RNA–Protein interactions for RNA: ENST00000492582.5

CHKB-212, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-212ENST00000492582 XP32Q5T750 250 aa15.17■□□□□ 0.02
CHKB-212ENST00000492582 HERC2O95714 4834 aa15.16■□□□□ 0.02
CHKB-212ENST00000492582 DMBT1Q9UGM3 2413 aaPredicted RBP15.13■□□□□ 0.01
CHKB-212ENST00000492582 COX6B2Q6YFQ2 88 aa15.1■□□□□ 0.01
CHKB-212ENST00000492582 ABCA13Q86UQ4 5058 aa15.09■□□□□ 0.01
CHKB-212ENST00000492582 SPATA8Q6RVD6 105 aa15□□□□□ -0.01
CHKB-212ENST00000492582 UQCR11O14957 56 aa14.95□□□□□ -0.02
CHKB-212ENST00000492582 MIR22HGQ0VDD5 57 aa14.86□□□□□ -0.03
CHKB-212ENST00000492582 LINC01554Q52M75 96 aa14.84□□□□□ -0.03
CHKB-212ENST00000492582 TPRXLQ17RH7 258 aa14.83□□□□□ -0.03
CHKB-212ENST00000492582 PRAC1Q96KF2 57 aa14.77□□□□□ -0.05
CHKB-212ENST00000492582 PCLOQ9Y6V0 5065 aa14.73□□□□□ -0.05
CHKB-212ENST00000492582 KRTAP3-3Q9BYR6 98 aa14.65□□□□□ -0.06
CHKB-212ENST00000492582 ADM2Q7Z4H4 148 aa14.62□□□□□ -0.07
CHKB-212ENST00000492582 J3QL48 77 aa14.59□□□□□ -0.07
CHKB-212ENST00000492582 A0A1B0GU33 70 aa14.59□□□□□ -0.07
CHKB-212ENST00000492582 S4R3F8 94 aa14.59□□□□□ -0.07
CHKB-212ENST00000492582 H1FX-AS1Q4G0G2 97 aa14.57□□□□□ -0.08
CHKB-212ENST00000492582 H0YAA0 97 aa14.56□□□□□ -0.08
CHKB-212ENST00000492582 LRP2P98164 4655 aa14.52□□□□□ -0.09
CHKB-212ENST00000492582 LPAP08519 4548 aa14.46□□□□□ -0.1
CHKB-212ENST00000492582 CSAG1Q6PB30 78 aa14.38□□□□□ -0.11
CHKB-212ENST00000492582 KRTAP10-6P60371 365 aaPredicted RBP14.37□□□□□ -0.11
CHKB-212ENST00000492582 KRTAP3-2Q9BYR7 98 aa14.32□□□□□ -0.12
CHKB-212ENST00000492582 HERC1Q15751 4861 aa14.31□□□□□ -0.12
CHKB-212ENST00000492582 SEC61BP60468 96 aaKnown RBP14.27□□□□□ -0.13
CHKB-212ENST00000492582 H3BS24 57 aa14.22□□□□□ -0.13
CHKB-212ENST00000492582 P0C880 135 aa14.14□□□□□ -0.15
CHKB-212ENST00000492582 KRTAP13-4Q3LI77 160 aa14.13□□□□□ -0.15
CHKB-212ENST00000492582 KRTAP25-1Q3LHN0 102 aa14.08□□□□□ -0.15
CHKB-212ENST00000492582 KRTAP4-1Q9BYQ7 146 aa14.06□□□□□ -0.16
CHKB-212ENST00000492582 MUC17Q685J3 4493 aa14.01□□□□□ -0.17
CHKB-212ENST00000492582 HMCN2Q8NDA2 5059 aa14.01□□□□□ -0.17
CHKB-212ENST00000492582 K7ERS5 55 aa13.97□□□□□ -0.17
CHKB-212ENST00000492582 A0A0D9SG42 100 aa13.92□□□□□ -0.18
CHKB-212ENST00000492582 ROMO1P60602 79 aa13.89□□□□□ -0.19
CHKB-212ENST00000492582 KRTAP19-2Q3LHN2 52 aa13.79□□□□□ -0.2
CHKB-212ENST00000492582 M0QZ58 72 aa13.73□□□□□ -0.21
CHKB-212ENST00000492582 KRTAP12-2P59991 146 aa13.62□□□□□ -0.23
CHKB-212ENST00000492582 KRTAP12-1P59990 96 aa13.59□□□□□ -0.23
CHKB-212ENST00000492582 SPINT4Q6UDR6 99 aa13.51□□□□□ -0.25
CHKB-212ENST00000492582 MUC2Q02817 5179 aa13.48□□□□□ -0.25
CHKB-212ENST00000492582 UBR4Q5T4S7 5183 aa13.48□□□□□ -0.25
CHKB-212ENST00000492582 R4GN34 69 aa13.48□□□□□ -0.25
CHKB-212ENST00000492582 LORP23490 312 aaPredicted RBP13.43□□□□□ -0.26
CHKB-212ENST00000492582 CRIPTQ9P021 101 aa13.37□□□□□ -0.27
CHKB-212ENST00000492582 RNF213Q63HN8 5207 aa13.29□□□□□ -0.28
CHKB-212ENST00000492582 FLGP20930 4061 aaPredicted RBP13.23□□□□□ -0.29
CHKB-212ENST00000492582 LCE2CQ5TA81 110 aa13.14□□□□□ -0.31
CHKB-212ENST00000492582 C10orf95Q9H7T3 257 aa13.03□□□□□ -0.32
CHKB-212ENST00000492582 KRTAP15-1Q3LI76 137 aa12.98□□□□□ -0.33
CHKB-212ENST00000492582 FAT4Q6V0I7 4981 aa12.9□□□□□ -0.34
CHKB-212ENST00000492582 MT1HP80294 61 aa12.82□□□□□ -0.36
CHKB-212ENST00000492582 M0R2T5 61 aa12.74□□□□□ -0.37
CHKB-212ENST00000492582 NDUFAF8A1L188 74 aa12.74□□□□□ -0.37
CHKB-212ENST00000492582 CAMK2N1Q7Z7J9 78 aa12.72□□□□□ -0.37
CHKB-212ENST00000492582 SPRR2GQ9BYE4 73 aa12.6□□□□□ -0.39
CHKB-212ENST00000492582 KRTAP19-1Q8IUB9 90 aa12.53□□□□□ -0.4
CHKB-212ENST00000492582 MT2AP02795 61 aa12.5□□□□□ -0.41
CHKB-212ENST00000492582 MT1FP04733 61 aa12.47□□□□□ -0.41
CHKB-212ENST00000492582 KRTAP9-8Q9BYQ0 159 aa12.46□□□□□ -0.41
CHKB-212ENST00000492582 KRTAP10-10P60014 251 aa12.41□□□□□ -0.42
CHKB-212ENST00000492582 PLAC4Q8WY50 150 aa12.33□□□□□ -0.44
CHKB-212ENST00000492582 LCE2AQ5TA79 106 aaPredicted RBP12.3□□□□□ -0.44
CHKB-212ENST00000492582 PP632Q6XCG6 107 aa12.25□□□□□ -0.45
CHKB-212ENST00000492582 TNP1P09430 55 aa12.21□□□□□ -0.45
CHKB-212ENST00000492582 KRTAP19-8Q3LI54 63 aa12.14□□□□□ -0.47
CHKB-212ENST00000492582 KRTAP23-1A1A580 65 aa12.01□□□□□ -0.49
CHKB-212ENST00000492582 MT1BP07438 61 aa11.97□□□□□ -0.49
CHKB-212ENST00000492582 KRTAP9-3Q9BYQ3 159 aa11.97□□□□□ -0.49
CHKB-212ENST00000492582 LUZP6Q538Z0 58 aa11.85□□□□□ -0.51
CHKB-212ENST00000492582 A0A0A0MQY5 61 aa11.76□□□□□ -0.53
CHKB-212ENST00000492582 KRTAP10-5P60370 271 aa11.76□□□□□ -0.53
CHKB-212ENST00000492582 MT1XP80297 61 aa11.76□□□□□ -0.53
CHKB-212ENST00000492582 LCE3AQ5TA76 89 aa11.63□□□□□ -0.55
CHKB-212ENST00000492582 LCE2BO14633 110 aa11.54□□□□□ -0.56
CHKB-212ENST00000492582 PRO2289Q9P1D8 64 aa11.42□□□□□ -0.58
CHKB-212ENST00000492582 KRTAP8-1Q8IUC2 63 aa11.38□□□□□ -0.59
CHKB-212ENST00000492582 KRTAP10-12P60413 245 aa11.37□□□□□ -0.59
CHKB-212ENST00000492582 KRTAP10-7P60409 375 aaPredicted RBP11.36□□□□□ -0.59
CHKB-212ENST00000492582 SPRR5A0A1B0GTR4 108 aa11.32□□□□□ -0.6
CHKB-212ENST00000492582 USH2AO75445 5202 aa11.27□□□□□ -0.61
CHKB-212ENST00000492582 LCE2DQ5TA82 110 aaPredicted RBP11.18□□□□□ -0.62
CHKB-212ENST00000492582 KRTAP12-3P60328 96 aa11.1□□□□□ -0.63
CHKB-212ENST00000492582 FSIP2Q5CZC0 6907 aa11.04□□□□□ -0.64
CHKB-212ENST00000492582 SSPOA2VEC9 5147 aa10.95□□□□□ -0.66
CHKB-212ENST00000492582 KRTAP9-2Q9BYQ4 174 aa10.91□□□□□ -0.66
CHKB-212ENST00000492582 KRTAP19-5Q3LI72 72 aa10.81□□□□□ -0.68
CHKB-212ENST00000492582 KRTAP4-8A0A0G2JLE6 195 aa10.75□□□□□ -0.69
CHKB-212ENST00000492582 KRTAP4-8Q9BYQ9 185 aa10.75□□□□□ -0.69
CHKB-212ENST00000492582 KRTAP19-6Q3LI70 58 aa10.73□□□□□ -0.69
CHKB-212ENST00000492582 INE1O15225 51 aa10.63□□□□□ -0.71
CHKB-212ENST00000492582 KMT2DO14686 5537 aa10.57□□□□□ -0.72
CHKB-212ENST00000492582 FCGBPQ9Y6R7 5405 aaPredicted RBP10.53□□□□□ -0.72
CHKB-212ENST00000492582 KRTAP19-7Q3SYF9 63 aa10.49□□□□□ -0.73
CHKB-212ENST00000492582 CRCT1Q9UGL9 99 aa10.47□□□□□ -0.73
CHKB-212ENST00000492582 LCE3CQ5T5A8 94 aa10.43□□□□□ -0.74
CHKB-212ENST00000492582 MT1EP04732 61 aa10.23□□□□□ -0.77
CHKB-212ENST00000492582 MT1LQ93083 61 aa10.15□□□□□ -0.78
CHKB-212ENST00000492582 KRTAP19-4Q3LI73 84 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms