RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 HRES1P13985 223 aa4.33□□□□□ -1.72
PDZRN3-212ENST00000498048 RPS28P62857 69 aaKnown RBP4.33□□□□□ -1.72
PDZRN3-212ENST00000498048 TPRXLQ17RH7 258 aa4.33□□□□□ -1.72
PDZRN3-212ENST00000498048 LCE5AQ5TCM9 118 aa4.33□□□□□ -1.72
PDZRN3-212ENST00000498048 KRTAP4-7Q9BYR0 210 aa4.32□□□□□ -1.72
PDZRN3-212ENST00000498048 ATP11AUNQ6ZP68 121 aa4.31□□□□□ -1.72
PDZRN3-212ENST00000498048 PCLOQ9Y6V0 5065 aa4.31□□□□□ -1.72
PDZRN3-212ENST00000498048 COA5Q86WW8 74 aa4.29□□□□□ -1.72
PDZRN3-212ENST00000498048 DMAC1Q96GE9 116 aa4.29□□□□□ -1.72
PDZRN3-212ENST00000498048 KRTAP4-9Q9BYQ8 210 aa4.29□□□□□ -1.72
PDZRN3-212ENST00000498048 SMIM26A0A096LP01 95 aa4.26□□□□□ -1.73
PDZRN3-212ENST00000498048 SPINK7P58062 85 aa4.26□□□□□ -1.73
PDZRN3-212ENST00000498048 ACYP2P14621 99 aa4.25□□□□□ -1.73
PDZRN3-212ENST00000498048 C4orf26Q17RF5 130 aa4.24□□□□□ -1.73
PDZRN3-212ENST00000498048 A8MUN3 132 aa4.23□□□□□ -1.73
PDZRN3-212ENST00000498048 CHKB-CPT1BH3BT56 60 aa4.23□□□□□ -1.73
PDZRN3-212ENST00000498048 KRTAP15-1Q3LI76 137 aa4.23□□□□□ -1.73
PDZRN3-212ENST00000498048 MPLKIPQ8TAP9 179 aa4.21□□□□□ -1.74
PDZRN3-212ENST00000498048 LPAP08519 4548 aa4.2□□□□□ -1.74
PDZRN3-212ENST00000498048 KRTAP4-11Q9BYQ6 195 aa4.19□□□□□ -1.74
PDZRN3-212ENST00000498048 SEC61BP60468 96 aaKnown RBP4.18□□□□□ -1.74
PDZRN3-212ENST00000498048 COX6B2Q6YFQ2 88 aa4.18□□□□□ -1.74
PDZRN3-212ENST00000498048 V9GYY9 64 aa4.17□□□□□ -1.74
PDZRN3-212ENST00000498048 LRP2P98164 4655 aa4.17□□□□□ -1.74
PDZRN3-212ENST00000498048 Q1T7F1 81 aa4.16□□□□□ -1.74
PDZRN3-212ENST00000498048 MUC17Q685J3 4493 aa4.14□□□□□ -1.75
PDZRN3-212ENST00000498048 PRR15LQ9BU68 103 aa4.13□□□□□ -1.75
PDZRN3-212ENST00000498048 SPTSSBQ8NFR3 76 aa4.12□□□□□ -1.75
PDZRN3-212ENST00000498048 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
PDZRN3-212ENST00000498048 RBM12B-AS1Q9P1G2 102 aa4.12□□□□□ -1.75
PDZRN3-212ENST00000498048 LINC01558Q9Y6Z2 57 aa4.11□□□□□ -1.75
PDZRN3-212ENST00000498048 PSPHP1O15172 72 aa4.1□□□□□ -1.75
PDZRN3-212ENST00000498048 S4R3F8 94 aa4.09□□□□□ -1.75
PDZRN3-212ENST00000498048 HERC1Q15751 4861 aa4.09□□□□□ -1.76
PDZRN3-212ENST00000498048 Q5VV11 94 aa4.07□□□□□ -1.76
PDZRN3-212ENST00000498048 A0A1B0GU69 56 aa4.06□□□□□ -1.76
PDZRN3-212ENST00000498048 H1FX-AS1Q4G0G2 97 aa4.06□□□□□ -1.76
PDZRN3-212ENST00000498048 HMCN2Q8NDA2 5059 aa4.05□□□□□ -1.76
PDZRN3-212ENST00000498048 LCA10Q71F78 164 aa4.05□□□□□ -1.76
PDZRN3-212ENST00000498048 KRTAP4-1Q9BYQ7 146 aa4.05□□□□□ -1.76
PDZRN3-212ENST00000498048 SEC61GP60059 68 aa4.02□□□□□ -1.77
PDZRN3-212ENST00000498048 A6NED7 52 aa4□□□□□ -1.77
PDZRN3-212ENST00000498048 BRK1Q8WUW1 75 aa4□□□□□ -1.77
PDZRN3-212ENST00000498048 CSAG1Q6PB30 78 aa3.94□□□□□ -1.78
PDZRN3-212ENST00000498048 UQCR11O14957 56 aa3.93□□□□□ -1.78
PDZRN3-212ENST00000498048 KRTAP19-2Q3LHN2 52 aa3.93□□□□□ -1.78
PDZRN3-212ENST00000498048 CDC42SE1Q9NRR8 79 aa3.93□□□□□ -1.78
PDZRN3-212ENST00000498048 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
PDZRN3-212ENST00000498048 PRO0628Q9UI54 55 aa3.91□□□□□ -1.78
PDZRN3-212ENST00000498048 A0A1B0GU33 70 aa3.89□□□□□ -1.79
PDZRN3-212ENST00000498048 A8MU10 97 aa3.89□□□□□ -1.79
PDZRN3-212ENST00000498048 MIR22HGQ0VDD5 57 aa3.89□□□□□ -1.79
PDZRN3-212ENST00000498048 ADM2Q7Z4H4 148 aa3.88□□□□□ -1.79
PDZRN3-212ENST00000498048 FLGP20930 4061 aaPredicted RBP3.87□□□□□ -1.79
PDZRN3-212ENST00000498048 KRTAP10-6P60371 365 aaPredicted RBP3.87□□□□□ -1.79
PDZRN3-212ENST00000498048 RNF213Q63HN8 5207 aa3.86□□□□□ -1.79
PDZRN3-212ENST00000498048 H0YAA0 97 aa3.86□□□□□ -1.79
PDZRN3-212ENST00000498048 P0C880 135 aa3.86□□□□□ -1.79
PDZRN3-212ENST00000498048 SPATA8Q6RVD6 105 aa3.85□□□□□ -1.79
PDZRN3-212ENST00000498048 UBR4Q5T4S7 5183 aa3.82□□□□□ -1.8
PDZRN3-212ENST00000498048 KRTAP13-4Q3LI77 160 aa3.8□□□□□ -1.8
PDZRN3-212ENST00000498048 MUC2Q02817 5179 aa3.8□□□□□ -1.8
PDZRN3-212ENST00000498048 M0R2T5 61 aa3.78□□□□□ -1.8
PDZRN3-212ENST00000498048 MT1HP80294 61 aa3.78□□□□□ -1.8
PDZRN3-212ENST00000498048 A0A0D9SG42 100 aa3.76□□□□□ -1.81
PDZRN3-212ENST00000498048 M0QZ58 72 aa3.76□□□□□ -1.81
PDZRN3-212ENST00000498048 R4GN34 69 aa3.75□□□□□ -1.81
PDZRN3-212ENST00000498048 PMAIP1Q13794 54 aa3.74□□□□□ -1.81
PDZRN3-212ENST00000498048 A6NN06 94 aa3.73□□□□□ -1.81
PDZRN3-212ENST00000498048 K7ERS5 55 aa3.73□□□□□ -1.81
PDZRN3-212ENST00000498048 FAT4Q6V0I7 4981 aa3.72□□□□□ -1.81
PDZRN3-212ENST00000498048 LINC01554Q52M75 96 aa3.7□□□□□ -1.82
PDZRN3-212ENST00000498048 CRIPTQ9P021 101 aa3.68□□□□□ -1.82
PDZRN3-212ENST00000498048 KRTAP12-1P59990 96 aa3.66□□□□□ -1.82
PDZRN3-212ENST00000498048 SPINT4Q6UDR6 99 aa3.66□□□□□ -1.82
PDZRN3-212ENST00000498048 KRTAP12-2P59991 146 aa3.65□□□□□ -1.83
PDZRN3-212ENST00000498048 KTN1-AS1Q86SY8 53 aa3.65□□□□□ -1.83
PDZRN3-212ENST00000498048 MT2AP02795 61 aa3.64□□□□□ -1.83
PDZRN3-212ENST00000498048 MT1FP04733 61 aa3.63□□□□□ -1.83
PDZRN3-212ENST00000498048 KRTAP10-10P60014 251 aa3.61□□□□□ -1.83
PDZRN3-212ENST00000498048 KRTAP9-8Q9BYQ0 159 aa3.61□□□□□ -1.83
PDZRN3-212ENST00000498048 KRTAP5-3Q6L8H2 238 aa3.58□□□□□ -1.84
PDZRN3-212ENST00000498048 SPRR2GQ9BYE4 73 aa3.58□□□□□ -1.84
PDZRN3-212ENST00000498048 ROMO1P60602 79 aa3.56□□□□□ -1.84
PDZRN3-212ENST00000498048 LCE1AQ5T7P2 110 aa3.56□□□□□ -1.84
PDZRN3-212ENST00000498048 CAMK2N1Q7Z7J9 78 aa3.54□□□□□ -1.84
PDZRN3-212ENST00000498048 PRAC1Q96KF2 57 aa3.53□□□□□ -1.84
PDZRN3-212ENST00000498048 PLAC4Q8WY50 150 aa3.5□□□□□ -1.85
PDZRN3-212ENST00000498048 KRTAP19-8Q3LI54 63 aa3.48□□□□□ -1.85
PDZRN3-212ENST00000498048 MT1BP07438 61 aa3.44□□□□□ -1.86
PDZRN3-212ENST00000498048 C10orf95Q9H7T3 257 aa3.44□□□□□ -1.86
PDZRN3-212ENST00000498048 KRTAP25-1Q3LHN0 102 aa3.42□□□□□ -1.86
PDZRN3-212ENST00000498048 TNP1P09430 55 aa3.35□□□□□ -1.87
PDZRN3-212ENST00000498048 MT1XP80297 61 aa3.34□□□□□ -1.87
PDZRN3-212ENST00000498048 KRTAP10-5P60370 271 aa3.32□□□□□ -1.88
PDZRN3-212ENST00000498048 PRO2289Q9P1D8 64 aa3.32□□□□□ -1.88
PDZRN3-212ENST00000498048 KRTAP2-2Q9BYT5 123 aa3.3□□□□□ -1.88
PDZRN3-212ENST00000498048 MT3P25713 68 aa3.29□□□□□ -1.88
PDZRN3-212ENST00000498048 PP632Q6XCG6 107 aa3.28□□□□□ -1.88
PDZRN3-212ENST00000498048 USH2AO75445 5202 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms