RNA–Protein interactions for RNA: ENST00000498524.5

ANKRD28-213, Transcript of ankyrin repeat domain 28, humanhuman

TSL 2

Gene ANKRD28, Length 4,289 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-213ENST00000498524 NISCHQ9Y2I1 1504 aa7.91□□□□□ -1.14
ANKRD28-213ENST00000498524 DCAF8L2P0C7V8 631 aa7.44□□□□□ -1.22
ANKRD28-213ENST00000498524 ABCC9O60706 1549 aa7.32□□□□□ -1.24
ANKRD28-213ENST00000498524 SLC24A1O60721 1099 aa7.08□□□□□ -1.28
ANKRD28-213ENST00000498524 CCDC180Q9P1Z9 1646 aa7.01□□□□□ -1.29
ANKRD28-213ENST00000498524 RB1CC1Q8TDY2 1594 aa6.99□□□□□ -1.29
ANKRD28-213ENST00000498524 PABPN1Q86U42 306 aaKnown RBP eCLIP6.9□□□□□ -1.3
ANKRD28-213ENST00000498524 NACADO15069 1562 aa6.87□□□□□ -1.31
ANKRD28-213ENST00000498524 FAM9AQ8IZU1 332 aaPredicted RBP6.79□□□□□ -1.32
ANKRD28-213ENST00000498524 SHROOM4Q9ULL8 1493 aa6.73□□□□□ -1.33
ANKRD28-213ENST00000498524 ERCC6Q03468 1493 aa6.7□□□□□ -1.34
ANKRD28-213ENST00000498524 CECR2Q9BXF3 1484 aa6.67□□□□□ -1.34
ANKRD28-213ENST00000498524 AEBP2Q6ZN18 517 aaPredicted RBP6.64□□□□□ -1.35
ANKRD28-213ENST00000498524 EHMT2Q96KQ7 1210 aa6.64□□□□□ -1.35
ANKRD28-213ENST00000498524 MYO15BQ96JP2 1530 aa6.63□□□□□ -1.35
ANKRD28-213ENST00000498524 MYT1Q01538 1121 aa6.6□□□□□ -1.35
ANKRD28-213ENST00000498524 DNAJC5Q9H3Z4 198 aa6.58□□□□□ -1.36
ANKRD28-213ENST00000498524 DNAJC5BQ9UF47 199 aa6.57□□□□□ -1.36
ANKRD28-213ENST00000498524 TRIM41Q8WV44 630 aa6.56□□□□□ -1.36
ANKRD28-213ENST00000498524 SCRIBQ14160 1630 aa6.56□□□□□ -1.36
ANKRD28-213ENST00000498524 CHIC1Q5VXU3 224 aa6.51□□□□□ -1.37
ANKRD28-213ENST00000498524 PDS5BQ9NTI5 1447 aa6.5□□□□□ -1.37
ANKRD28-213ENST00000498524 TRHP20396 242 aaPredicted RBP6.5□□□□□ -1.37
ANKRD28-213ENST00000498524 NPM1P06748 294 aaKnown RBP eCLIP6.49□□□□□ -1.37
ANKRD28-213ENST00000498524 TTBK1Q5TCY1 1321 aaPredicted RBP6.49□□□□□ -1.37
ANKRD28-213ENST00000498524 DCAF1Q9Y4B6 1507 aa6.48□□□□□ -1.37
ANKRD28-213ENST00000498524 CUX2O14529 1486 aa6.47□□□□□ -1.37
ANKRD28-213ENST00000498524 OSCARQ8IYS5 282 aa6.46□□□□□ -1.38
ANKRD28-213ENST00000498524 DAXXQ9UER7 740 aaPredicted RBP6.46□□□□□ -1.38
ANKRD28-213ENST00000498524 PELP1Q8IZL8 1130 aaKnown RBP6.44□□□□□ -1.38
ANKRD28-213ENST00000498524 FBLN2P98095 1184 aa6.42□□□□□ -1.38
ANKRD28-213ENST00000498524 ZCCHC6Q5VYS8 1495 aaKnown RBP6.4□□□□□ -1.38
ANKRD28-213ENST00000498524 SMARCA2P51531 1590 aa6.39□□□□□ -1.39
ANKRD28-213ENST00000498524 ERICH6Q7L0X2 663 aa6.38□□□□□ -1.39
ANKRD28-213ENST00000498524 EIF4G1Q04637 1599 aaKnown RBP6.38□□□□□ -1.39
ANKRD28-213ENST00000498524 BAZ1BQ9UIG0 1483 aaKnown RBP6.38□□□□□ -1.39
ANKRD28-213ENST00000498524 CC2D2AQ9P2K1 1620 aa6.37□□□□□ -1.39
ANKRD28-213ENST00000498524 CHMP7Q8WUX9 453 aaPredicted RBP6.33□□□□□ -1.4
ANKRD28-213ENST00000498524 NCAPD3P42695 1498 aa6.29□□□□□ -1.4
ANKRD28-213ENST00000498524 SUPT5HO00267 1087 aaKnown RBP6.29□□□□□ -1.4
ANKRD28-213ENST00000498524 RTN4Q9NQC3 1192 aaKnown RBP6.29□□□□□ -1.4
ANKRD28-213ENST00000498524 NCBP3Q53F19 620 aaKnown RBP6.28□□□□□ -1.4
ANKRD28-213ENST00000498524 AMER1Q5JTC6 1135 aaPredicted RBP6.26□□□□□ -1.41
ANKRD28-213ENST00000498524 BAZ1AQ9NRL2 1556 aaPredicted RBP6.26□□□□□ -1.41
ANKRD28-213ENST00000498524 CADPSQ9ULU8 1353 aa6.26□□□□□ -1.41
ANKRD28-213ENST00000498524 PLPPR3Q6T4P5 718 aa6.25□□□□□ -1.41
ANKRD28-213ENST00000498524 RANGAP1P46060 587 aaPredicted RBP6.25□□□□□ -1.41
ANKRD28-213ENST00000498524 CEP164Q9UPV0 1460 aa6.24□□□□□ -1.41
ANKRD28-213ENST00000498524 ABCC8Q09428 1581 aa6.24□□□□□ -1.41
ANKRD28-213ENST00000498524 CYB5RLQ6IPT4 315 aa6.23□□□□□ -1.41
ANKRD28-213ENST00000498524 MRC2Q9UBG0 1479 aa6.22□□□□□ -1.41
ANKRD28-213ENST00000498524 ATAD2BQ9ULI0 1458 aa6.21□□□□□ -1.42
ANKRD28-213ENST00000498524 BICRAQ9NZM4 1560 aa6.2□□□□□ -1.42
ANKRD28-213ENST00000498524 ESF1Q9H501 851 aaKnown RBP6.19□□□□□ -1.42
ANKRD28-213ENST00000498524 HMGXB3Q12766 1538 aa6.18□□□□□ -1.42
ANKRD28-213ENST00000498524 MYT1LQ9UL68 1186 aa6.18□□□□□ -1.42
ANKRD28-213ENST00000498524 LAMC3Q9Y6N6 1575 aa6.18□□□□□ -1.42
ANKRD28-213ENST00000498524 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.13□□□□□ -1.43
ANKRD28-213ENST00000498524 HRCP23327 699 aa6.13□□□□□ -1.43
ANKRD28-213ENST00000498524 HNRNPUL2Q1KMD3 747 aaKnown RBP6.13□□□□□ -1.43
ANKRD28-213ENST00000498524 IFT140Q96RY7 1462 aa6.12□□□□□ -1.43
ANKRD28-213ENST00000498524 FANCD2Q9BXW9 1451 aa6.12□□□□□ -1.43
ANKRD28-213ENST00000498524 PCGF6Q9BYE7 350 aa6.11□□□□□ -1.43
ANKRD28-213ENST00000498524 ARXQ96QS3 562 aa6.11□□□□□ -1.43
ANKRD28-213ENST00000498524 APLP2Q06481 763 aa6.09□□□□□ -1.43
ANKRD28-213ENST00000498524 FOXD1Q16676 465 aa6.08□□□□□ -1.44
ANKRD28-213ENST00000498524 PRKCSHP14314 528 aaPredicted RBP6.07□□□□□ -1.44
ANKRD28-213ENST00000498524 SMARCA4P51532 1647 aa6.06□□□□□ -1.44
ANKRD28-213ENST00000498524 ARID4BQ4LE39 1312 aaPredicted RBP6.05□□□□□ -1.44
ANKRD28-213ENST00000498524 CARMIL2Q6F5E8 1435 aa6.05□□□□□ -1.44
ANKRD28-213ENST00000498524 CDK11AQ9UQ88 783 aaPredicted RBP6.05□□□□□ -1.44
ANKRD28-213ENST00000498524 SOGA1O94964 1423 aa6.03□□□□□ -1.44
ANKRD28-213ENST00000498524 RSF1Q96T23 1441 aaPredicted RBP6.03□□□□□ -1.44
ANKRD28-213ENST00000498524 FAM69CQ0P6D2 419 aa6.02□□□□□ -1.45
ANKRD28-213ENST00000498524 ZEB1P37275 1124 aaPredicted RBP6.01□□□□□ -1.45
ANKRD28-213ENST00000498524 UNC13AQ9UPW8 1703 aa6□□□□□ -1.45
ANKRD28-213ENST00000498524 KCNA4P22459 653 aa6□□□□□ -1.45
ANKRD28-213ENST00000498524 NESP48681 1621 aa6□□□□□ -1.45
ANKRD28-213ENST00000498524 HOMEZQ8IX15 550 aa5.99□□□□□ -1.45
ANKRD28-213ENST00000498524 DMRT2Q9Y5R5 561 aa5.99□□□□□ -1.45
ANKRD28-213ENST00000498524 ATP1B4Q9UN42 357 aaPredicted RBP5.99□□□□□ -1.45
ANKRD28-213ENST00000498524 WRNQ14191 1432 aaPredicted RBP eCLIP5.99□□□□□ -1.45
ANKRD28-213ENST00000498524 SYNJ1O43426 1573 aa5.98□□□□□ -1.45
ANKRD28-213ENST00000498524 GRIN2BQ13224 1484 aa5.98□□□□□ -1.45
ANKRD28-213ENST00000498524 MROH2BQ7Z745 1585 aa5.97□□□□□ -1.45
ANKRD28-213ENST00000498524 CFTRP13569 1480 aa5.97□□□□□ -1.45
ANKRD28-213ENST00000498524 TULP1O00294 542 aaPredicted RBP5.96□□□□□ -1.45
ANKRD28-213ENST00000498524 EIF5BO60841 1220 aaKnown RBP5.95□□□□□ -1.46
ANKRD28-213ENST00000498524 TRIM26Q12899 539 aaPredicted RBP5.95□□□□□ -1.46
ANKRD28-213ENST00000498524 CSRNP3Q8WYN3 585 aa5.94□□□□□ -1.46
ANKRD28-213ENST00000498524 TDRD9Q8NDG6 1382 aaKnown RBP5.94□□□□□ -1.46
ANKRD28-213ENST00000498524 WDR62O43379 1518 aa5.94□□□□□ -1.46
ANKRD28-213ENST00000498524 JPH4Q96JJ6 628 aa5.94□□□□□ -1.46
ANKRD28-213ENST00000498524 TIMELESSQ9UNS1 1208 aa5.94□□□□□ -1.46
ANKRD28-213ENST00000498524 MAGI1Q96QZ7 1491 aaPredicted RBP5.94□□□□□ -1.46
ANKRD28-213ENST00000498524 POGZQ7Z3K3 1410 aa5.93□□□□□ -1.46
ANKRD28-213ENST00000498524 BCANQ96GW7 911 aa5.93□□□□□ -1.46
ANKRD28-213ENST00000498524 TOP2AP11388 1531 aaKnown RBP5.93□□□□□ -1.46
ANKRD28-213ENST00000498524 PPARGC1BQ86YN6 1023 aaKnown RBP5.92□□□□□ -1.46
ANKRD28-213ENST00000498524 PLEKHD1A6NEE1 506 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms