1.53
TP53-208ENST00000504290 ABCA13Q86UQ4 5058 aa5.48□□□□□ -1.53
TP53-208ENST00000504290 BIRC6Q9NR09 4857 aa5.47□□□□□ -1.53
TP53-208ENST00000504290 MUC17Q685J3 4493 aa5.43□□□□□ -1.54
TP53-208ENST00000504290 KRTAP4-1Q9BYQ7 146 aa5.42□□□□□ -1.54
TP53-208ENST00000504290 SPRR5A0A1B0GTR4 108 aa5.35□□□□□ -1.55
TP53-208ENST00000504290 KRTAP19-2Q3LHN2 52 aa5.34□□□□□ -1.56
TP53-208ENST00000504290 LCE1AQ5T7P2 110 aa5.33□□□□□ -1.56
TP53-208ENST00000504290 TNP1P09430 55 aa5.25□□□□□ -1.57
TP53-208ENST00000504290 LCE1DQ5T752 114 aa5.25□□□□□ -1.57
TP53-208ENST00000504290 PRO2289Q9P1D8 64 aa5.18□□□□□ -1.58
TP53-208ENST00000504290 PCLOQ9Y6V0 5065 aa5.16□□□□□ -1.58
TP53-208ENST00000504290 HMCN2Q8NDA2 5059 aa5.16□□□□□ -1.58
TP53-208ENST00000504290 HERC1Q15751 4861 aa5.16□□□□□ -1.58
TP53-208ENST00000504290 FLGP20930 4061 aaPredicted RBP5.15□□□□□ -1.59
TP53-208ENST00000504290 KRTAP4-8A0A0G2JLE6 195 aa5.13□□□□□ -1.59
TP53-208ENST00000504290 INE1O15225 51 aa5.07□□□□□ -1.6
TP53-208ENST00000504290 MT3P25713 68 aa5.03□□□□□ -1.6
TP53-208ENST00000504290 MT1HP80294 61 aa4.98□□□□□ -1.61
TP53-208ENST00000504290 LCE1FQ5T754 118 aa4.98□□□□□ -1.61
TP53-208ENST00000504290 MUC2Q02817 5179 aa4.98□□□□□ -1.61
TP53-208ENST00000504290 M0R2T5 61 aa4.97□□□□□ -1.61
TP53-208ENST00000504290 KRTAP4-9Q9BYQ8 210 aa4.97□□□□□ -1.61
TP53-208ENST00000504290 KRTAP4-11Q9BYQ6 195 aa4.97□□□□□ -1.61
TP53-208ENST00000504290 SPRR2GQ9BYE4 73 aa4.92□□□□□ -1.62
TP53-208ENST00000504290 KRTAP4-7Q9BYR0 210 aa4.88□□□□□ -1.63
TP53-208ENST00000504290 RNF213Q63HN8 5207 aa4.88□□□□□ -1.63
TP53-208ENST00000504290 LCE3AQ5TA76 89 aa4.88□□□□□ -1.63
TP53-208ENST00000504290 MT2AP02795 61 aa4.86□□□□□ -1.63
TP53-208ENST00000504290 KRTAP9-8Q9BYQ0 159 aa4.84□□□□□ -1.63
TP53-208ENST00000504290 KRTAP10-10P60014 251 aa4.84□□□□□ -1.64
TP53-208ENST00000504290 KRTAP2-2Q9BYT5 123 aa4.84□□□□□ -1.64
TP53-208ENST00000504290 MT1FP04733 61 aa4.83□□□□□ -1.64
TP53-208ENST00000504290 KRTAP8-1Q8IUC2 63 aa4.8□□□□□ -1.64
TP53-208ENST00000504290 UBR4Q5T4S7 5183 aa4.79□□□□□ -1.64
TP53-208ENST00000504290 FAT4Q6V0I7 4981 aa4.78□□□□□ -1.64
TP53-208ENST00000504290 KRTAP19-8Q3LI54 63 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms