RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 SERF2P84101 59 aa-0.88□□□□□ -2.55
CLTC-208ENST00000496076 EEA1Q15075 1411 aa-0.89□□□□□ -2.55
CLTC-208ENST00000496076 TLN1Q9Y490 2541 aaKnown RBP-0.89□□□□□ -2.55
CLTC-208ENST00000496076 CELSR3Q9NYQ7 3312 aa-0.89□□□□□ -2.55
CLTC-208ENST00000496076 DEFB1P60022 68 aa-0.89□□□□□ -2.55
CLTC-208ENST00000496076 GLI2P10070 1586 aa-0.9□□□□□ -2.55
CLTC-208ENST00000496076 A0A0C4DFX4 3053 aa-0.9□□□□□ -2.55
CLTC-208ENST00000496076 KRTAP19-5Q3LI72 72 aa-0.9□□□□□ -2.55
CLTC-208ENST00000496076 ABRACLQ9P1F3 81 aa-0.9□□□□□ -2.55
CLTC-208ENST00000496076 CLPSL2Q6UWE3 100 aa-0.91□□□□□ -2.56
CLTC-208ENST00000496076 LINC00308Q8TCZ7 52 aa-0.91□□□□□ -2.56
CLTC-208ENST00000496076 FRYQ5TBA9 3013 aa-0.91□□□□□ -2.56
CLTC-208ENST00000496076 RELNP78509 3460 aa-0.91□□□□□ -2.56
CLTC-208ENST00000496076 DNAH8Q96JB1 4490 aa-0.92□□□□□ -2.56
CLTC-208ENST00000496076 LRBAP50851 2863 aa-0.92□□□□□ -2.56
CLTC-208ENST00000496076 S100ZQ8WXG8 99 aa-0.92□□□□□ -2.56
CLTC-208ENST00000496076 TMEM167BQ9NRX6 74 aa-0.92□□□□□ -2.56
CLTC-208ENST00000496076 KAAG1Q9UBP8 84 aa-0.92□□□□□ -2.56
CLTC-208ENST00000496076 COL12A1Q99715 3063 aa-0.92□□□□□ -2.56
CLTC-208ENST00000496076 C5orf42Q9H799 3197 aa-0.93□□□□□ -2.56
CLTC-208ENST00000496076 M0QY20 66 aa-0.94□□□□□ -2.56
CLTC-208ENST00000496076 MT1HP80294 61 aa-0.94□□□□□ -2.56
CLTC-208ENST00000496076 IGIPA6NJ69 53 aa-0.95□□□□□ -2.56
CLTC-208ENST00000496076 UGGT1Q9NYU2 1555 aa-0.96□□□□□ -2.56
CLTC-208ENST00000496076 MAST1Q9Y2H9 1570 aa-0.96□□□□□ -2.56
CLTC-208ENST00000496076 A0A1B0GUL6 1792 aa-0.96□□□□□ -2.56
CLTC-208ENST00000496076 CHD7Q9P2D1 2997 aa-0.96□□□□□ -2.56
CLTC-208ENST00000496076 TRRAPQ9Y4A5 3859 aa-0.96□□□□□ -2.56
CLTC-208ENST00000496076 ALS2Q96Q42 1657 aa-0.97□□□□□ -2.56
CLTC-208ENST00000496076 ITPR2Q14571 2701 aa-0.97□□□□□ -2.57
CLTC-208ENST00000496076 CPS1P31327 1500 aa-0.98□□□□□ -2.57
CLTC-208ENST00000496076 SMIM27A0A1W2PRY6 76 aa-0.98□□□□□ -2.57
CLTC-208ENST00000496076 SMR3BP02814 79 aaPredicted RBP-0.99□□□□□ -2.57
CLTC-208ENST00000496076 SPENQ96T58 3664 aaKnown RBP-0.99□□□□□ -2.57
CLTC-208ENST00000496076 EFCAB6Q5THR3 1501 aa-0.99□□□□□ -2.57
CLTC-208ENST00000496076 ABCA10Q8WWZ4 1543 aa-0.99□□□□□ -2.57
CLTC-208ENST00000496076 DYNC2H1Q8NCM8 4307 aaKnown RBP-1□□□□□ -2.57
CLTC-208ENST00000496076 SMIM5Q71RC9 77 aa-1□□□□□ -2.57
CLTC-208ENST00000496076 WFDC10BQ8IUB3 73 aa-1□□□□□ -2.57
CLTC-208ENST00000496076 SRCAPQ6ZRS2 3230 aa-1□□□□□ -2.57
CLTC-208ENST00000496076 MT1HL1P0DM35 61 aa-1.01□□□□□ -2.57
CLTC-208ENST00000496076 KRTAP8-1Q8IUC2 63 aa-1.02□□□□□ -2.57
CLTC-208ENST00000496076 ABCA13Q86UQ4 5058 aa-1.03□□□□□ -2.57
CLTC-208ENST00000496076 M0QZ58 72 aa-1.03□□□□□ -2.57
CLTC-208ENST00000496076 CSMD1Q96PZ7 3565 aa-1.03□□□□□ -2.58
CLTC-208ENST00000496076 DYNC1H1Q14204 4646 aaKnown RBP-1.04□□□□□ -2.58
CLTC-208ENST00000496076 MT1XP80297 61 aa-1.04□□□□□ -2.58
CLTC-208ENST00000496076 FAM208AQ9UK61 1670 aaKnown RBP-1.04□□□□□ -2.58
CLTC-208ENST00000496076 EYSQ5T1H1 3165 aa-1.04□□□□□ -2.58
CLTC-208ENST00000496076 SMIM31A0A1B0GVY4 71 aa-1.05□□□□□ -2.58
CLTC-208ENST00000496076 A8MTW9 85 aa-1.05□□□□□ -2.58
CLTC-208ENST00000496076 H0YGX0 51 aa-1.05□□□□□ -2.58
CLTC-208ENST00000496076 SPTBN5Q9NRC6 3674 aaKnown RBP-1.05□□□□□ -2.58
CLTC-208ENST00000496076 DMXL2Q8TDJ6 3036 aa-1.06□□□□□ -2.58
CLTC-208ENST00000496076 PRXQ9BXM0 1461 aa-1.06□□□□□ -2.58
CLTC-208ENST00000496076 SMG1Q96Q15 3661 aaKnown RBP-1.08□□□□□ -2.58
CLTC-208ENST00000496076 ATMQ13315 3056 aa-1.09□□□□□ -2.58
CLTC-208ENST00000496076 KIF21BO75037 1637 aa-1.11□□□□□ -2.59
CLTC-208ENST00000496076 PREX2Q70Z35 1606 aa-1.11□□□□□ -2.59
CLTC-208ENST00000496076 BOD1L1Q8NFC6 3051 aa-1.11□□□□□ -2.59
CLTC-208ENST00000496076 AGLP35573 1532 aa-1.14□□□□□ -2.59
CLTC-208ENST00000496076 DNAH5Q8TE73 4624 aa-1.14□□□□□ -2.59
CLTC-208ENST00000496076 SPART-AS1P0CW21 52 aa-1.14□□□□□ -2.59
CLTC-208ENST00000496076 LINC01546A6NGU7 62 aa-1.15□□□□□ -2.59
CLTC-208ENST00000496076 DNAH17Q9UFH2 4485 aa-1.15□□□□□ -2.59
CLTC-208ENST00000496076 MT1EP04732 61 aa-1.16□□□□□ -2.6
CLTC-208ENST00000496076 TFF3Q07654 80 aa-1.16□□□□□ -2.6
CLTC-208ENST00000496076 KRTAP20-1Q3LI63 56 aa-1.16□□□□□ -2.6
CLTC-208ENST00000496076 ADGRG4Q8IZF6 3080 aa-1.16□□□□□ -2.6
CLTC-208ENST00000496076 LMO7Q8WWI1 1683 aa-1.16□□□□□ -2.6
CLTC-208ENST00000496076 PLNP26678 52 aa-1.17□□□□□ -2.6
CLTC-208ENST00000496076 MT1LQ93083 61 aa-1.17□□□□□ -2.6
CLTC-208ENST00000496076 MT1BP07438 61 aa-1.18□□□□□ -2.6
CLTC-208ENST00000496076 MT1MQ8N339 61 aa-1.18□□□□□ -2.6
CLTC-208ENST00000496076 CSMD2Q7Z408 3487 aa-1.19□□□□□ -2.6
CLTC-208ENST00000496076 MT2AP02795 61 aa-1.19□□□□□ -2.6
CLTC-208ENST00000496076 MT1GP13640 62 aa-1.19□□□□□ -2.6
CLTC-208ENST00000496076 DNAH10Q8IVF4 4471 aa-1.21□□□□□ -2.6
CLTC-208ENST00000496076 MGAQ8IWI9 3026 aa-1.21□□□□□ -2.6
CLTC-208ENST00000496076 SYCP2Q9BX26 1530 aa-1.22□□□□□ -2.6
CLTC-208ENST00000496076 PRUNE2Q8WUY3 3088 aa-1.22□□□□□ -2.61
CLTC-208ENST00000496076 FREM2Q5SZK8 3169 aa-1.22□□□□□ -2.61
CLTC-208ENST00000496076 MROH2AA6NES4 1674 aa-1.23□□□□□ -2.61
CLTC-208ENST00000496076 DEFB131AP59861 70 aa-1.24□□□□□ -2.61
CLTC-208ENST00000496076 ERICH3Q5RHP9 1530 aa-1.25□□□□□ -2.61
CLTC-208ENST00000496076 POLR2KP53803 58 aaKnown RBP-1.26□□□□□ -2.61
CLTC-208ENST00000496076 ABCA5Q8WWZ7 1642 aa-1.26□□□□□ -2.61
CLTC-208ENST00000496076 ZFHX4Q86UP3 3567 aa-1.28□□□□□ -2.61
CLTC-208ENST00000496076 ADCY10Q96PN6 1610 aa-1.29□□□□□ -2.62
CLTC-208ENST00000496076 CRYBG3Q68DQ2 2970 aa-1.3□□□□□ -2.62
CLTC-208ENST00000496076 SMIM2Q9BVW6 85 aa-1.3□□□□□ -2.62
CLTC-208ENST00000496076 CEP250Q9BV73 2442 aa-1.3□□□□□ -2.62
CLTC-208ENST00000496076 DEFB4AO15263 64 aa-1.31□□□□□ -2.62
CLTC-208ENST00000496076 CMC2Q9NRP2 79 aa-1.31□□□□□ -2.62
CLTC-208ENST00000496076 NRXN3Q9Y4C0 1643 aa-1.31□□□□□ -2.62
CLTC-208ENST00000496076 ABCC8Q09428 1581 aa-1.31□□□□□ -2.62
CLTC-208ENST00000496076 CENPEQ02224 2701 aa-1.33□□□□□ -2.62
CLTC-208ENST00000496076 IQGAP1P46940 1657 aa-1.33□□□□□ -2.62
CLTC-208ENST00000496076 DDX60Q8IY21 1712 aaKnown RBP-1.34□□□□□ -2.62
CLTC-208ENST00000496076 DMDP11532 3685 aa-1.34□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms