RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 KRTAP16-1A8MUX0 517 aa2.97□□□□□ -1.93
CLDND1-208ENST00000503004 ACYP2P14621 99 aa2.96□□□□□ -1.94
CLDND1-208ENST00000503004 DMAC1Q96GE9 116 aa2.96□□□□□ -1.94
CLDND1-208ENST00000503004 KRTAP13-2Q52LG2 175 aa2.95□□□□□ -1.94
CLDND1-208ENST00000503004 NDUFAF8A1L188 74 aa2.95□□□□□ -1.94
CLDND1-208ENST00000503004 Q6ZSA8 131 aa2.94□□□□□ -1.94
CLDND1-208ENST00000503004 SSBP3-AS1Q7Z2R9 100 aa2.94□□□□□ -1.94
CLDND1-208ENST00000503004 LINC00304Q8N9R0 145 aa2.94□□□□□ -1.94
CLDND1-208ENST00000503004 DYNC1H1Q14204 4646 aaKnown RBP2.93□□□□□ -1.94
CLDND1-208ENST00000503004 SPINK1P00995 79 aa2.93□□□□□ -1.94
CLDND1-208ENST00000503004 C20orf166-AS1Q96NR2 134 aa2.93□□□□□ -1.94
CLDND1-208ENST00000503004 KMT2CQ8NEZ4 4911 aaKnown RBP2.93□□□□□ -1.94
CLDND1-208ENST00000503004 KRTAP1-4P0C5Y4 121 aa2.92□□□□□ -1.94
CLDND1-208ENST00000503004 DMBT1Q9UGM3 2413 aaPredicted RBP2.92□□□□□ -1.94
CLDND1-208ENST00000503004 KRTAP13-3Q3SY46 172 aa2.91□□□□□ -1.94
CLDND1-208ENST00000503004 SMR3BP02814 79 aaPredicted RBP2.89□□□□□ -1.95
CLDND1-208ENST00000503004 APOBP04114 4563 aaKnown RBP2.88□□□□□ -1.95
CLDND1-208ENST00000503004 KRTAP15-1Q3LI76 137 aa2.88□□□□□ -1.95
CLDND1-208ENST00000503004 CAMK2N1Q7Z7J9 78 aa2.88□□□□□ -1.95
CLDND1-208ENST00000503004 TYMSOSQ8TAI1 123 aa2.88□□□□□ -1.95
CLDND1-208ENST00000503004 IGKV2D-30A0A075B6S6 120 aa2.87□□□□□ -1.95
CLDND1-208ENST00000503004 H0YAA0 97 aa2.87□□□□□ -1.95
CLDND1-208ENST00000503004 IGKV2-30P06310 120 aa2.87□□□□□ -1.95
CLDND1-208ENST00000503004 SPINT4Q6UDR6 99 aa2.87□□□□□ -1.95
CLDND1-208ENST00000503004 LUZP6Q538Z0 58 aa2.87□□□□□ -1.95
CLDND1-208ENST00000503004 RYR2Q92736 4967 aa2.86□□□□□ -1.95
CLDND1-208ENST00000503004 KRTAP3-1Q9BYR8 98 aa2.86□□□□□ -1.95
CLDND1-208ENST00000503004 LRP1Q07954 4544 aaKnown RBP2.85□□□□□ -1.95
CLDND1-208ENST00000503004 Q8N1X5 172 aa2.84□□□□□ -1.95
CLDND1-208ENST00000503004 MYCBP2O75592 4640 aa2.83□□□□□ -1.96
CLDND1-208ENST00000503004 TPRXLQ17RH7 258 aa2.82□□□□□ -1.96
CLDND1-208ENST00000503004 PKHD1L1Q86WI1 4243 aa2.82□□□□□ -1.96
CLDND1-208ENST00000503004 KRTAP4-12Q9BQ66 201 aa2.82□□□□□ -1.96
CLDND1-208ENST00000503004 C9orf92A6NGG3 77 aa2.81□□□□□ -1.96
CLDND1-208ENST00000503004 RYR3Q15413 4870 aa2.81□□□□□ -1.96
CLDND1-208ENST00000503004 K7ERS5 55 aa2.81□□□□□ -1.96
CLDND1-208ENST00000503004 A0A1B0GVY2 172 aa2.8□□□□□ -1.96
CLDND1-208ENST00000503004 KRTAP10-4P60372 401 aaPredicted RBP2.79□□□□□ -1.96
CLDND1-208ENST00000503004 HSPG2P98160 4391 aa2.78□□□□□ -1.96
CLDND1-208ENST00000503004 A0A1B0GU33 70 aa2.78□□□□□ -1.97
CLDND1-208ENST00000503004 KIAA1109Q2LD37 5005 aa2.77□□□□□ -1.97
CLDND1-208ENST00000503004 C10orf95Q9H7T3 257 aa2.77□□□□□ -1.97
CLDND1-208ENST00000503004 FAT3Q8TDW7 4589 aa2.77□□□□□ -1.97
CLDND1-208ENST00000503004 RPS29P62273 56 aaKnown RBP2.77□□□□□ -1.97
CLDND1-208ENST00000503004 TNXBP22105 4242 aa2.76□□□□□ -1.97
CLDND1-208ENST00000503004 H1FX-AS1Q4G0G2 97 aa2.74□□□□□ -1.97
CLDND1-208ENST00000503004 RYR1P21817 5038 aa2.73□□□□□ -1.97
CLDND1-208ENST00000503004 A0A0D9SG42 100 aa2.73□□□□□ -1.97
CLDND1-208ENST00000503004 LPAP08519 4548 aa2.72□□□□□ -1.97
CLDND1-208ENST00000503004 EPPK1P58107 5090 aaKnown RBP2.71□□□□□ -1.97
CLDND1-208ENST00000503004 KRTAP4-11Q9BYQ6 195 aa2.71□□□□□ -1.98
CLDND1-208ENST00000503004 Q5VSD8 79 aa2.7□□□□□ -1.98
CLDND1-208ENST00000503004 LRP2P98164 4655 aa2.69□□□□□ -1.98
CLDND1-208ENST00000503004 COX6B2Q6YFQ2 88 aa2.69□□□□□ -1.98
CLDND1-208ENST00000503004 ABCA13Q86UQ4 5058 aa2.68□□□□□ -1.98
CLDND1-208ENST00000503004 KRTAP10-8P60410 259 aa2.67□□□□□ -1.98
CLDND1-208ENST00000503004 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
CLDND1-208ENST00000503004 GPR98Q8WXG9 6306 aa2.65□□□□□ -1.99
CLDND1-208ENST00000503004 BIRC6Q9NR09 4857 aa2.64□□□□□ -1.99
CLDND1-208ENST00000503004 RPL37P61927 97 aaKnown RBP2.64□□□□□ -1.99
CLDND1-208ENST00000503004 KRTAP13-4Q3LI77 160 aa2.63□□□□□ -1.99
CLDND1-208ENST00000503004 MT1HL1P0DM35 61 aa2.62□□□□□ -1.99
CLDND1-208ENST00000503004 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -1.99
CLDND1-208ENST00000503004 MUC2Q02817 5179 aa2.57□□□□□ -2
CLDND1-208ENST00000503004 KRTAP10-6P60371 365 aaPredicted RBP2.57□□□□□ -2
CLDND1-208ENST00000503004 KRTAP12-2P59991 146 aa2.56□□□□□ -2
CLDND1-208ENST00000503004 S4R3F8 94 aa2.56□□□□□ -2
CLDND1-208ENST00000503004 HERC2O95714 4834 aa2.56□□□□□ -2
CLDND1-208ENST00000503004 KRTAP19-1Q8IUB9 90 aa2.54□□□□□ -2
CLDND1-208ENST00000503004 PLAC4Q8WY50 150 aa2.54□□□□□ -2
CLDND1-208ENST00000503004 KRTAP5-9P26371 169 aa2.53□□□□□ -2
CLDND1-208ENST00000503004 MUC17Q685J3 4493 aa2.5□□□□□ -2.01
CLDND1-208ENST00000503004 HERC1Q15751 4861 aa2.49□□□□□ -2.01
CLDND1-208ENST00000503004 KRTAP12-1P59990 96 aa2.49□□□□□ -2.01
CLDND1-208ENST00000503004 KRTAP19-4Q3LI73 84 aa2.49□□□□□ -2.01
CLDND1-208ENST00000503004 PCLOQ9Y6V0 5065 aa2.47□□□□□ -2.01
CLDND1-208ENST00000503004 FAT4Q6V0I7 4981 aa2.45□□□□□ -2.02
CLDND1-208ENST00000503004 KRTAP4-1Q9BYQ7 146 aa2.45□□□□□ -2.02
CLDND1-208ENST00000503004 R4GN34 69 aa2.45□□□□□ -2.02
CLDND1-208ENST00000503004 PRO2289Q9P1D8 64 aa2.44□□□□□ -2.02
CLDND1-208ENST00000503004 M0QZ58 72 aa2.41□□□□□ -2.02
CLDND1-208ENST00000503004 RNF213Q63HN8 5207 aa2.41□□□□□ -2.02
CLDND1-208ENST00000503004 HMCN2Q8NDA2 5059 aa2.4□□□□□ -2.03
CLDND1-208ENST00000503004 KRTAP19-2Q3LHN2 52 aa2.37□□□□□ -2.03
CLDND1-208ENST00000503004 UBR4Q5T4S7 5183 aa2.37□□□□□ -2.03
CLDND1-208ENST00000503004 FLGP20930 4061 aaPredicted RBP2.36□□□□□ -2.03
CLDND1-208ENST00000503004 SPRR5A0A1B0GTR4 108 aa2.32□□□□□ -2.04
CLDND1-208ENST00000503004 LCE5AQ5TCM9 118 aa2.32□□□□□ -2.04
CLDND1-208ENST00000503004 INE1O15225 51 aa2.29□□□□□ -2.04
CLDND1-208ENST00000503004 PP632Q6XCG6 107 aa2.27□□□□□ -2.05
CLDND1-208ENST00000503004 M0R2T5 61 aa2.22□□□□□ -2.05
CLDND1-208ENST00000503004 LCE4AQ5TA78 99 aa2.22□□□□□ -2.05
CLDND1-208ENST00000503004 KRTAP5-4Q6L8H1 288 aa2.22□□□□□ -2.05
CLDND1-208ENST00000503004 MT1HP80294 61 aa2.19□□□□□ -2.06
CLDND1-208ENST00000503004 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
CLDND1-208ENST00000503004 SPRR2GQ9BYE4 73 aa2.17□□□□□ -2.06
CLDND1-208ENST00000503004 MT1FP04733 61 aa2.16□□□□□ -2.06
CLDND1-208ENST00000503004 TNP1P09430 55 aa2.16□□□□□ -2.06
CLDND1-208ENST00000503004 KRTAP10-10P60014 251 aa2.15□□□□□ -2.06
CLDND1-208ENST00000503004 USH2AO75445 5202 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms