RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 KLKP1Q107X0 134 aa5.96□□□□□ -1.46
TRA2A-209ENST00000494255 TRAV7A0A075B6U4 112 aa5.95□□□□□ -1.46
TRA2A-209ENST00000494255 KRTAP10-10P60014 251 aa5.95□□□□□ -1.46
TRA2A-209ENST00000494255 MT1FP04733 61 aa5.94□□□□□ -1.46
TRA2A-209ENST00000494255 LCA10Q71F78 164 aa5.93□□□□□ -1.46
TRA2A-209ENST00000494255 A8MUN3 132 aa5.92□□□□□ -1.46
TRA2A-209ENST00000494255 CSAG1Q6PB30 78 aa5.92□□□□□ -1.46
TRA2A-209ENST00000494255 LCE3BQ5TA77 95 aa5.91□□□□□ -1.46
TRA2A-209ENST00000494255 NDUFC1O43677 76 aa5.85□□□□□ -1.47
TRA2A-209ENST00000494255 SERP2Q8N6R1 65 aa5.85□□□□□ -1.47
TRA2A-209ENST00000494255 KRTAP9-3Q9BYQ3 159 aa5.84□□□□□ -1.47
TRA2A-209ENST00000494255 KRTAP4-8A0A0G2JLE6 195 aa5.83□□□□□ -1.48
TRA2A-209ENST00000494255 DMAC1Q96GE9 116 aa5.82□□□□□ -1.48
TRA2A-209ENST00000494255 SNURFQ9Y675 71 aa5.81□□□□□ -1.48
TRA2A-209ENST00000494255 KRTAP5-3Q6L8H2 238 aa5.79□□□□□ -1.48
TRA2A-209ENST00000494255 KRTAP4-12Q9BQ66 201 aa5.79□□□□□ -1.48
TRA2A-209ENST00000494255 CRCT1Q9UGL9 99 aa5.79□□□□□ -1.48
TRA2A-209ENST00000494255 C20orf197Q8N268 126 aa5.79□□□□□ -1.48
TRA2A-209ENST00000494255 KRTAP9-9Q9BYP9 154 aa5.75□□□□□ -1.49
TRA2A-209ENST00000494255 KRTAP9-4Q9BYQ2 154 aa5.75□□□□□ -1.49
TRA2A-209ENST00000494255 ACYP2P14621 99 aa5.75□□□□□ -1.49
TRA2A-209ENST00000494255 COX7CP15954 63 aa5.72□□□□□ -1.49
TRA2A-209ENST00000494255 KRTAP4-7Q9BYR0 210 aa5.72□□□□□ -1.49
TRA2A-209ENST00000494255 H0YAA0 97 aa5.7□□□□□ -1.5
TRA2A-209ENST00000494255 SPANXA2-OT1Q8N9U9 137 aa5.7□□□□□ -1.5
TRA2A-209ENST00000494255 FSIP2Q5CZC0 6907 aa5.7□□□□□ -1.5
TRA2A-209ENST00000494255 CHKB-CPT1BH3BT56 60 aa5.66□□□□□ -1.5
TRA2A-209ENST00000494255 ANAPC13Q9BS18 74 aa5.66□□□□□ -1.5
TRA2A-209ENST00000494255 ADM2Q7Z4H4 148 aa5.66□□□□□ -1.5
TRA2A-209ENST00000494255 SPTSSBQ8NFR3 76 aa5.66□□□□□ -1.5
TRA2A-209ENST00000494255 CRIPTQ9P021 101 aa5.65□□□□□ -1.51
TRA2A-209ENST00000494255 KRTAP19-1Q8IUB9 90 aa5.64□□□□□ -1.51
TRA2A-209ENST00000494255 USH2AO75445 5202 aa5.63□□□□□ -1.51
TRA2A-209ENST00000494255 SPRR2GQ9BYE4 73 aa5.62□□□□□ -1.51
TRA2A-209ENST00000494255 H7BZZ5 65 aa5.57□□□□□ -1.52
TRA2A-209ENST00000494255 Q5VV11 94 aa5.56□□□□□ -1.52
TRA2A-209ENST00000494255 CYSTM1Q9H1C7 97 aa5.56□□□□□ -1.52
TRA2A-209ENST00000494255 KRTAP19-8Q3LI54 63 aa5.54□□□□□ -1.52
TRA2A-209ENST00000494255 P0C880 135 aa5.53□□□□□ -1.52
TRA2A-209ENST00000494255 KRTAP19-6Q3LI70 58 aa5.53□□□□□ -1.52
TRA2A-209ENST00000494255 LCE1DQ5T752 114 aa5.53□□□□□ -1.52
TRA2A-209ENST00000494255 COA5Q86WW8 74 aa5.53□□□□□ -1.52
TRA2A-209ENST00000494255 R4GN34 69 aa5.51□□□□□ -1.53
TRA2A-209ENST00000494255 CCDC179H3BU77 68 aa5.5□□□□□ -1.53
TRA2A-209ENST00000494255 MT1BP07438 61 aa5.5□□□□□ -1.53
TRA2A-209ENST00000494255 SSPOA2VEC9 5147 aa5.5□□□□□ -1.53
TRA2A-209ENST00000494255 KRTAP4-2Q9BYR5 136 aa5.48□□□□□ -1.53
TRA2A-209ENST00000494255 M0QZ58 72 aa5.47□□□□□ -1.53
TRA2A-209ENST00000494255 ATP5EP56381 51 aaPredicted RBP5.41□□□□□ -1.54
TRA2A-209ENST00000494255 FCGBPQ9Y6R7 5405 aaPredicted RBP5.41□□□□□ -1.54
TRA2A-209ENST00000494255 KRTAP4-9Q9BYQ8 210 aa5.4□□□□□ -1.54
TRA2A-209ENST00000494255 A6NN06 94 aa5.4□□□□□ -1.55
TRA2A-209ENST00000494255 SEC61GP60059 68 aa5.39□□□□□ -1.55
TRA2A-209ENST00000494255 LINC01554Q52M75 96 aa5.39□□□□□ -1.55
TRA2A-209ENST00000494255 PLAC4Q8WY50 150 aa5.38□□□□□ -1.55
TRA2A-209ENST00000494255 SERP1Q9Y6X1 66 aa5.37□□□□□ -1.55
TRA2A-209ENST00000494255 KRTAP10-5P60370 271 aa5.34□□□□□ -1.55
TRA2A-209ENST00000494255 TMEM258P61165 79 aa5.34□□□□□ -1.56
TRA2A-209ENST00000494255 PRO2289Q9P1D8 64 aa5.28□□□□□ -1.56
TRA2A-209ENST00000494255 A0A1B0GU69 56 aa5.26□□□□□ -1.57
TRA2A-209ENST00000494255 KRTAP13-4Q3LI77 160 aa5.25□□□□□ -1.57
TRA2A-209ENST00000494255 KRTAP9-7A8MTY7 169 aa5.24□□□□□ -1.57
TRA2A-209ENST00000494255 A0A1B0GU33 70 aa5.24□□□□□ -1.57
TRA2A-209ENST00000494255 MT1XP80297 61 aa5.22□□□□□ -1.57
TRA2A-209ENST00000494255 PRR15LQ9BU68 103 aa5.19□□□□□ -1.58
TRA2A-209ENST00000494255 SPATA8Q6RVD6 105 aa5.18□□□□□ -1.58
TRA2A-209ENST00000494255 MACF1Q9UPN3 7388 aaKnown RBP5.17□□□□□ -1.58
TRA2A-209ENST00000494255 A0A0D9SG42 100 aa5.16□□□□□ -1.58
TRA2A-209ENST00000494255 LINC01558Q9Y6Z2 57 aa5.16□□□□□ -1.58
TRA2A-209ENST00000494255 KRTAP4-11Q9BYQ6 195 aa5.15□□□□□ -1.59
TRA2A-209ENST00000494255 CAMK2N1Q7Z7J9 78 aa5.12□□□□□ -1.59
TRA2A-209ENST00000494255 SMIM26A0A096LP01 95 aa5.11□□□□□ -1.59
TRA2A-209ENST00000494255 KRTAP6-3Q3LI67 103 aa5.11□□□□□ -1.59
TRA2A-209ENST00000494255 PCP4P48539 62 aa5.09□□□□□ -1.59
TRA2A-209ENST00000494255 SPINT4Q6UDR6 99 aa5.08□□□□□ -1.6
TRA2A-209ENST00000494255 H3BS24 57 aa5.08□□□□□ -1.6
TRA2A-209ENST00000494255 KRTAP12-2P59991 146 aa5.06□□□□□ -1.6
TRA2A-209ENST00000494255 SYNE2Q8WXH0 6885 aaKnown RBP5.06□□□□□ -1.6
TRA2A-209ENST00000494255 KRTAP12-1P59990 96 aa5.04□□□□□ -1.6
TRA2A-209ENST00000494255 V9GYY9 64 aa5.03□□□□□ -1.6
TRA2A-209ENST00000494255 A8MU10 97 aa5.02□□□□□ -1.61
TRA2A-209ENST00000494255 UQCR11O14957 56 aa5.01□□□□□ -1.61
TRA2A-209ENST00000494255 KRTAP10-7P60409 375 aaPredicted RBP4.99□□□□□ -1.61
TRA2A-209ENST00000494255 Q1T7F1 81 aa4.97□□□□□ -1.61
TRA2A-209ENST00000494255 KRTAP10-12P60413 245 aa4.96□□□□□ -1.61
TRA2A-209ENST00000494255 KRTAP5-9P26371 169 aa4.96□□□□□ -1.62
TRA2A-209ENST00000494255 KRTAP8-1Q8IUC2 63 aa4.96□□□□□ -1.62
TRA2A-209ENST00000494255 PSPHP1O15172 72 aa4.94□□□□□ -1.62
TRA2A-209ENST00000494255 RPS28P62857 69 aaKnown RBP4.92□□□□□ -1.62
TRA2A-209ENST00000494255 MIR22HGQ0VDD5 57 aa4.91□□□□□ -1.62
TRA2A-209ENST00000494255 SPRR2FQ96RM1 72 aa4.89□□□□□ -1.63
TRA2A-209ENST00000494255 LCE4AQ5TA78 99 aa4.87□□□□□ -1.63
TRA2A-209ENST00000494255 LCE5AQ5TCM9 118 aa4.86□□□□□ -1.63
TRA2A-209ENST00000494255 KMT2DO14686 5537 aa4.86□□□□□ -1.63
TRA2A-209ENST00000494255 K7ERS5 55 aa4.81□□□□□ -1.64
TRA2A-209ENST00000494255 A6NED7 52 aa4.8□□□□□ -1.64
TRA2A-209ENST00000494255 C10orf95Q9H7T3 257 aa4.79□□□□□ -1.64
TRA2A-209ENST00000494255 SPRR2EP22531 72 aa4.77□□□□□ -1.65
TRA2A-209ENST00000494255 SPRR2BP35325 72 aa4.77□□□□□ -1.65
TRA2A-209ENST00000494255 SPRR2AP35326 72 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms