RNA–Protein interactions for RNA: ENST00000497567.1

ATP13A3-210, Transcript of ATPase 13A3, humanhuman

TSL 4

Gene ATP13A3, Length 532 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-210ENST00000497567 ATRQ13535 2644 aa0.25□□□□□ -2.37
ATP13A3-210ENST00000497567 SPTBN4Q9H254 2564 aa0.25□□□□□ -2.37
ATP13A3-210ENST00000497567 EPG5Q9HCE0 2579 aa0.25□□□□□ -2.37
ATP13A3-210ENST00000497567 LRRK2Q5S007 2527 aa0.25□□□□□ -2.37
ATP13A3-210ENST00000497567 ALMS1Q8TCU4 4167 aa0.25□□□□□ -2.37
ATP13A3-210ENST00000497567 ACANP16112 2415 aa0.25□□□□□ -2.37
ATP13A3-210ENST00000497567 AKAP13Q12802 2813 aa0.24□□□□□ -2.37
ATP13A3-210ENST00000497567 ITPR3Q14573 2671 aa0.24□□□□□ -2.37
ATP13A3-210ENST00000497567 ANKRD11Q6UB99 2663 aaPredicted RBP0.24□□□□□ -2.37
ATP13A3-210ENST00000497567 FLNBO75369 2602 aaKnown RBP0.24□□□□□ -2.37
ATP13A3-210ENST00000497567 DOPEY1Q5JWR5 2465 aa0.24□□□□□ -2.37
ATP13A3-210ENST00000497567 REV3LO60673 3130 aa0.24□□□□□ -2.37
ATP13A3-210ENST00000497567 CELSR1Q9NYQ6 3014 aa0.24□□□□□ -2.37
ATP13A3-210ENST00000497567 MKI67P46013 3256 aaKnown RBP0.24□□□□□ -2.37
ATP13A3-210ENST00000497567 SPEGQ15772 3267 aa0.24□□□□□ -2.37
ATP13A3-210ENST00000497567 SPTAN1Q13813 2472 aaKnown RBP0.24□□□□□ -2.37
ATP13A3-210ENST00000497567 HMCN2Q8NDA2 5059 aa0.24□□□□□ -2.37
ATP13A3-210ENST00000497567 RELNP78509 3460 aa0.23□□□□□ -2.37
ATP13A3-210ENST00000497567 UTP20O75691 2785 aaKnown RBP0.23□□□□□ -2.37
ATP13A3-210ENST00000497567 ACACBO00763 2458 aa0.23□□□□□ -2.37
ATP13A3-210ENST00000497567 DSPP15924 2871 aaKnown RBP0.23□□□□□ -2.37
ATP13A3-210ENST00000497567 PKD1L1Q8TDX9 2849 aa0.23□□□□□ -2.37
ATP13A3-210ENST00000497567 DEFB4AO15263 64 aa0.23□□□□□ -2.37
ATP13A3-210ENST00000497567 ITPR1Q14643 2758 aa0.23□□□□□ -2.37
ATP13A3-210ENST00000497567 DNAH12Q6ZR08 3092 aa0.23□□□□□ -2.37
ATP13A3-210ENST00000497567 FASNP49327 2511 aaKnown RBP0.23□□□□□ -2.37
ATP13A3-210ENST00000497567 MGAM2Q2M2H8 2515 aa0.23□□□□□ -2.37
ATP13A3-210ENST00000497567 TLN2Q9Y4G6 2542 aa0.23□□□□□ -2.37
ATP13A3-210ENST00000497567 NBEAQ8NFP9 2946 aa0.23□□□□□ -2.37
ATP13A3-210ENST00000497567 LAMA3Q16787 3333 aa0.23□□□□□ -2.37
ATP13A3-210ENST00000497567 MUC12Q9UKN1 5478 aa0.23□□□□□ -2.37
ATP13A3-210ENST00000497567 SPTBN5Q9NRC6 3674 aaKnown RBP0.23□□□□□ -2.37
ATP13A3-210ENST00000497567 IGSF10Q6WRI0 2623 aa0.22□□□□□ -2.37
ATP13A3-210ENST00000497567 MXRA5Q9NR99 2828 aa0.22□□□□□ -2.37
ATP13A3-210ENST00000497567 TENM2Q9NT68 2774 aa0.22□□□□□ -2.37
ATP13A3-210ENST00000497567 SPRR2DP22532 72 aa0.22□□□□□ -2.37
ATP13A3-210ENST00000497567 SPRR2BP35325 72 aa0.22□□□□□ -2.37
ATP13A3-210ENST00000497567 KRTAP8-1Q8IUC2 63 aa0.22□□□□□ -2.37
ATP13A3-210ENST00000497567 FLNCQ14315 2725 aa0.22□□□□□ -2.37
ATP13A3-210ENST00000497567 MUC3AQ02505 3323 aa0.22□□□□□ -2.37
ATP13A3-210ENST00000497567 UNC80Q8N2C7 3258 aa0.22□□□□□ -2.37
ATP13A3-210ENST00000497567 PRRC2CQ9Y520 2896 aaKnown RBP0.22□□□□□ -2.37
ATP13A3-210ENST00000497567 EP400Q96L91 3159 aa0.22□□□□□ -2.37
ATP13A3-210ENST00000497567 HUWE1Q7Z6Z7 4374 aaKnown RBP0.22□□□□□ -2.37
ATP13A3-210ENST00000497567 USH2AO75445 5202 aa0.21□□□□□ -2.38
ATP13A3-210ENST00000497567 GCN1Q92616 2671 aaKnown RBP0.21□□□□□ -2.38
ATP13A3-210ENST00000497567 NSD1Q96L73 2696 aaPredicted RBP0.21□□□□□ -2.38
ATP13A3-210ENST00000497567 CENPFP49454 3210 aa0.21□□□□□ -2.38
ATP13A3-210ENST00000497567 RANBP2P49792 3224 aaKnown RBP0.21□□□□□ -2.38
ATP13A3-210ENST00000497567 HRNRQ86YZ3 2850 aaPredicted RBP0.21□□□□□ -2.38
ATP13A3-210ENST00000497567 SPRR2AP35326 72 aa0.21□□□□□ -2.38
ATP13A3-210ENST00000497567 COL7A1Q02388 2944 aa0.21□□□□□ -2.38
ATP13A3-210ENST00000497567 ASPMQ8IZT6 3477 aa0.21□□□□□ -2.38
ATP13A3-210ENST00000497567 FAT2Q9NYQ8 4349 aa0.21□□□□□ -2.38
ATP13A3-210ENST00000497567 FLNAP21333 2647 aaKnown RBP0.2□□□□□ -2.38
ATP13A3-210ENST00000497567 DCHS1Q96JQ0 3298 aa0.2□□□□□ -2.38
ATP13A3-210ENST00000497567 KMT2AQ03164 3969 aa0.2□□□□□ -2.38
ATP13A3-210ENST00000497567 HERC2O95714 4834 aa0.2□□□□□ -2.38
ATP13A3-210ENST00000497567 CRYBG3Q68DQ2 2970 aa0.2□□□□□ -2.38
ATP13A3-210ENST00000497567 SRRM2Q9UQ35 2752 aaKnown RBP0.19□□□□□ -2.38
ATP13A3-210ENST00000497567 CFAP54Q96N23 3096 aa0.19□□□□□ -2.38
ATP13A3-210ENST00000497567 LRBAP50851 2863 aa0.19□□□□□ -2.38
ATP13A3-210ENST00000497567 NBEAL1Q6ZS30 2694 aa0.19□□□□□ -2.38
ATP13A3-210ENST00000497567 SMR3BP02814 79 aaPredicted RBP0.19□□□□□ -2.38
ATP13A3-210ENST00000497567 MT1AP04731 61 aa0.19□□□□□ -2.38
ATP13A3-210ENST00000497567 KRTAP6-2Q3LI66 62 aa0.19□□□□□ -2.38
ATP13A3-210ENST00000497567 BRCA2P51587 3418 aa0.19□□□□□ -2.38
ATP13A3-210ENST00000497567 NBPF19A0A087WUL8 3843 aa0.19□□□□□ -2.38
ATP13A3-210ENST00000497567 C5orf42Q9H799 3197 aa0.18□□□□□ -2.38
ATP13A3-210ENST00000497567 USP34Q70CQ2 3546 aa0.18□□□□□ -2.38
ATP13A3-210ENST00000497567 TGP01266 2768 aa0.18□□□□□ -2.38
ATP13A3-210ENST00000497567 USP9YO00507 2555 aaPredicted RBP0.18□□□□□ -2.38
ATP13A3-210ENST00000497567 TNXBP22105 4242 aa0.18□□□□□ -2.38
ATP13A3-210ENST00000497567 NIPBLQ6KC79 2804 aaeCLIP0.18□□□□□ -2.38
ATP13A3-210ENST00000497567 SPRR2EP22531 72 aa0.18□□□□□ -2.38
ATP13A3-210ENST00000497567 SPRR2FQ96RM1 72 aa0.18□□□□□ -2.38
ATP13A3-210ENST00000497567 TEX15Q9BXT5 2789 aa0.18□□□□□ -2.38
ATP13A3-210ENST00000497567 FAT3Q8TDW7 4589 aa0.18□□□□□ -2.38
ATP13A3-210ENST00000497567 STAB2Q8WWQ8 2551 aa0.18□□□□□ -2.38
ATP13A3-210ENST00000497567 HIVEP1P15822 2718 aa0.18□□□□□ -2.38
ATP13A3-210ENST00000497567 LAMA5O15230 3695 aa0.18□□□□□ -2.38
ATP13A3-210ENST00000497567 MYO9AB2RTY4 2548 aa0.18□□□□□ -2.38
ATP13A3-210ENST00000497567 CFAP46Q8IYW2 2715 aa0.17□□□□□ -2.38
ATP13A3-210ENST00000497567 TLN1Q9Y490 2541 aaKnown RBP0.17□□□□□ -2.38
ATP13A3-210ENST00000497567 NF1P21359 2839 aa0.17□□□□□ -2.38
ATP13A3-210ENST00000497567 HTTP42858 3142 aa0.17□□□□□ -2.38
ATP13A3-210ENST00000497567 LAMA1P25391 3075 aa0.17□□□□□ -2.38
ATP13A3-210ENST00000497567 ITPR2Q14571 2701 aa0.16□□□□□ -2.38
ATP13A3-210ENST00000497567 DNAH9Q9NYC9 4486 aa0.16□□□□□ -2.38
ATP13A3-210ENST00000497567 CSMD2Q7Z408 3487 aa0.16□□□□□ -2.38
ATP13A3-210ENST00000497567 CEP295Q9C0D2 2601 aa0.16□□□□□ -2.38
ATP13A3-210ENST00000497567 MGAQ8IWI9 3026 aa0.16□□□□□ -2.38
ATP13A3-210ENST00000497567 UTRNP46939 3433 aa0.16□□□□□ -2.38
ATP13A3-210ENST00000497567 KRTAP19-5Q3LI72 72 aa0.16□□□□□ -2.38
ATP13A3-210ENST00000497567 SPRR2GQ9BYE4 73 aa0.16□□□□□ -2.38
ATP13A3-210ENST00000497567 MYCBP2O75592 4640 aa0.16□□□□□ -2.38
ATP13A3-210ENST00000497567 WDR87Q6ZQQ6 2873 aa0.16□□□□□ -2.38
ATP13A3-210ENST00000497567 DNAH14Q0VDD8 3507 aa0.16□□□□□ -2.38
ATP13A3-210ENST00000497567 DMXL2Q8TDJ6 3036 aa0.16□□□□□ -2.38
ATP13A3-210ENST00000497567 LPAP08519 4548 aa0.15□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms