RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 Q6ZSA8 131 aa3.27□□□□□ -1.89
SOX2-OT-218ENST00000498731 DNAH6Q9C0G6 4158 aa3.26□□□□□ -1.89
SOX2-OT-218ENST00000498731 TYMSOSQ8TAI1 123 aa3.25□□□□□ -1.89
SOX2-OT-218ENST00000498731 C10orf95Q9H7T3 257 aa3.25□□□□□ -1.89
SOX2-OT-218ENST00000498731 DNAH11Q96DT5 4516 aa3.25□□□□□ -1.89
SOX2-OT-218ENST00000498731 KRTAP19-1Q8IUB9 90 aa3.25□□□□□ -1.89
SOX2-OT-218ENST00000498731 HERC2O95714 4834 aa3.24□□□□□ -1.89
SOX2-OT-218ENST00000498731 SSBP3-AS1Q7Z2R9 100 aa3.24□□□□□ -1.89
SOX2-OT-218ENST00000498731 DNAH5Q8TE73 4624 aa3.24□□□□□ -1.89
SOX2-OT-218ENST00000498731 KRTAP13-1Q8IUC0 172 aa3.24□□□□□ -1.89
SOX2-OT-218ENST00000498731 ABCA13Q86UQ4 5058 aa3.24□□□□□ -1.89
SOX2-OT-218ENST00000498731 TPRXLQ17RH7 258 aa3.23□□□□□ -1.89
SOX2-OT-218ENST00000498731 FAT1Q14517 4588 aa3.23□□□□□ -1.89
SOX2-OT-218ENST00000498731 K7ERS5 55 aa3.23□□□□□ -1.89
SOX2-OT-218ENST00000498731 SPRR1BP22528 89 aa3.23□□□□□ -1.89
SOX2-OT-218ENST00000498731 KRTAP4-5Q9BYR2 181 aa3.22□□□□□ -1.89
SOX2-OT-218ENST00000498731 MYCBP2O75592 4640 aa3.22□□□□□ -1.89
SOX2-OT-218ENST00000498731 DYNC1H1Q14204 4646 aaKnown RBP3.22□□□□□ -1.89
SOX2-OT-218ENST00000498731 KRTAP15-1Q3LI76 137 aa3.21□□□□□ -1.9
SOX2-OT-218ENST00000498731 LRP1BQ9NZR2 4599 aa3.21□□□□□ -1.9
SOX2-OT-218ENST00000498731 HERC1Q15751 4861 aa3.21□□□□□ -1.9
SOX2-OT-218ENST00000498731 SPINT4Q6UDR6 99 aa3.2□□□□□ -1.9
SOX2-OT-218ENST00000498731 APOBP04114 4563 aaKnown RBP3.2□□□□□ -1.9
SOX2-OT-218ENST00000498731 FAT2Q9NYQ8 4349 aa3.2□□□□□ -1.9
SOX2-OT-218ENST00000498731 KRTAP17-1Q9BYP8 105 aa3.2□□□□□ -1.9
SOX2-OT-218ENST00000498731 IGKV2D-30A0A075B6S6 120 aa3.19□□□□□ -1.9
SOX2-OT-218ENST00000498731 A0A1B0GVY2 172 aa3.19□□□□□ -1.9
SOX2-OT-218ENST00000498731 IGKV2-30P06310 120 aa3.19□□□□□ -1.9
SOX2-OT-218ENST00000498731 Q5VSD8 79 aa3.18□□□□□ -1.9
SOX2-OT-218ENST00000498731 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
SOX2-OT-218ENST00000498731 KRTAP9-4Q9BYQ2 154 aa3.18□□□□□ -1.9
SOX2-OT-218ENST00000498731 PKD1P98161 4303 aa3.18□□□□□ -1.9
SOX2-OT-218ENST00000498731 KRTAP13-2Q52LG2 175 aa3.17□□□□□ -1.9
SOX2-OT-218ENST00000498731 CAMK2N1Q7Z7J9 78 aa3.16□□□□□ -1.9
SOX2-OT-218ENST00000498731 VPS13BQ7Z7G8 4022 aa3.16□□□□□ -1.9
SOX2-OT-218ENST00000498731 C9orf92A6NGG3 77 aa3.15□□□□□ -1.91
SOX2-OT-218ENST00000498731 HSPG2P98160 4391 aa3.14□□□□□ -1.91
SOX2-OT-218ENST00000498731 KRTAP1-4P0C5Y4 121 aa3.12□□□□□ -1.91
SOX2-OT-218ENST00000498731 A0A1B0GU33 70 aa3.11□□□□□ -1.91
SOX2-OT-218ENST00000498731 LRP1Q07954 4544 aaKnown RBP3.11□□□□□ -1.91
SOX2-OT-218ENST00000498731 KRTAP4-8A0A0G2JLE6 195 aa3.11□□□□□ -1.91
SOX2-OT-218ENST00000498731 FAT3Q8TDW7 4589 aa3.1□□□□□ -1.91
SOX2-OT-218ENST00000498731 KRTAP13-4Q3LI77 160 aa3.09□□□□□ -1.91
SOX2-OT-218ENST00000498731 H1FX-AS1Q4G0G2 97 aa3.09□□□□□ -1.92
SOX2-OT-218ENST00000498731 UBR4Q5T4S7 5183 aa3.09□□□□□ -1.92
SOX2-OT-218ENST00000498731 RNF213Q63HN8 5207 aa3.08□□□□□ -1.92
SOX2-OT-218ENST00000498731 A0A0D9SG42 100 aa3.07□□□□□ -1.92
SOX2-OT-218ENST00000498731 COX6B2Q6YFQ2 88 aa3.07□□□□□ -1.92
SOX2-OT-218ENST00000498731 LCE3BQ5TA77 95 aa3.05□□□□□ -1.92
SOX2-OT-218ENST00000498731 KRTAP4-7Q9BYR0 210 aa3.02□□□□□ -1.93
SOX2-OT-218ENST00000498731 LRP2P98164 4655 aa3.02□□□□□ -1.93
SOX2-OT-218ENST00000498731 KRTAP10-4P60372 401 aaPredicted RBP2.99□□□□□ -1.93
SOX2-OT-218ENST00000498731 KRTAP12-2P59991 146 aa2.98□□□□□ -1.93
SOX2-OT-218ENST00000498731 LCE1DQ5T752 114 aa2.98□□□□□ -1.93
SOX2-OT-218ENST00000498731 KRTAP10-6P60371 365 aaPredicted RBP2.98□□□□□ -1.93
SOX2-OT-218ENST00000498731 LPAP08519 4548 aa2.97□□□□□ -1.93
SOX2-OT-218ENST00000498731 KRTAP4-9Q9BYQ8 210 aa2.97□□□□□ -1.93
SOX2-OT-218ENST00000498731 KRTAP10-8P60410 259 aa2.97□□□□□ -1.93
SOX2-OT-218ENST00000498731 R4GN34 69 aa2.97□□□□□ -1.93
SOX2-OT-218ENST00000498731 MUC2Q02817 5179 aa2.96□□□□□ -1.93
SOX2-OT-218ENST00000498731 RPL37P61927 97 aaKnown RBP2.96□□□□□ -1.94
SOX2-OT-218ENST00000498731 RPS29P62273 56 aaKnown RBP2.93□□□□□ -1.94
SOX2-OT-218ENST00000498731 S4R3F8 94 aa2.91□□□□□ -1.94
SOX2-OT-218ENST00000498731 KRTAP4-2Q9BYR5 136 aa2.91□□□□□ -1.94
SOX2-OT-218ENST00000498731 HMCN2Q8NDA2 5059 aa2.91□□□□□ -1.94
SOX2-OT-218ENST00000498731 MT1HL1P0DM35 61 aa2.89□□□□□ -1.95
SOX2-OT-218ENST00000498731 FSIP2Q5CZC0 6907 aa2.87□□□□□ -1.95
SOX2-OT-218ENST00000498731 KRTAP9-7A8MTY7 169 aa2.87□□□□□ -1.95
SOX2-OT-218ENST00000498731 PKHD1L1Q86WI1 4243 aa2.87□□□□□ -1.95
SOX2-OT-218ENST00000498731 KRTAP12-1P59990 96 aa2.86□□□□□ -1.95
SOX2-OT-218ENST00000498731 LCE4AQ5TA78 99 aa2.85□□□□□ -1.95
SOX2-OT-218ENST00000498731 PRO2289Q9P1D8 64 aa2.85□□□□□ -1.95
SOX2-OT-218ENST00000498731 PLAC4Q8WY50 150 aa2.84□□□□□ -1.95
SOX2-OT-218ENST00000498731 KRTAP9-3Q9BYQ3 159 aa2.84□□□□□ -1.96
SOX2-OT-218ENST00000498731 KRTAP19-4Q3LI73 84 aa2.83□□□□□ -1.96
SOX2-OT-218ENST00000498731 KRTAP4-11Q9BYQ6 195 aa2.83□□□□□ -1.96
SOX2-OT-218ENST00000498731 TNXBP22105 4242 aa2.82□□□□□ -1.96
SOX2-OT-218ENST00000498731 FAT4Q6V0I7 4981 aa2.81□□□□□ -1.96
SOX2-OT-218ENST00000498731 LCE5AQ5TCM9 118 aa2.79□□□□□ -1.96
SOX2-OT-218ENST00000498731 KRTAP5-3Q6L8H2 238 aa2.71□□□□□ -1.97
SOX2-OT-218ENST00000498731 KRTAP9-8Q9BYQ0 159 aa2.7□□□□□ -1.98
SOX2-OT-218ENST00000498731 M0R2T5 61 aa2.69□□□□□ -1.98
SOX2-OT-218ENST00000498731 KRTAP4-1Q9BYQ7 146 aa2.67□□□□□ -1.98
SOX2-OT-218ENST00000498731 M0QZ58 72 aa2.64□□□□□ -1.99
SOX2-OT-218ENST00000498731 SPRR5A0A1B0GTR4 108 aa2.56□□□□□ -2
SOX2-OT-218ENST00000498731 USH2AO75445 5202 aa2.55□□□□□ -2
SOX2-OT-218ENST00000498731 MUC17Q685J3 4493 aa2.52□□□□□ -2.01
SOX2-OT-218ENST00000498731 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
SOX2-OT-218ENST00000498731 KRTAP10-10P60014 251 aa2.49□□□□□ -2.01
SOX2-OT-218ENST00000498731 KRTAP2-2Q9BYT5 123 aa2.49□□□□□ -2.01
SOX2-OT-218ENST00000498731 MT1HP80294 61 aa2.48□□□□□ -2.01
SOX2-OT-218ENST00000498731 INE1O15225 51 aa2.48□□□□□ -2.01
SOX2-OT-218ENST00000498731 KRTAP19-2Q3LHN2 52 aa2.46□□□□□ -2.02
SOX2-OT-218ENST00000498731 PP632Q6XCG6 107 aa2.43□□□□□ -2.02
SOX2-OT-218ENST00000498731 FLGP20930 4061 aaPredicted RBP2.41□□□□□ -2.02
SOX2-OT-218ENST00000498731 SYNE2Q8WXH0 6885 aaKnown RBP2.41□□□□□ -2.02
SOX2-OT-218ENST00000498731 LCE3CQ5T5A8 94 aa2.4□□□□□ -2.03
SOX2-OT-218ENST00000498731 CRCT1Q9UGL9 99 aa2.39□□□□□ -2.03
SOX2-OT-218ENST00000498731 SSPOA2VEC9 5147 aa2.38□□□□□ -2.03
SOX2-OT-218ENST00000498731 MT1FP04733 61 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms