RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 ASXL1Q8IXJ9 1541 aa-2.45□□□□□ -2.8
SMC4-223ENST00000493695 ABCC6O95255 1503 aa-2.46□□□□□ -2.8
SMC4-223ENST00000493695 CLASP1Q7Z460 1538 aa-2.46□□□□□ -2.8
SMC4-223ENST00000493695 FCER1GP30273 86 aa-2.46□□□□□ -2.8
SMC4-223ENST00000493695 CFAP46Q8IYW2 2715 aa-2.46□□□□□ -2.8
SMC4-223ENST00000493695 MROH1Q8NDA8 1641 aa-2.48□□□□□ -2.81
SMC4-223ENST00000493695 SFTA3P0C7M3 94 aa-2.48□□□□□ -2.81
SMC4-223ENST00000493695 H3BVH4 76 aa-2.49□□□□□ -2.81
SMC4-223ENST00000493695 MT1HL1P0DM35 61 aa-2.5□□□□□ -2.81
SMC4-223ENST00000493695 CDC42BPGQ6DT37 1551 aa-2.5□□□□□ -2.81
SMC4-223ENST00000493695 RRBP1Q9P2E9 1410 aaKnown RBP-2.51□□□□□ -2.81
SMC4-223ENST00000493695 DNMBPQ6XZF7 1577 aa-2.51□□□□□ -2.81
SMC4-223ENST00000493695 A0A1B0GUL6 1792 aa-2.56□□□□□ -2.82
SMC4-223ENST00000493695 CSMD2Q7Z408 3487 aa-2.57□□□□□ -2.82
SMC4-223ENST00000493695 M0QZ58 72 aa-2.57□□□□□ -2.82
SMC4-223ENST00000493695 SMARCA2P51531 1590 aa-2.57□□□□□ -2.82
SMC4-223ENST00000493695 M0QY20 66 aa-2.58□□□□□ -2.82
SMC4-223ENST00000493695 ATXN8Q156A1 80 aa-2.58□□□□□ -2.82
SMC4-223ENST00000493695 MADDQ8WXG6 1647 aa-2.6□□□□□ -2.83
SMC4-223ENST00000493695 TIAM1Q13009 1591 aa-2.62□□□□□ -2.83
SMC4-223ENST00000493695 ABCA9Q8IUA7 1624 aa-2.63□□□□□ -2.83
SMC4-223ENST00000493695 ITPR2Q14571 2701 aa-2.63□□□□□ -2.83
SMC4-223ENST00000493695 IQGAP3Q86VI3 1631 aa-2.64□□□□□ -2.83
SMC4-223ENST00000493695 ABCA13Q86UQ4 5058 aa-2.65□□□□□ -2.83
SMC4-223ENST00000493695 A8MTW9 85 aa-2.65□□□□□ -2.83
SMC4-223ENST00000493695 MT1GP13640 62 aa-2.66□□□□□ -2.84
SMC4-223ENST00000493695 CROCC2H7BZ55 1655 aa-2.66□□□□□ -2.84
SMC4-223ENST00000493695 HILPDAQ9Y5L2 63 aa-2.67□□□□□ -2.84
SMC4-223ENST00000493695 GLI2P10070 1586 aa-2.68□□□□□ -2.84
SMC4-223ENST00000493695 DMXL2Q8TDJ6 3036 aa-2.68□□□□□ -2.84
SMC4-223ENST00000493695 LINC01546A6NGU7 62 aa-2.69□□□□□ -2.84
SMC4-223ENST00000493695 MT1MQ8N339 61 aa-2.72□□□□□ -2.84
SMC4-223ENST00000493695 K7EMI3 77 aa-2.73□□□□□ -2.85
SMC4-223ENST00000493695 UGGT2Q9NYU1 1516 aa-2.73□□□□□ -2.85
SMC4-223ENST00000493695 MT2AP02795 61 aa-2.74□□□□□ -2.85
SMC4-223ENST00000493695 FAM208AQ9UK61 1670 aaKnown RBP-2.75□□□□□ -2.85
SMC4-223ENST00000493695 ZFHX4Q86UP3 3567 aa-2.75□□□□□ -2.85
SMC4-223ENST00000493695 DUOX2Q9NRD8 1548 aa-2.76□□□□□ -2.85
SMC4-223ENST00000493695 GNG13Q9P2W3 67 aa-2.78□□□□□ -2.85
SMC4-223ENST00000493695 ATMQ13315 3056 aa-2.79□□□□□ -2.86
SMC4-223ENST00000493695 PREX2Q70Z35 1606 aa-2.8□□□□□ -2.86
SMC4-223ENST00000493695 KAAG1Q9UBP8 84 aa-2.81□□□□□ -2.86
SMC4-223ENST00000493695 LINC01549A6NIU2 74 aa-2.82□□□□□ -2.86
SMC4-223ENST00000493695 SPART-AS1P0CW21 52 aa-2.82□□□□□ -2.86
SMC4-223ENST00000493695 ALS2Q96Q42 1657 aa-2.82□□□□□ -2.86
SMC4-223ENST00000493695 TLN1Q9Y490 2541 aaKnown RBP-2.83□□□□□ -2.86
SMC4-223ENST00000493695 ABRACLQ9P1F3 81 aa-2.83□□□□□ -2.86
SMC4-223ENST00000493695 ABCA6Q8N139 1617 aa-2.85□□□□□ -2.87
SMC4-223ENST00000493695 M0R1W7 72 aa-2.87□□□□□ -2.87
SMC4-223ENST00000493695 CRYBG3Q68DQ2 2970 aa-2.88□□□□□ -2.87
SMC4-223ENST00000493695 LINC00308Q8TCZ7 52 aa-2.88□□□□□ -2.87
SMC4-223ENST00000493695 TMEM167BQ9NRX6 74 aa-2.88□□□□□ -2.87
SMC4-223ENST00000493695 CFAP54Q96N23 3096 aa-2.89□□□□□ -2.87
SMC4-223ENST00000493695 KIF21BO75037 1637 aa-2.91□□□□□ -2.88
SMC4-223ENST00000493695 SMIM27A0A1W2PRY6 76 aa-2.92□□□□□ -2.88
SMC4-223ENST00000493695 SMCO4Q9NRQ5 59 aa-2.92□□□□□ -2.88
SMC4-223ENST00000493695 VPS13CQ709C8 3753 aa-2.92□□□□□ -2.88
SMC4-223ENST00000493695 EEA1Q15075 1411 aa-2.93□□□□□ -2.88
SMC4-223ENST00000493695 MYO15AQ9UKN7 3530 aa-2.93□□□□□ -2.88
SMC4-223ENST00000493695 PRUNE2Q8WUY3 3088 aa-2.94□□□□□ -2.88
SMC4-223ENST00000493695 PDCD5O14737 125 aa-2.94□□□□□ -2.88
SMC4-223ENST00000493695 FREM2Q5SZK8 3169 aa-2.95□□□□□ -2.88
SMC4-223ENST00000493695 IGIPA6NJ69 53 aa-2.95□□□□□ -2.88
SMC4-223ENST00000493695 MT1BP07438 61 aa-2.95□□□□□ -2.88
SMC4-223ENST00000493695 SERF2P84101 59 aa-2.96□□□□□ -2.88
SMC4-223ENST00000493695 DEFB4AO15263 64 aa-2.98□□□□□ -2.89
SMC4-223ENST00000493695 WFDC10BQ8IUB3 73 aa-2.99□□□□□ -2.89
SMC4-223ENST00000493695 NMES1Q9C002 83 aa-2.99□□□□□ -2.89
SMC4-223ENST00000493695 EFCAB6Q5THR3 1501 aa-3.01□□□□□ -2.89
SMC4-223ENST00000493695 EFCAB5A4FU69 1503 aa-3.03□□□□□ -2.9
SMC4-223ENST00000493695 LEAP2Q969E1 77 aa-3.06□□□□□ -2.9
SMC4-223ENST00000493695 BOD1L1Q8NFC6 3051 aa-3.09□□□□□ -2.9
SMC4-223ENST00000493695 LMO7Q8WWI1 1683 aa-3.09□□□□□ -2.9
SMC4-223ENST00000493695 WDFY3Q8IZQ1 3526 aa-3.1□□□□□ -2.91
SMC4-223ENST00000493695 CCDC180Q9P1Z9 1646 aa-3.11□□□□□ -2.91
SMC4-223ENST00000493695 SCRIBQ14160 1630 aa-3.11□□□□□ -2.91
SMC4-223ENST00000493695 H0YGX0 51 aa-3.14□□□□□ -2.91
SMC4-223ENST00000493695 DEFB131AP59861 70 aa-3.14□□□□□ -2.91
SMC4-223ENST00000493695 DEFB136Q30KP8 78 aa-3.14□□□□□ -2.91
SMC4-223ENST00000493695 POLR2KP53803 58 aaKnown RBP-3.15□□□□□ -2.91
SMC4-223ENST00000493695 KRTAP20-1Q3LI63 56 aa-3.15□□□□□ -2.91
SMC4-223ENST00000493695 UGGT1Q9NYU2 1555 aa-3.17□□□□□ -2.92
SMC4-223ENST00000493695 FRYLO94915 3013 aa-3.17□□□□□ -2.92
SMC4-223ENST00000493695 ABCA10Q8WWZ4 1543 aa-3.19□□□□□ -2.92
SMC4-223ENST00000493695 SYCP2Q9BX26 1530 aa-3.19□□□□□ -2.92
SMC4-223ENST00000493695 A0A087WWC5 75 aa-3.22□□□□□ -2.92
SMC4-223ENST00000493695 S100ZQ8WXG8 99 aa-3.23□□□□□ -2.93
SMC4-223ENST00000493695 MROH2AA6NES4 1674 aa-3.24□□□□□ -2.93
SMC4-223ENST00000493695 AGLP35573 1532 aa-3.26□□□□□ -2.93
SMC4-223ENST00000493695 PCNTO95613 3336 aa-3.27□□□□□ -2.93
SMC4-223ENST00000493695 CPS1P31327 1500 aa-3.28□□□□□ -2.93
SMC4-223ENST00000493695 SZT2Q5T011 3432 aa-3.29□□□□□ -2.94
SMC4-223ENST00000493695 RPS29P62273 56 aaKnown RBP-3.34□□□□□ -2.94
SMC4-223ENST00000493695 ABCA5Q8WWZ7 1642 aa-3.34□□□□□ -2.94
SMC4-223ENST00000493695 TFF3Q07654 80 aa-3.35□□□□□ -2.95
SMC4-223ENST00000493695 DMDP11532 3685 aa-3.37□□□□□ -2.95
SMC4-223ENST00000493695 SPEGQ15772 3267 aa-3.37□□□□□ -2.95
SMC4-223ENST00000493695 PLNP26678 52 aa-3.39□□□□□ -2.95
SMC4-223ENST00000493695 CEP350Q5VT06 3117 aa-3.45□□□□□ -2.96
SMC4-223ENST00000493695 PRXQ9BXM0 1461 aa-3.45□□□□□ -2.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms