RNA–Protein interactions for RNA: ENST00000504290.5

TP53-208, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-208ENST00000504290 CHIC1Q5VXU3 224 aa25.62■■□□□ 1.69
TP53-208ENST00000504290 AEBP2Q6ZN18 517 aaPredicted RBP25.17■■□□□ 1.62
TP53-208ENST00000504290 NISCHQ9Y2I1 1504 aa24.4■■□□□ 1.5
TP53-208ENST00000504290 PHF23Q9BUL5 403 aaPredicted RBP22.87■■□□□ 1.25
TP53-208ENST00000504290 PLPPR3Q6T4P5 718 aa21.32■■□□□ 1
TP53-208ENST00000504290 CCDC180Q9P1Z9 1646 aa21.16■□□□□ 0.98
TP53-208ENST00000504290 SENP3Q9H4L4 574 aaPredicted RBP20.84■□□□□ 0.93
TP53-208ENST00000504290 ZCCHC6Q5VYS8 1495 aaKnown RBP20.58■□□□□ 0.89
TP53-208ENST00000504290 EHMT2Q96KQ7 1210 aa20.53■□□□□ 0.88
TP53-208ENST00000504290 ADRA2BP18089 450 aa20.25■□□□□ 0.83
TP53-208ENST00000504290 KCNA4P22459 653 aa20.24■□□□□ 0.83
TP53-208ENST00000504290 DCAF1Q9Y4B6 1507 aa20.21■□□□□ 0.83
TP53-208ENST00000504290 HRCP23327 699 aa20.11■□□□□ 0.81
TP53-208ENST00000504290 SHROOM4Q9ULL8 1493 aa20.11■□□□□ 0.81
TP53-208ENST00000504290 DCAF8L2P0C7V8 631 aa19.92■□□□□ 0.78
TP53-208ENST00000504290 MYO15BQ96JP2 1530 aa19.82■□□□□ 0.76
TP53-208ENST00000504290 PPP6R1Q9UPN7 881 aa19.81■□□□□ 0.76
TP53-208ENST00000504290 PELP1Q8IZL8 1130 aaKnown RBP19.7■□□□□ 0.74
TP53-208ENST00000504290 CSRNP3Q8WYN3 585 aa19.6■□□□□ 0.73
TP53-208ENST00000504290 NACADO15069 1562 aa19.57■□□□□ 0.72
TP53-208ENST00000504290 SUPT5HO00267 1087 aaKnown RBP19.54■□□□□ 0.72
TP53-208ENST00000504290 ABCC9O60706 1549 aa19.54■□□□□ 0.72
TP53-208ENST00000504290 PCGF6Q9BYE7 350 aa19.53■□□□□ 0.72
TP53-208ENST00000504290 SLC24A1O60721 1099 aa19.46■□□□□ 0.71
TP53-208ENST00000504290 PPARGC1BQ86YN6 1023 aaKnown RBP19.46■□□□□ 0.71
TP53-208ENST00000504290 SCRIBQ14160 1630 aa19.45■□□□□ 0.7
TP53-208ENST00000504290 FOXD1Q16676 465 aa19.39■□□□□ 0.69
TP53-208ENST00000504290 SLC4A1APQ9BWU0 796 aaKnown RBP19.36■□□□□ 0.69
TP53-208ENST00000504290 RB1CC1Q8TDY2 1594 aa19.31■□□□□ 0.68
TP53-208ENST00000504290 RSF1Q96T23 1441 aaPredicted RBP19.05■□□□□ 0.64
TP53-208ENST00000504290 TRIM26Q12899 539 aaPredicted RBP19.05■□□□□ 0.64
TP53-208ENST00000504290 MYT1Q01538 1121 aa19.03■□□□□ 0.64
TP53-208ENST00000504290 PPP4R3CPQ6ZMV5 832 aa19.03■□□□□ 0.64
TP53-208ENST00000504290 ZEB1P37275 1124 aaPredicted RBP19.03■□□□□ 0.64
TP53-208ENST00000504290 SCAF1Q9H7N4 1312 aaKnown RBP18.97■□□□□ 0.63
TP53-208ENST00000504290 UNC13AQ9UPW8 1703 aa18.96■□□□□ 0.63
TP53-208ENST00000504290 CECR2Q9BXF3 1484 aa18.88■□□□□ 0.61
TP53-208ENST00000504290 MROH2BQ7Z745 1585 aa18.84■□□□□ 0.61
TP53-208ENST00000504290 BAZ1AQ9NRL2 1556 aaPredicted RBP18.82■□□□□ 0.6
TP53-208ENST00000504290 LOC105371045A0A1W2PR82 267 aa18.79■□□□□ 0.6
TP53-208ENST00000504290 ZBTB22O15209 634 aa18.74■□□□□ 0.59
TP53-208ENST00000504290 WIZO95785 1651 aa18.73■□□□□ 0.59
TP53-208ENST00000504290 RTN4Q9NQC3 1192 aaKnown RBP18.73■□□□□ 0.59
TP53-208ENST00000504290 NPM3O75607 178 aaKnown RBP18.71■□□□□ 0.59
TP53-208ENST00000504290 NCBP3Q53F19 620 aaKnown RBP18.71■□□□□ 0.58
TP53-208ENST00000504290 BICRAQ9NZM4 1560 aa18.69■□□□□ 0.58
TP53-208ENST00000504290 SMARCA4P51532 1647 aa18.69■□□□□ 0.58
TP53-208ENST00000504290 ACIN1Q9UKV3 1341 aaKnown RBP18.57■□□□□ 0.56
TP53-208ENST00000504290 PIAS4Q8N2W9 510 aaPredicted RBP18.57■□□□□ 0.56
TP53-208ENST00000504290 TOP2AP11388 1531 aaKnown RBP18.57■□□□□ 0.56
TP53-208ENST00000504290 AMER1Q5JTC6 1135 aaPredicted RBP18.47■□□□□ 0.55
TP53-208ENST00000504290 PABPN1Q86U42 306 aaKnown RBP eCLIP18.46■□□□□ 0.55
TP53-208ENST00000504290 PEG3Q9GZU2 1588 aa18.45■□□□□ 0.54
TP53-208ENST00000504290 EIF4G1Q04637 1599 aaKnown RBP18.44■□□□□ 0.54
TP53-208ENST00000504290 NEUROD1Q13562 356 aa18.43■□□□□ 0.54
TP53-208ENST00000504290 SMARCA2P51531 1590 aa18.4■□□□□ 0.54
TP53-208ENST00000504290 CENPBP07199 599 aaPredicted RBP18.39■□□□□ 0.53
TP53-208ENST00000504290 TRIM41Q8WV44 630 aa18.38■□□□□ 0.53
TP53-208ENST00000504290 CCDC88BA6NC98 1476 aa18.35■□□□□ 0.53
TP53-208ENST00000504290 GTF3C3Q9Y5Q9 886 aa18.35■□□□□ 0.53
TP53-208ENST00000504290 ATAD2BQ9ULI0 1458 aa18.25■□□□□ 0.51
TP53-208ENST00000504290 DIEXFQ68CQ4 756 aaKnown RBP18.19■□□□□ 0.5
TP53-208ENST00000504290 BAZ1BQ9UIG0 1483 aaKnown RBP18.18■□□□□ 0.5
TP53-208ENST00000504290 CNKSR2Q8WXI2 1034 aa18.11■□□□□ 0.49
TP53-208ENST00000504290 CCER1Q8TC90 406 aaPredicted RBP18.1■□□□□ 0.49
TP53-208ENST00000504290 ABCC8Q09428 1581 aa18.09■□□□□ 0.49
TP53-208ENST00000504290 HMGXB3Q12766 1538 aa18.08■□□□□ 0.48
TP53-208ENST00000504290 FOXD4L1Q9NU39 408 aa18.05■□□□□ 0.48
TP53-208ENST00000504290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.05■□□□□ 0.48
TP53-208ENST00000504290 NCAPD3P42695 1498 aa18.03■□□□□ 0.48
TP53-208ENST00000504290 FAM9AQ8IZU1 332 aaPredicted RBP18.01■□□□□ 0.47
TP53-208ENST00000504290 EEA1Q15075 1411 aa17.94■□□□□ 0.46
TP53-208ENST00000504290 WRNQ14191 1432 aaPredicted RBP eCLIP17.93■□□□□ 0.46
TP53-208ENST00000504290 TTBK1Q5TCY1 1321 aaPredicted RBP17.91■□□□□ 0.46
TP53-208ENST00000504290 ZNF316A6NFI3 1004 aaPredicted RBP17.87■□□□□ 0.45
TP53-208ENST00000504290 SYNJ1O43426 1573 aa17.86■□□□□ 0.45
TP53-208ENST00000504290 SOGA1O94964 1423 aa17.81■□□□□ 0.44
TP53-208ENST00000504290 PRDM2Q13029 1718 aa17.78■□□□□ 0.44
TP53-208ENST00000504290 TOP2BQ02880 1626 aa17.78■□□□□ 0.44
TP53-208ENST00000504290 BIVM-ERCC5R4GMW8 1640 aa17.78■□□□□ 0.44
TP53-208ENST00000504290 CFTRP13569 1480 aa17.74■□□□□ 0.43
TP53-208ENST00000504290 CC2D2AQ9P2K1 1620 aa17.73■□□□□ 0.43
TP53-208ENST00000504290 YTHDC1Q96MU7 727 aaKnown RBP17.73■□□□□ 0.43
TP53-208ENST00000504290 CLSPNQ9HAW4 1339 aa17.72■□□□□ 0.43
TP53-208ENST00000504290 RUSC2Q8N2Y8 1516 aa17.72■□□□□ 0.43
TP53-208ENST00000504290 KIF21BO75037 1637 aa17.7■□□□□ 0.42
TP53-208ENST00000504290 TNIKQ9UKE5 1360 aa17.7■□□□□ 0.42
TP53-208ENST00000504290 GOLGA3Q08378 1498 aa17.69■□□□□ 0.42
TP53-208ENST00000504290 MIER1Q8N108 512 aa17.66■□□□□ 0.42
TP53-208ENST00000504290 MAPK8IP2Q13387 824 aaPredicted RBP17.66■□□□□ 0.42
TP53-208ENST00000504290 DNAJC5BQ9UF47 199 aa17.66■□□□□ 0.42
TP53-208ENST00000504290 CEP164Q9UPV0 1460 aa17.65■□□□□ 0.42
TP53-208ENST00000504290 CEP162Q5TB80 1403 aa17.62■□□□□ 0.41
TP53-208ENST00000504290 CUX1P39880 1505 aa17.61■□□□□ 0.41
TP53-208ENST00000504290 FKBP8Q14318 412 aa17.6■□□□□ 0.41
TP53-208ENST00000504290 CADPSQ9ULU8 1353 aa17.58■□□□□ 0.4
TP53-208ENST00000504290 ANP32EQ9BTT0 268 aa17.57■□□□□ 0.4
TP53-208ENST00000504290 UBTFP17480 764 aaKnown RBP17.53■□□□□ 0.4
TP53-208ENST00000504290 BCL11AQ9H165 835 aa17.51■□□□□ 0.39
TP53-208ENST00000504290 ERICH3Q5RHP9 1530 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms