RNA–Protein interactions for RNA: ENST00000498524.5

ANKRD28-213, Transcript of ankyrin repeat domain 28, humanhuman

TSL 2

Gene ANKRD28, Length 4,289 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-213ENST00000498524 FAT2Q9NYQ8 4349 aa2.17□□□□□ -2.06
ANKRD28-213ENST00000498524 DNAH1Q9P2D7 4330 aa2.17□□□□□ -2.06
ANKRD28-213ENST00000498524 FAT3Q8TDW7 4589 aa2.17□□□□□ -2.06
ANKRD28-213ENST00000498524 KRTAP13-3Q3SY46 172 aa2.16□□□□□ -2.06
ANKRD28-213ENST00000498524 MT1HL1P0DM35 61 aa2.16□□□□□ -2.06
ANKRD28-213ENST00000498524 RPL37P61927 97 aaKnown RBP2.16□□□□□ -2.06
ANKRD28-213ENST00000498524 KMT2AQ03164 3969 aa2.16□□□□□ -2.06
ANKRD28-213ENST00000498524 ALMS1Q8TCU4 4167 aa2.16□□□□□ -2.06
ANKRD28-213ENST00000498524 H1FX-AS1Q4G0G2 97 aa2.14□□□□□ -2.07
ANKRD28-213ENST00000498524 PRO2289Q9P1D8 64 aa2.14□□□□□ -2.07
ANKRD28-213ENST00000498524 KRTAP13-2Q52LG2 175 aa2.14□□□□□ -2.07
ANKRD28-213ENST00000498524 VPS13DQ5THJ4 4388 aa2.13□□□□□ -2.07
ANKRD28-213ENST00000498524 SRRM2Q9UQ35 2752 aaKnown RBP2.13□□□□□ -2.07
ANKRD28-213ENST00000498524 KRTAP4-12Q9BQ66 201 aa2.12□□□□□ -2.07
ANKRD28-213ENST00000498524 KRTAP1-4P0C5Y4 121 aa2.11□□□□□ -2.07
ANKRD28-213ENST00000498524 A0A0D9SG42 100 aa2.11□□□□□ -2.07
ANKRD28-213ENST00000498524 KRTAP15-1Q3LI76 137 aa2.11□□□□□ -2.07
ANKRD28-213ENST00000498524 TRRAPQ9Y4A5 3859 aa2.1□□□□□ -2.07
ANKRD28-213ENST00000498524 H0YAA0 97 aa2.09□□□□□ -2.08
ANKRD28-213ENST00000498524 KRTAP3-1Q9BYR8 98 aa2.08□□□□□ -2.08
ANKRD28-213ENST00000498524 LCE2CQ5TA81 110 aa2.08□□□□□ -2.08
ANKRD28-213ENST00000498524 KRTAP10-10P60014 251 aa2.08□□□□□ -2.08
ANKRD28-213ENST00000498524 KRTAP4-9Q9BYQ8 210 aa2.07□□□□□ -2.08
ANKRD28-213ENST00000498524 PLAC4Q8WY50 150 aa2.07□□□□□ -2.08
ANKRD28-213ENST00000498524 S4R3F8 94 aa2.07□□□□□ -2.08
ANKRD28-213ENST00000498524 COL7A1Q02388 2944 aa2.07□□□□□ -2.08
ANKRD28-213ENST00000498524 KRTAP10-4P60372 401 aaPredicted RBP2.07□□□□□ -2.08
ANKRD28-213ENST00000498524 LCE2AQ5TA79 106 aaPredicted RBP2.05□□□□□ -2.08
ANKRD28-213ENST00000498524 DNAH11Q96DT5 4516 aa2.05□□□□□ -2.08
ANKRD28-213ENST00000498524 CSMD3Q7Z407 3707 aa2.05□□□□□ -2.08
ANKRD28-213ENST00000498524 VPS13BQ7Z7G8 4022 aa2.04□□□□□ -2.08
ANKRD28-213ENST00000498524 CRCT1Q9UGL9 99 aa2.03□□□□□ -2.08
ANKRD28-213ENST00000498524 TNXBP22105 4242 aa2.03□□□□□ -2.08
ANKRD28-213ENST00000498524 DNAH9Q9NYC9 4486 aa2.03□□□□□ -2.08
ANKRD28-213ENST00000498524 DNAH17Q9UFH2 4485 aa2.02□□□□□ -2.09
ANKRD28-213ENST00000498524 INE1O15225 51 aa2.02□□□□□ -2.09
ANKRD28-213ENST00000498524 HMCN1Q96RW7 5635 aa2.01□□□□□ -2.09
ANKRD28-213ENST00000498524 LRP1BQ9NZR2 4599 aa2.01□□□□□ -2.09
ANKRD28-213ENST00000498524 LCE2BO14633 110 aa2□□□□□ -2.09
ANKRD28-213ENST00000498524 PKD1P98161 4303 aa2□□□□□ -2.09
ANKRD28-213ENST00000498524 PCLOQ9Y6V0 5065 aa1.99□□□□□ -2.09
ANKRD28-213ENST00000498524 M0QZ58 72 aa1.99□□□□□ -2.09
ANKRD28-213ENST00000498524 PP632Q6XCG6 107 aa1.99□□□□□ -2.09
ANKRD28-213ENST00000498524 HERC2O95714 4834 aa1.98□□□□□ -2.09
ANKRD28-213ENST00000498524 LCE1DQ5T752 114 aa1.97□□□□□ -2.09
ANKRD28-213ENST00000498524 LCE3BQ5TA77 95 aa1.97□□□□□ -2.09
ANKRD28-213ENST00000498524 DNAH2Q9P225 4427 aa1.97□□□□□ -2.09
ANKRD28-213ENST00000498524 LORP23490 312 aaPredicted RBP1.97□□□□□ -2.09
ANKRD28-213ENST00000498524 C10orf95Q9H7T3 257 aa1.96□□□□□ -2.1
ANKRD28-213ENST00000498524 DNAH10Q8IVF4 4471 aa1.95□□□□□ -2.1
ANKRD28-213ENST00000498524 DNAH8Q96JB1 4490 aa1.95□□□□□ -2.1
ANKRD28-213ENST00000498524 RYR3Q15413 4870 aa1.94□□□□□ -2.1
ANKRD28-213ENST00000498524 HSPG2P98160 4391 aa1.93□□□□□ -2.1
ANKRD28-213ENST00000498524 KRTAP10-6P60371 365 aaPredicted RBP1.92□□□□□ -2.1
ANKRD28-213ENST00000498524 RYR2Q92736 4967 aa1.92□□□□□ -2.1
ANKRD28-213ENST00000498524 RYR1P21817 5038 aa1.92□□□□□ -2.1
ANKRD28-213ENST00000498524 KRTAP13-4Q3LI77 160 aa1.91□□□□□ -2.1
ANKRD28-213ENST00000498524 KRTAP12-2P59991 146 aa1.91□□□□□ -2.1
ANKRD28-213ENST00000498524 SACSQ9NZJ4 4579 aa1.9□□□□□ -2.11
ANKRD28-213ENST00000498524 KRTAP12-1P59990 96 aa1.89□□□□□ -2.11
ANKRD28-213ENST00000498524 PLECQ15149 4684 aaKnown RBP1.89□□□□□ -2.11
ANKRD28-213ENST00000498524 KRTAP9-7A8MTY7 169 aa1.89□□□□□ -2.11
ANKRD28-213ENST00000498524 KRTAP4-11Q9BYQ6 195 aa1.89□□□□□ -2.11
ANKRD28-213ENST00000498524 KIAA1109Q2LD37 5005 aa1.89□□□□□ -2.11
ANKRD28-213ENST00000498524 DYNC1H1Q14204 4646 aaKnown RBP1.88□□□□□ -2.11
ANKRD28-213ENST00000498524 KRTAP19-4Q3LI73 84 aa1.88□□□□□ -2.11
ANKRD28-213ENST00000498524 KRTAP19-1Q8IUB9 90 aa1.87□□□□□ -2.11
ANKRD28-213ENST00000498524 TNP1P09430 55 aa1.87□□□□□ -2.11
ANKRD28-213ENST00000498524 MT1HP80294 61 aa1.87□□□□□ -2.11
ANKRD28-213ENST00000498524 DNAH5Q8TE73 4624 aa1.84□□□□□ -2.11
ANKRD28-213ENST00000498524 STARD9Q9P2P6 4700 aa1.83□□□□□ -2.12
ANKRD28-213ENST00000498524 ABCA13Q86UQ4 5058 aa1.83□□□□□ -2.12
ANKRD28-213ENST00000498524 FAT1Q14517 4588 aa1.83□□□□□ -2.12
ANKRD28-213ENST00000498524 HERC1Q15751 4861 aa1.82□□□□□ -2.12
ANKRD28-213ENST00000498524 HYDINQ4G0P3 5121 aa1.81□□□□□ -2.12
ANKRD28-213ENST00000498524 KRTAP20-1Q3LI63 56 aa1.8□□□□□ -2.12
ANKRD28-213ENST00000498524 KMT2CQ8NEZ4 4911 aaKnown RBP1.79□□□□□ -2.12
ANKRD28-213ENST00000498524 MYCBP2O75592 4640 aa1.78□□□□□ -2.12
ANKRD28-213ENST00000498524 APOBP04114 4563 aaKnown RBP1.78□□□□□ -2.12
ANKRD28-213ENST00000498524 KRTAP6-3Q3LI67 103 aa1.77□□□□□ -2.13
ANKRD28-213ENST00000498524 MUC17Q685J3 4493 aa1.76□□□□□ -2.13
ANKRD28-213ENST00000498524 FLGP20930 4061 aaPredicted RBP1.75□□□□□ -2.13
ANKRD28-213ENST00000498524 KRTAP8-1Q8IUC2 63 aa1.75□□□□□ -2.13
ANKRD28-213ENST00000498524 MT2AP02795 61 aa1.75□□□□□ -2.13
ANKRD28-213ENST00000498524 EPPK1P58107 5090 aaKnown RBP1.74□□□□□ -2.13
ANKRD28-213ENST00000498524 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.73□□□□□ -2.13
ANKRD28-213ENST00000498524 KRTAP4-1Q9BYQ7 146 aa1.72□□□□□ -2.13
ANKRD28-213ENST00000498524 KRTAP2-3P0C7H8 128 aa1.72□□□□□ -2.13
ANKRD28-213ENST00000498524 KRTAP2-4Q9BYR9 128 aa1.72□□□□□ -2.13
ANKRD28-213ENST00000498524 SPRR2EP22531 72 aa1.71□□□□□ -2.14
ANKRD28-213ENST00000498524 SPRR2BP35325 72 aa1.71□□□□□ -2.14
ANKRD28-213ENST00000498524 SPRR2AP35326 72 aa1.71□□□□□ -2.14
ANKRD28-213ENST00000498524 KRTAP19-6Q3LI70 58 aa1.71□□□□□ -2.14
ANKRD28-213ENST00000498524 SPRR2FQ96RM1 72 aa1.69□□□□□ -2.14
ANKRD28-213ENST00000498524 SPRR2DP22532 72 aa1.68□□□□□ -2.14
ANKRD28-213ENST00000498524 MT3P25713 68 aa1.68□□□□□ -2.14
ANKRD28-213ENST00000498524 UBR4Q5T4S7 5183 aa1.67□□□□□ -2.14
ANKRD28-213ENST00000498524 MT1FP04733 61 aa1.67□□□□□ -2.14
ANKRD28-213ENST00000498524 LRP1Q07954 4544 aaKnown RBP1.64□□□□□ -2.15
ANKRD28-213ENST00000498524 RNF213Q63HN8 5207 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms