RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 CHKB-CPT1BH3BT56 60 aa7.24□□□□□ -1.25
ACTB-213ENST00000493945 H7BZZ5 65 aa7.24□□□□□ -1.25
ACTB-213ENST00000493945 SPTSSBQ8NFR3 76 aa7.24□□□□□ -1.25
ACTB-213ENST00000493945 ATP5EP56381 51 aaPredicted RBP7.23□□□□□ -1.25
ACTB-213ENST00000493945 KRTAP10-6P60371 365 aaPredicted RBP7.2□□□□□ -1.26
ACTB-213ENST00000493945 LORP23490 312 aaPredicted RBP7.15□□□□□ -1.26
ACTB-213ENST00000493945 TMEM258P61165 79 aa7.15□□□□□ -1.26
ACTB-213ENST00000493945 CYSTM1Q9H1C7 97 aa7.15□□□□□ -1.26
ACTB-213ENST00000493945 KRTAP9-2Q9BYQ4 174 aa7.1□□□□□ -1.27
ACTB-213ENST00000493945 KRTAP9-6A0A140TA67 174 aa7.09□□□□□ -1.27
ACTB-213ENST00000493945 COA5Q86WW8 74 aa7.09□□□□□ -1.27
ACTB-213ENST00000493945 KRTAP3-3Q9BYR6 98 aa7.09□□□□□ -1.27
ACTB-213ENST00000493945 PCP4P48539 62 aa7.07□□□□□ -1.28
ACTB-213ENST00000493945 H0YAA0 97 aa7.05□□□□□ -1.28
ACTB-213ENST00000493945 KRTAP10-10P60014 251 aa7.03□□□□□ -1.28
ACTB-213ENST00000493945 KRTAP9-8Q9BYQ0 159 aa7.02□□□□□ -1.29
ACTB-213ENST00000493945 MT2AP02795 61 aa7□□□□□ -1.29
ACTB-213ENST00000493945 SEC61GP60059 68 aa6.95□□□□□ -1.3
ACTB-213ENST00000493945 MT1FP04733 61 aa6.94□□□□□ -1.3
ACTB-213ENST00000493945 ADM2Q7Z4H4 148 aa6.94□□□□□ -1.3
ACTB-213ENST00000493945 CRIPTQ9P021 101 aa6.94□□□□□ -1.3
ACTB-213ENST00000493945 SERP1Q9Y6X1 66 aa6.9□□□□□ -1.3
ACTB-213ENST00000493945 LCE2DQ5TA82 110 aaPredicted RBP6.88□□□□□ -1.31
ACTB-213ENST00000493945 PRR15LQ9BU68 103 aa6.82□□□□□ -1.32
ACTB-213ENST00000493945 R4GN34 69 aa6.82□□□□□ -1.32
ACTB-213ENST00000493945 A0A1B0GU69 56 aa6.79□□□□□ -1.32
ACTB-213ENST00000493945 KRTAP9-3Q9BYQ3 159 aa6.79□□□□□ -1.32
ACTB-213ENST00000493945 P0C880 135 aa6.77□□□□□ -1.33
ACTB-213ENST00000493945 KRTAP3-2Q9BYR7 98 aa6.75□□□□□ -1.33
ACTB-213ENST00000493945 V9GYY9 64 aa6.75□□□□□ -1.33
ACTB-213ENST00000493945 M0QZ58 72 aa6.74□□□□□ -1.33
ACTB-213ENST00000493945 SPRR2GQ9BYE4 73 aa6.74□□□□□ -1.33
ACTB-213ENST00000493945 LINC01558Q9Y6Z2 57 aa6.7□□□□□ -1.34
ACTB-213ENST00000493945 RPS28P62857 69 aaKnown RBP6.69□□□□□ -1.34
ACTB-213ENST00000493945 SMIM26A0A096LP01 95 aa6.67□□□□□ -1.34
ACTB-213ENST00000493945 Q5VV11 94 aa6.67□□□□□ -1.34
ACTB-213ENST00000493945 KRTAP19-1Q8IUB9 90 aa6.67□□□□□ -1.34
ACTB-213ENST00000493945 A0A1B0GU33 70 aa6.65□□□□□ -1.34
ACTB-213ENST00000493945 LCE2BO14633 110 aa6.63□□□□□ -1.35
ACTB-213ENST00000493945 Q1T7F1 81 aa6.6□□□□□ -1.35
ACTB-213ENST00000493945 KRTAP19-8Q3LI54 63 aa6.6□□□□□ -1.35
ACTB-213ENST00000493945 LINC01554Q52M75 96 aa6.6□□□□□ -1.35
ACTB-213ENST00000493945 CRCT1Q9UGL9 99 aa6.59□□□□□ -1.35
ACTB-213ENST00000493945 PLAC4Q8WY50 150 aa6.57□□□□□ -1.36
ACTB-213ENST00000493945 UQCR11O14957 56 aa6.53□□□□□ -1.36
ACTB-213ENST00000493945 A6NN06 94 aa6.52□□□□□ -1.37
ACTB-213ENST00000493945 PSPHP1O15172 72 aa6.48□□□□□ -1.37
ACTB-213ENST00000493945 MT1BP07438 61 aa6.48□□□□□ -1.37
ACTB-213ENST00000493945 USH2AO75445 5202 aa6.48□□□□□ -1.37
ACTB-213ENST00000493945 KRTAP13-4Q3LI77 160 aa6.47□□□□□ -1.37
ACTB-213ENST00000493945 SPATA8Q6RVD6 105 aa6.47□□□□□ -1.37
ACTB-213ENST00000493945 FSIP2Q5CZC0 6907 aa6.47□□□□□ -1.37
ACTB-213ENST00000493945 A0A0D9SG42 100 aa6.44□□□□□ -1.38
ACTB-213ENST00000493945 PRO2289Q9P1D8 64 aa6.43□□□□□ -1.38
ACTB-213ENST00000493945 KRTAP19-6Q3LI70 58 aa6.41□□□□□ -1.38
ACTB-213ENST00000493945 MIR22HGQ0VDD5 57 aa6.39□□□□□ -1.39
ACTB-213ENST00000493945 A6NED7 52 aa6.38□□□□□ -1.39
ACTB-213ENST00000493945 CAMK2N1Q7Z7J9 78 aa6.37□□□□□ -1.39
ACTB-213ENST00000493945 SPINT4Q6UDR6 99 aa6.36□□□□□ -1.39
ACTB-213ENST00000493945 SSPOA2VEC9 5147 aa6.33□□□□□ -1.4
ACTB-213ENST00000493945 K7ERS5 55 aa6.33□□□□□ -1.4
ACTB-213ENST00000493945 KRTAP9-7A8MTY7 169 aa6.31□□□□□ -1.4
ACTB-213ENST00000493945 A8MU10 97 aa6.3□□□□□ -1.4
ACTB-213ENST00000493945 KRTAP10-5P60370 271 aa6.3□□□□□ -1.4
ACTB-213ENST00000493945 KRTAP12-1P59990 96 aa6.27□□□□□ -1.41
ACTB-213ENST00000493945 KRTAP12-2P59991 146 aa6.22□□□□□ -1.41
ACTB-213ENST00000493945 MT1XP80297 61 aa6.2□□□□□ -1.42
ACTB-213ENST00000493945 CDC42SE1Q9NRR8 79 aa6.17□□□□□ -1.42
ACTB-213ENST00000493945 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.15□□□□□ -1.42
ACTB-213ENST00000493945 FCGBPQ9Y6R7 5405 aaPredicted RBP6.15□□□□□ -1.43
ACTB-213ENST00000493945 BRK1Q8WUW1 75 aa6□□□□□ -1.45
ACTB-213ENST00000493945 TNP1P09430 55 aa5.98□□□□□ -1.45
ACTB-213ENST00000493945 KRTAP10-12P60413 245 aa5.93□□□□□ -1.46
ACTB-213ENST00000493945 C10orf95Q9H7T3 257 aa5.92□□□□□ -1.46
ACTB-213ENST00000493945 MACF1Q9UPN3 7388 aaKnown RBP5.92□□□□□ -1.46
ACTB-213ENST00000493945 KRTAP10-7P60409 375 aaPredicted RBP5.91□□□□□ -1.46
ACTB-213ENST00000493945 KRTAP25-1Q3LHN0 102 aa5.88□□□□□ -1.47
ACTB-213ENST00000493945 ROMO1P60602 79 aa5.85□□□□□ -1.47
ACTB-213ENST00000493945 KRTAP8-1Q8IUC2 63 aa5.85□□□□□ -1.47
ACTB-213ENST00000493945 KRTAP6-3Q3LI67 103 aa5.81□□□□□ -1.48
ACTB-213ENST00000493945 SYNE2Q8WXH0 6885 aaKnown RBP5.77□□□□□ -1.49
ACTB-213ENST00000493945 KRTAP4-8A0A0G2JLE6 195 aa5.73□□□□□ -1.49
ACTB-213ENST00000493945 KRTAP4-8Q9BYQ9 185 aa5.73□□□□□ -1.49
ACTB-213ENST00000493945 SVIPQ8NHG7 77 aa5.72□□□□□ -1.49
ACTB-213ENST00000493945 KRTAP5-9P26371 169 aa5.71□□□□□ -1.5
ACTB-213ENST00000493945 SPRR2FQ96RM1 72 aa5.69□□□□□ -1.5
ACTB-213ENST00000493945 PRO0628Q9UI54 55 aa5.69□□□□□ -1.5
ACTB-213ENST00000493945 KRTAP23-1A1A580 65 aa5.68□□□□□ -1.5
ACTB-213ENST00000493945 PMAIP1Q13794 54 aa5.68□□□□□ -1.5
ACTB-213ENST00000493945 KMT2DO14686 5537 aa5.66□□□□□ -1.5
ACTB-213ENST00000493945 LCE3AQ5TA76 89 aa5.66□□□□□ -1.5
ACTB-213ENST00000493945 PP632Q6XCG6 107 aa5.65□□□□□ -1.5
ACTB-213ENST00000493945 KRTAP19-5Q3LI72 72 aa5.54□□□□□ -1.52
ACTB-213ENST00000493945 KRTAP19-7Q3SYF9 63 aa5.51□□□□□ -1.53
ACTB-213ENST00000493945 SPRR2EP22531 72 aa5.5□□□□□ -1.53
ACTB-213ENST00000493945 SPRR2BP35325 72 aa5.5□□□□□ -1.53
ACTB-213ENST00000493945 SPRR2AP35326 72 aa5.5□□□□□ -1.53
ACTB-213ENST00000493945 KRTAP12-3P60328 96 aa5.5□□□□□ -1.53
ACTB-213ENST00000493945 MT1EP04732 61 aa5.49□□□□□ -1.53
ACTB-213ENST00000493945 KRTAP20-1Q3LI63 56 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms