RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 PKHD1P08F94 4074 aa2.39□□□□□ -2.03
PRKD3-210ENST00000494667 LRP1BQ9NZR2 4599 aa2.39□□□□□ -2.03
PRKD3-210ENST00000494667 FLNBO75369 2602 aaKnown RBP2.38□□□□□ -2.03
PRKD3-210ENST00000494667 PLAC4Q8WY50 150 aa2.38□□□□□ -2.03
PRKD3-210ENST00000494667 STARD9Q9P2P6 4700 aa2.38□□□□□ -2.03
PRKD3-210ENST00000494667 FLG2Q5D862 2391 aaPredicted RBP2.38□□□□□ -2.03
PRKD3-210ENST00000494667 ITPR2Q14571 2701 aa2.37□□□□□ -2.03
PRKD3-210ENST00000494667 TNXBP22105 4242 aa2.37□□□□□ -2.03
PRKD3-210ENST00000494667 A0A0D9SG42 100 aa2.36□□□□□ -2.03
PRKD3-210ENST00000494667 ATRQ13535 2644 aa2.36□□□□□ -2.03
PRKD3-210ENST00000494667 FAT2Q9NYQ8 4349 aa2.36□□□□□ -2.03
PRKD3-210ENST00000494667 APOBP04114 4563 aaKnown RBP2.36□□□□□ -2.03
PRKD3-210ENST00000494667 HSPG2P98160 4391 aa2.35□□□□□ -2.03
PRKD3-210ENST00000494667 PP632Q6XCG6 107 aa2.35□□□□□ -2.03
PRKD3-210ENST00000494667 SPRR5A0A1B0GTR4 108 aa2.34□□□□□ -2.03
PRKD3-210ENST00000494667 LRP1Q07954 4544 aaKnown RBP2.34□□□□□ -2.03
PRKD3-210ENST00000494667 VPS13BQ7Z7G8 4022 aa2.34□□□□□ -2.03
PRKD3-210ENST00000494667 FASNP49327 2511 aaKnown RBP2.33□□□□□ -2.04
PRKD3-210ENST00000494667 KRTAP10-2P60368 255 aa2.33□□□□□ -2.04
PRKD3-210ENST00000494667 KRTAP10-1P60331 282 aa2.33□□□□□ -2.04
PRKD3-210ENST00000494667 CAMK2N1Q7Z7J9 78 aa2.33□□□□□ -2.04
PRKD3-210ENST00000494667 NOTCH1P46531 2555 aa2.32□□□□□ -2.04
PRKD3-210ENST00000494667 KRTAP23-1A1A580 65 aa2.31□□□□□ -2.04
PRKD3-210ENST00000494667 COL6A5A8TX70 2615 aa2.31□□□□□ -2.04
PRKD3-210ENST00000494667 C9orf92A6NGG3 77 aa2.31□□□□□ -2.04
PRKD3-210ENST00000494667 DYNC1H1Q14204 4646 aaKnown RBP2.29□□□□□ -2.04
PRKD3-210ENST00000494667 STAB2Q8WWQ8 2551 aa2.29□□□□□ -2.04
PRKD3-210ENST00000494667 KRTAP10-4P60372 401 aaPredicted RBP2.28□□□□□ -2.04
PRKD3-210ENST00000494667 PRO2289Q9P1D8 64 aa2.28□□□□□ -2.04
PRKD3-210ENST00000494667 FAT3Q8TDW7 4589 aa2.28□□□□□ -2.04
PRKD3-210ENST00000494667 KRTAP10-8P60410 259 aa2.27□□□□□ -2.05
PRKD3-210ENST00000494667 FAT1Q14517 4588 aa2.26□□□□□ -2.05
PRKD3-210ENST00000494667 INE1O15225 51 aa2.23□□□□□ -2.05
PRKD3-210ENST00000494667 MGAM2Q2M2H8 2515 aa2.22□□□□□ -2.05
PRKD3-210ENST00000494667 STAB1Q9NY15 2570 aa2.2□□□□□ -2.06
PRKD3-210ENST00000494667 FLGP20930 4061 aaPredicted RBP2.18□□□□□ -2.06
PRKD3-210ENST00000494667 R4GN34 69 aa2.15□□□□□ -2.06
PRKD3-210ENST00000494667 Q5VSD8 79 aa2.15□□□□□ -2.07
PRKD3-210ENST00000494667 DNHD1Q96M86 4753 aa2.14□□□□□ -2.07
PRKD3-210ENST00000494667 A0A1B0GVY2 172 aa2.13□□□□□ -2.07
PRKD3-210ENST00000494667 HYDINQ4G0P3 5121 aa2.13□□□□□ -2.07
PRKD3-210ENST00000494667 TNP1P09430 55 aa2.09□□□□□ -2.07
PRKD3-210ENST00000494667 DMBT1Q9UGM3 2413 aaPredicted RBP2.09□□□□□ -2.08
PRKD3-210ENST00000494667 HERC1Q15751 4861 aa2.06□□□□□ -2.08
PRKD3-210ENST00000494667 KRTAP4-8Q9BYQ9 185 aa2.05□□□□□ -2.08
PRKD3-210ENST00000494667 SMR3BP02814 79 aaPredicted RBP2.05□□□□□ -2.08
PRKD3-210ENST00000494667 MUC17Q685J3 4493 aa2.04□□□□□ -2.08
PRKD3-210ENST00000494667 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.04□□□□□ -2.08
PRKD3-210ENST00000494667 KRTAP19-2Q3LHN2 52 aa2.03□□□□□ -2.08
PRKD3-210ENST00000494667 KRTAP9-2Q9BYQ4 174 aa2.03□□□□□ -2.09
PRKD3-210ENST00000494667 MT1HL1P0DM35 61 aa2.02□□□□□ -2.09
PRKD3-210ENST00000494667 KRTAP19-4Q3LI73 84 aa2.02□□□□□ -2.09
PRKD3-210ENST00000494667 KRTAP9-6A0A140TA67 174 aa2.01□□□□□ -2.09
PRKD3-210ENST00000494667 LPAP08519 4548 aa2□□□□□ -2.09
PRKD3-210ENST00000494667 KRTAP19-1Q8IUB9 90 aa1.99□□□□□ -2.09
PRKD3-210ENST00000494667 KRTAP8-1Q8IUC2 63 aa1.98□□□□□ -2.09
PRKD3-210ENST00000494667 KRTAP4-12Q9BQ66 201 aa1.98□□□□□ -2.09
PRKD3-210ENST00000494667 RYR2Q92736 4967 aa1.97□□□□□ -2.09
PRKD3-210ENST00000494667 KMT2CQ8NEZ4 4911 aaKnown RBP1.96□□□□□ -2.1
PRKD3-210ENST00000494667 LRP2P98164 4655 aa1.95□□□□□ -2.1
PRKD3-210ENST00000494667 LCE3BQ5TA77 95 aa1.94□□□□□ -2.1
PRKD3-210ENST00000494667 SPRR2GQ9BYE4 73 aa1.94□□□□□ -2.1
PRKD3-210ENST00000494667 KRTAP10-12P60413 245 aa1.93□□□□□ -2.1
PRKD3-210ENST00000494667 KRTAP10-10P60014 251 aa1.93□□□□□ -2.1
PRKD3-210ENST00000494667 LCE4AQ5TA78 99 aa1.93□□□□□ -2.1
PRKD3-210ENST00000494667 KRTAP9-9Q9BYP9 154 aa1.93□□□□□ -2.1
PRKD3-210ENST00000494667 KRTAP9-4Q9BYQ2 154 aa1.93□□□□□ -2.1
PRKD3-210ENST00000494667 RYR1P21817 5038 aa1.92□□□□□ -2.1
PRKD3-210ENST00000494667 LCE3AQ5TA76 89 aa1.92□□□□□ -2.1
PRKD3-210ENST00000494667 KRTAP21-3Q3LHN1 58 aa1.9□□□□□ -2.1
PRKD3-210ENST00000494667 KRTAP4-1Q9BYQ7 146 aa1.9□□□□□ -2.1
PRKD3-210ENST00000494667 KRTAP10-5P60370 271 aa1.89□□□□□ -2.11
PRKD3-210ENST00000494667 KRTAP4-7Q9BYR0 210 aa1.88□□□□□ -2.11
PRKD3-210ENST00000494667 KRTAP4-8A0A0G2JLE6 195 aa1.87□□□□□ -2.11
PRKD3-210ENST00000494667 KRTAP4-2Q9BYR5 136 aa1.87□□□□□ -2.11
PRKD3-210ENST00000494667 RYR3Q15413 4870 aa1.87□□□□□ -2.11
PRKD3-210ENST00000494667 HMCN1Q96RW7 5635 aa1.86□□□□□ -2.11
PRKD3-210ENST00000494667 KRTAP9-7A8MTY7 169 aa1.84□□□□□ -2.11
PRKD3-210ENST00000494667 KRTAP2-3P0C7H8 128 aa1.84□□□□□ -2.11
PRKD3-210ENST00000494667 KRTAP2-4Q9BYR9 128 aa1.84□□□□□ -2.11
PRKD3-210ENST00000494667 KRTAP2-1Q9BYU5 128 aa1.84□□□□□ -2.11
PRKD3-210ENST00000494667 KRTAP12-3P60328 96 aa1.84□□□□□ -2.12
PRKD3-210ENST00000494667 KRTAP19-8Q3LI54 63 aa1.83□□□□□ -2.12
PRKD3-210ENST00000494667 KRTAP4-9Q9BYQ8 210 aa1.79□□□□□ -2.12
PRKD3-210ENST00000494667 LCE1DQ5T752 114 aa1.79□□□□□ -2.12
PRKD3-210ENST00000494667 LCE3CQ5T5A8 94 aa1.78□□□□□ -2.12
PRKD3-210ENST00000494667 BIRC6Q9NR09 4857 aa1.78□□□□□ -2.12
PRKD3-210ENST00000494667 KRTAP5-3Q6L8H2 238 aa1.77□□□□□ -2.13
PRKD3-210ENST00000494667 MT1XP80297 61 aa1.77□□□□□ -2.13
PRKD3-210ENST00000494667 KRTAP10-7P60409 375 aaPredicted RBP1.75□□□□□ -2.13
PRKD3-210ENST00000494667 HMCN2Q8NDA2 5059 aa1.75□□□□□ -2.13
PRKD3-210ENST00000494667 ABCA13Q86UQ4 5058 aa1.75□□□□□ -2.13
PRKD3-210ENST00000494667 KRTAP9-3Q9BYQ3 159 aa1.74□□□□□ -2.13
PRKD3-210ENST00000494667 HERC2O95714 4834 aa1.74□□□□□ -2.13
PRKD3-210ENST00000494667 MT1BP07438 61 aa1.73□□□□□ -2.13
PRKD3-210ENST00000494667 KRTAP19-5Q3LI72 72 aa1.72□□□□□ -2.13
PRKD3-210ENST00000494667 PCLOQ9Y6V0 5065 aa1.72□□□□□ -2.13
PRKD3-210ENST00000494667 KRTAP9-6A8MVA2 160 aa1.7□□□□□ -2.14
PRKD3-210ENST00000494667 LCE5AQ5TCM9 118 aa1.7□□□□□ -2.14
PRKD3-210ENST00000494667 KRTAP4-11Q9BYQ6 195 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms